Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:02079:02105
Extra
PDB:
ATOM 1 O3' C A2078 108.781 110.231 31.866 1.00 58.00 O
ATOM 2 P U A2079 110.196 110.300 31.106 1.00 61.80 P
ATOM 3 OP1 U A2079 111.039 111.319 31.776 1.00 62.20 O
ATOM 4 OP2 U A2079 109.922 110.419 29.651 1.00 62.65 O
ATOM 5 O5' U A2079 110.886 108.887 31.333 1.00 58.84 O
ATOM 6 C5' U A2079 112.024 108.521 30.544 1.00 57.85 C
ATOM 7 C4' U A2079 112.872 107.516 31.276 1.00 57.72 C
ATOM 8 O4' U A2079 113.397 108.129 32.483 1.00 56.75 O
ATOM 9 C3' U A2079 112.173 106.231 31.716 1.00 58.39 C
ATOM 10 O3' U A2079 113.102 105.149 31.646 1.00 62.76 O
ATOM 11 C2' U A2079 111.870 106.512 33.186 1.00 57.11 C
ATOM 12 O2' U A2079 111.775 105.334 33.966 1.00 58.35 O
ATOM 13 C1' U A2079 113.116 107.295 33.582 1.00 55.53 C
ATOM 14 N1 U A2079 113.022 108.111 34.800 1.00 52.82 N
ATOM 15 C2 U A2079 113.561 107.581 35.957 1.00 52.89 C
ATOM 16 O2 U A2079 114.047 106.462 36.014 1.00 54.30 O
ATOM 17 N3 U A2079 113.513 108.406 37.049 1.00 51.60 N
ATOM 18 C4 U A2079 112.974 109.666 37.111 1.00 51.69 C
ATOM 19 O4 U A2079 113.020 110.285 38.171 1.00 53.71 O
ATOM 20 C5 U A2079 112.399 110.132 35.888 1.00 51.85 C
ATOM 21 C6 U A2079 112.444 109.358 34.800 1.00 53.07 C
ATOM 22 P G A2080 113.395 104.424 30.237 1.00 65.85 P
ATOM 23 OP1 G A2080 112.273 104.731 29.289 1.00 61.23 O
ATOM 24 OP2 G A2080 113.732 103.008 30.541 1.00 63.77 O
ATOM 25 O5' G A2080 114.730 105.140 29.727 1.00 65.80 O
TER
ATOM 1 O3' A B2104 116.651 107.589 38.739 1.00 62.13 O
ATOM 2 P C B2105 115.820 106.481 39.563 1.00 61.21 P
ATOM 3 OP1 C B2105 116.554 105.182 39.542 1.00 61.30 O
ATOM 4 OP2 C B2105 114.416 106.536 39.077 1.00 59.63 O
ATOM 5 O5' C B2105 115.825 107.060 41.049 1.00 60.57 O
ATOM 6 C5' C B2105 116.875 106.734 41.979 1.00 57.50 C
ATOM 7 C4' C B2105 117.332 107.973 42.722 1.00 56.22 C
ATOM 8 O4' C B2105 117.944 108.903 41.787 1.00 55.63 O
ATOM 9 C3' C B2105 116.262 108.834 43.374 1.00 56.25 C
ATOM 10 O3' C B2105 115.763 108.306 44.604 1.00 55.18 O
ATOM 11 C2' C B2105 117.014 110.143 43.588 1.00 55.56 C
ATOM 12 O2' C B2105 117.886 110.096 44.698 1.00 57.90 O
ATOM 13 C1' C B2105 117.855 110.218 42.314 1.00 54.69 C
ATOM 14 N1 C B2105 117.297 111.133 41.297 1.00 53.07 N
ATOM 15 C2 C B2105 117.424 112.517 41.509 1.00 52.53 C
ATOM 16 O2 C B2105 117.995 112.920 42.537 1.00 54.56 O
ATOM 17 N3 C B2105 116.926 113.378 40.595 1.00 49.48 N
ATOM 18 C4 C B2105 116.325 112.914 39.503 1.00 49.47 C
ATOM 19 N4 C B2105 115.861 113.808 38.632 1.00 46.31 N
ATOM 20 C5 C B2105 116.174 111.511 39.258 1.00 50.10 C
ATOM 21 C6 C B2105 116.670 110.665 40.173 1.00 51.27 C
ATOM 22 P A B2106 114.270 108.686 45.085 1.00 53.30 P
ATOM 23 OP1 A B2106 114.089 108.140 46.452 1.00 56.10 O
ATOM 24 OP2 A B2106 113.309 108.323 44.020 1.00 51.57 O
ATOM 25 O5' A B2106 114.279 110.275 45.196 1.00 55.24 O
TER
ATOM 2 P U A2079 110.196 110.300 31.106 1.00 61.80 P
ATOM 3 OP1 U A2079 111.039 111.319 31.776 1.00 62.20 O
ATOM 4 OP2 U A2079 109.922 110.419 29.651 1.00 62.65 O
ATOM 5 O5' U A2079 110.886 108.887 31.333 1.00 58.84 O
ATOM 6 C5' U A2079 112.024 108.521 30.544 1.00 57.85 C
ATOM 7 C4' U A2079 112.872 107.516 31.276 1.00 57.72 C
ATOM 8 O4' U A2079 113.397 108.129 32.483 1.00 56.75 O
ATOM 9 C3' U A2079 112.173 106.231 31.716 1.00 58.39 C
ATOM 10 O3' U A2079 113.102 105.149 31.646 1.00 62.76 O
ATOM 11 C2' U A2079 111.870 106.512 33.186 1.00 57.11 C
ATOM 12 O2' U A2079 111.775 105.334 33.966 1.00 58.35 O
ATOM 13 C1' U A2079 113.116 107.295 33.582 1.00 55.53 C
ATOM 14 N1 U A2079 113.022 108.111 34.800 1.00 52.82 N
ATOM 15 C2 U A2079 113.561 107.581 35.957 1.00 52.89 C
ATOM 16 O2 U A2079 114.047 106.462 36.014 1.00 54.30 O
ATOM 17 N3 U A2079 113.513 108.406 37.049 1.00 51.60 N
ATOM 18 C4 U A2079 112.974 109.666 37.111 1.00 51.69 C
ATOM 19 O4 U A2079 113.020 110.285 38.171 1.00 53.71 O
ATOM 20 C5 U A2079 112.399 110.132 35.888 1.00 51.85 C
ATOM 21 C6 U A2079 112.444 109.358 34.800 1.00 53.07 C
ATOM 22 P G A2080 113.395 104.424 30.237 1.00 65.85 P
ATOM 23 OP1 G A2080 112.273 104.731 29.289 1.00 61.23 O
ATOM 24 OP2 G A2080 113.732 103.008 30.541 1.00 63.77 O
ATOM 25 O5' G A2080 114.730 105.140 29.727 1.00 65.80 O
TER
ATOM 1 O3' A B2104 116.651 107.589 38.739 1.00 62.13 O
ATOM 2 P C B2105 115.820 106.481 39.563 1.00 61.21 P
ATOM 3 OP1 C B2105 116.554 105.182 39.542 1.00 61.30 O
ATOM 4 OP2 C B2105 114.416 106.536 39.077 1.00 59.63 O
ATOM 5 O5' C B2105 115.825 107.060 41.049 1.00 60.57 O
ATOM 6 C5' C B2105 116.875 106.734 41.979 1.00 57.50 C
ATOM 7 C4' C B2105 117.332 107.973 42.722 1.00 56.22 C
ATOM 8 O4' C B2105 117.944 108.903 41.787 1.00 55.63 O
ATOM 9 C3' C B2105 116.262 108.834 43.374 1.00 56.25 C
ATOM 10 O3' C B2105 115.763 108.306 44.604 1.00 55.18 O
ATOM 11 C2' C B2105 117.014 110.143 43.588 1.00 55.56 C
ATOM 12 O2' C B2105 117.886 110.096 44.698 1.00 57.90 O
ATOM 13 C1' C B2105 117.855 110.218 42.314 1.00 54.69 C
ATOM 14 N1 C B2105 117.297 111.133 41.297 1.00 53.07 N
ATOM 15 C2 C B2105 117.424 112.517 41.509 1.00 52.53 C
ATOM 16 O2 C B2105 117.995 112.920 42.537 1.00 54.56 O
ATOM 17 N3 C B2105 116.926 113.378 40.595 1.00 49.48 N
ATOM 18 C4 C B2105 116.325 112.914 39.503 1.00 49.47 C
ATOM 19 N4 C B2105 115.861 113.808 38.632 1.00 46.31 N
ATOM 20 C5 C B2105 116.174 111.511 39.258 1.00 50.10 C
ATOM 21 C6 C B2105 116.670 110.665 40.173 1.00 51.27 C
ATOM 22 P A B2106 114.270 108.686 45.085 1.00 53.30 P
ATOM 23 OP1 A B2106 114.089 108.140 46.452 1.00 56.10 O
ATOM 24 OP2 A B2106 113.309 108.323 44.020 1.00 51.57 O
ATOM 25 O5' A B2106 114.279 110.275 45.196 1.00 55.24 O
TER
Atoms:
C4: (112.974,109.666,37.111)
N3: (113.513,108.406,37.049)
OP1: (111.039,111.319,31.776)
OP2: (109.922,110.419,29.651)
C2: (113.561,107.581,35.957)
C1': (113.116,107.295,33.582)
C3': (112.173,106.231,31.716)
O5': (110.886,108.887,31.333)
O4': (113.397,108.129,32.483)
C5': (112.024,108.521,30.544)
P: (110.196,110.300,31.106)
C4': (112.872,107.516,31.276)
C2': (111.870,106.512,33.186)
O2': (111.775,105.334,33.966)
N1: (113.022,108.111,34.800)
O4: (113.020,110.285,38.171)
O2: (114.047,106.462,36.014)
C6: (112.444,109.358,34.800)
C5: (112.399,110.132,35.888)
O3': (113.102,105.149,31.646)
N3: (113.513,108.406,37.049)
OP1: (111.039,111.319,31.776)
OP2: (109.922,110.419,29.651)
C2: (113.561,107.581,35.957)
C1': (113.116,107.295,33.582)
C3': (112.173,106.231,31.716)
O5': (110.886,108.887,31.333)
O4': (113.397,108.129,32.483)
C5': (112.024,108.521,30.544)
P: (110.196,110.300,31.106)
C4': (112.872,107.516,31.276)
C2': (111.870,106.512,33.186)
O2': (111.775,105.334,33.966)
N1: (113.022,108.111,34.800)
O4: (113.020,110.285,38.171)
O2: (114.047,106.462,36.014)
C6: (112.444,109.358,34.800)
C5: (112.399,110.132,35.888)
O3': (113.102,105.149,31.646)
C2: (117.424,112.517,41.509)
OP1: (116.554,105.182,39.542)
OP2: (114.416,106.536,39.077)
C4: (116.325,112.914,39.503)
O5': (115.825,107.060,41.049)
C3': (116.262,108.834,43.374)
C1': (117.855,110.218,42.314)
O4': (117.944,108.903,41.787)
C5': (116.875,106.734,41.979)
P: (115.820,106.481,39.563)
O2: (117.995,112.920,42.537)
C4': (117.332,107.973,42.722)
C2': (117.014,110.143,43.588)
O2': (117.886,110.096,44.698)
N1: (117.297,111.133,41.297)
N3: (116.926,113.378,40.595)
N4: (115.861,113.808,38.632)
C6: (116.670,110.665,40.173)
C5: (116.174,111.511,39.258)
O3': (115.763,108.306,44.604)
OP1: (116.554,105.182,39.542)
OP2: (114.416,106.536,39.077)
C4: (116.325,112.914,39.503)
O5': (115.825,107.060,41.049)
C3': (116.262,108.834,43.374)
C1': (117.855,110.218,42.314)
O4': (117.944,108.903,41.787)
C5': (116.875,106.734,41.979)
P: (115.820,106.481,39.563)
O2: (117.995,112.920,42.537)
C4': (117.332,107.973,42.722)
C2': (117.014,110.143,43.588)
O2': (117.886,110.096,44.698)
N1: (117.297,111.133,41.297)
N3: (116.926,113.378,40.595)
N4: (115.861,113.808,38.632)
C6: (116.670,110.665,40.173)
C5: (116.174,111.511,39.258)
O3': (115.763,108.306,44.604)
Image (generated by PyMOL):