Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:185:1278
Extra
PDB:
ATOM 1 O3' U A 84 54.713 -48.807 91.397 1.00 35.70 O
ATOM 2 P A A 85 53.141 -49.145 91.524 1.00 37.97 P
ATOM 3 OP1 A A 85 52.879 -50.296 90.639 1.00 38.11 O
ATOM 4 OP2 A A 85 52.424 -47.896 91.291 1.00 37.57 O
ATOM 5 O5' A A 85 52.947 -49.585 93.040 1.00 38.32 O
ATOM 6 C5' A A 85 52.786 -50.942 93.381 1.00 38.71 C
ATOM 7 C4' A A 85 52.333 -51.087 94.801 1.00 38.95 C
ATOM 8 O4' A A 85 53.067 -50.165 95.628 1.00 38.93 O
ATOM 9 C3' A A 85 50.915 -50.723 95.082 1.00 38.80 C
ATOM 10 O3' A A 85 50.019 -51.729 94.718 1.00 38.93 O
ATOM 11 C2' A A 85 50.943 -50.442 96.574 1.00 39.00 C
ATOM 12 O2' A A 85 51.016 -51.648 97.308 1.00 39.46 O
ATOM 13 C1' A A 85 52.275 -49.743 96.706 1.00 38.96 C
ATOM 14 N9 A A 85 52.151 -48.295 96.623 1.00 38.58 N
ATOM 15 C8 A A 85 52.575 -47.595 95.537 1.00 38.24 C
ATOM 16 N7 A A 85 52.385 -46.319 95.687 1.00 37.95 N
ATOM 17 C5 A A 85 51.816 -46.210 96.926 1.00 38.12 C
ATOM 18 C6 A A 85 51.427 -45.087 97.600 1.00 37.97 C
ATOM 19 N6 A A 85 51.564 -43.888 97.033 1.00 37.61 N
ATOM 20 N1 A A 85 50.886 -45.290 98.832 1.00 38.22 N
ATOM 21 C2 A A 85 50.791 -46.540 99.324 1.00 38.60 C
ATOM 22 N3 A A 85 51.148 -47.671 98.749 1.00 38.77 N
ATOM 23 C4 A A 85 51.656 -47.422 97.542 1.00 38.51 C
ATOM 24 P A A 86 48.836 -51.389 93.696 1.00 38.31 P
ATOM 25 OP1 A A 86 48.060 -52.651 93.524 1.00 38.56 O
ATOM 26 OP2 A A 86 49.440 -50.765 92.491 1.00 37.99 O
ATOM 27 O5' A A 86 47.978 -50.293 94.494 1.00 38.11 O
TER
ATOM 1 O3' U B 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 2 P G B 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 3 OP1 G B 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 4 OP2 G B 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 5 O5' G B 278 46.969 -39.797 100.254 1.00 42.24 O
ATOM 6 C5' G B 278 46.948 -40.054 98.867 1.00 41.99 C
ATOM 7 C4' G B 278 46.978 -41.518 98.615 1.00 42.22 C
ATOM 8 O4' G B 278 48.301 -42.025 98.937 1.00 42.47 O
ATOM 9 C3' G B 278 46.068 -42.297 99.501 1.00 42.51 C
ATOM 10 O3' G B 278 44.757 -42.309 99.007 1.00 42.35 O
ATOM 11 C2' G B 278 46.737 -43.666 99.563 1.00 42.84 C
ATOM 12 O2' G B 278 46.468 -44.374 98.392 1.00 42.74 O
ATOM 13 C1' G B 278 48.203 -43.304 99.527 1.00 42.84 C
ATOM 14 N9 G B 278 48.854 -43.269 100.852 1.00 43.16 N
ATOM 15 C8 G B 278 49.422 -42.160 101.417 1.00 43.10 C
ATOM 16 N7 G B 278 50.012 -42.330 102.576 1.00 43.43 N
ATOM 17 C5 G B 278 49.875 -43.697 102.771 1.00 43.75 C
ATOM 18 C6 G B 278 50.326 -44.538 103.842 1.00 44.21 C
ATOM 19 O6 G B 278 50.956 -44.192 104.846 1.00 44.43 O
ATOM 20 N1 G B 278 49.934 -45.873 103.687 1.00 44.44 N
ATOM 21 C2 G B 278 49.215 -46.284 102.591 1.00 44.22 C
ATOM 22 N2 G B 278 48.870 -47.568 102.491 1.00 44.47 N
ATOM 23 N3 G B 278 48.840 -45.520 101.586 1.00 43.80 N
ATOM 24 C4 G B 278 49.179 -44.256 101.715 1.00 43.58 C
ATOM 25 P G B 279 43.505 -42.356 100.014 1.00 39.19 P
ATOM 26 OP1 G B 279 42.357 -42.740 99.225 1.00 39.06 O
ATOM 27 OP2 G B 279 43.463 -41.089 100.790 1.00 39.10 O
ATOM 28 O5' G B 279 43.897 -43.542 100.936 1.00 39.64 O
TER
ATOM 2 P A A 85 53.141 -49.145 91.524 1.00 37.97 P
ATOM 3 OP1 A A 85 52.879 -50.296 90.639 1.00 38.11 O
ATOM 4 OP2 A A 85 52.424 -47.896 91.291 1.00 37.57 O
ATOM 5 O5' A A 85 52.947 -49.585 93.040 1.00 38.32 O
ATOM 6 C5' A A 85 52.786 -50.942 93.381 1.00 38.71 C
ATOM 7 C4' A A 85 52.333 -51.087 94.801 1.00 38.95 C
ATOM 8 O4' A A 85 53.067 -50.165 95.628 1.00 38.93 O
ATOM 9 C3' A A 85 50.915 -50.723 95.082 1.00 38.80 C
ATOM 10 O3' A A 85 50.019 -51.729 94.718 1.00 38.93 O
ATOM 11 C2' A A 85 50.943 -50.442 96.574 1.00 39.00 C
ATOM 12 O2' A A 85 51.016 -51.648 97.308 1.00 39.46 O
ATOM 13 C1' A A 85 52.275 -49.743 96.706 1.00 38.96 C
ATOM 14 N9 A A 85 52.151 -48.295 96.623 1.00 38.58 N
ATOM 15 C8 A A 85 52.575 -47.595 95.537 1.00 38.24 C
ATOM 16 N7 A A 85 52.385 -46.319 95.687 1.00 37.95 N
ATOM 17 C5 A A 85 51.816 -46.210 96.926 1.00 38.12 C
ATOM 18 C6 A A 85 51.427 -45.087 97.600 1.00 37.97 C
ATOM 19 N6 A A 85 51.564 -43.888 97.033 1.00 37.61 N
ATOM 20 N1 A A 85 50.886 -45.290 98.832 1.00 38.22 N
ATOM 21 C2 A A 85 50.791 -46.540 99.324 1.00 38.60 C
ATOM 22 N3 A A 85 51.148 -47.671 98.749 1.00 38.77 N
ATOM 23 C4 A A 85 51.656 -47.422 97.542 1.00 38.51 C
ATOM 24 P A A 86 48.836 -51.389 93.696 1.00 38.31 P
ATOM 25 OP1 A A 86 48.060 -52.651 93.524 1.00 38.56 O
ATOM 26 OP2 A A 86 49.440 -50.765 92.491 1.00 37.99 O
ATOM 27 O5' A A 86 47.978 -50.293 94.494 1.00 38.11 O
TER
ATOM 1 O3' U B 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 2 P G B 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 3 OP1 G B 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 4 OP2 G B 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 5 O5' G B 278 46.969 -39.797 100.254 1.00 42.24 O
ATOM 6 C5' G B 278 46.948 -40.054 98.867 1.00 41.99 C
ATOM 7 C4' G B 278 46.978 -41.518 98.615 1.00 42.22 C
ATOM 8 O4' G B 278 48.301 -42.025 98.937 1.00 42.47 O
ATOM 9 C3' G B 278 46.068 -42.297 99.501 1.00 42.51 C
ATOM 10 O3' G B 278 44.757 -42.309 99.007 1.00 42.35 O
ATOM 11 C2' G B 278 46.737 -43.666 99.563 1.00 42.84 C
ATOM 12 O2' G B 278 46.468 -44.374 98.392 1.00 42.74 O
ATOM 13 C1' G B 278 48.203 -43.304 99.527 1.00 42.84 C
ATOM 14 N9 G B 278 48.854 -43.269 100.852 1.00 43.16 N
ATOM 15 C8 G B 278 49.422 -42.160 101.417 1.00 43.10 C
ATOM 16 N7 G B 278 50.012 -42.330 102.576 1.00 43.43 N
ATOM 17 C5 G B 278 49.875 -43.697 102.771 1.00 43.75 C
ATOM 18 C6 G B 278 50.326 -44.538 103.842 1.00 44.21 C
ATOM 19 O6 G B 278 50.956 -44.192 104.846 1.00 44.43 O
ATOM 20 N1 G B 278 49.934 -45.873 103.687 1.00 44.44 N
ATOM 21 C2 G B 278 49.215 -46.284 102.591 1.00 44.22 C
ATOM 22 N2 G B 278 48.870 -47.568 102.491 1.00 44.47 N
ATOM 23 N3 G B 278 48.840 -45.520 101.586 1.00 43.80 N
ATOM 24 C4 G B 278 49.179 -44.256 101.715 1.00 43.58 C
ATOM 25 P G B 279 43.505 -42.356 100.014 1.00 39.19 P
ATOM 26 OP1 G B 279 42.357 -42.740 99.225 1.00 39.06 O
ATOM 27 OP2 G B 279 43.463 -41.089 100.790 1.00 39.10 O
ATOM 28 O5' G B 279 43.897 -43.542 100.936 1.00 39.64 O
TER
Atoms:
OP1: (52.879,-50.296,90.639)
OP2: (52.424,-47.896,91.291)
C3': (50.915,-50.723,95.082)
C1': (52.275,-49.743,96.706)
C5': (52.786,-50.942,93.381)
O4': (53.067,-50.165,95.628)
C8: (52.575,-47.595,95.537)
O2': (51.016,-51.648,97.308)
C6: (51.427,-45.087,97.600)
C5: (51.816,-46.210,96.926)
C4: (51.656,-47.422,97.542)
P: (53.141,-49.145,91.524)
C4': (52.333,-51.087,94.801)
C2': (50.943,-50.442,96.574)
C2: (50.791,-46.540,99.324)
N1: (50.886,-45.290,98.832)
N3: (51.148,-47.671,98.749)
N6: (51.564,-43.888,97.033)
N7: (52.385,-46.319,95.687)
N9: (52.151,-48.295,96.623)
O5': (52.947,-49.585,93.040)
O3': (50.019,-51.729,94.718)
OP2: (52.424,-47.896,91.291)
C3': (50.915,-50.723,95.082)
C1': (52.275,-49.743,96.706)
C5': (52.786,-50.942,93.381)
O4': (53.067,-50.165,95.628)
C8: (52.575,-47.595,95.537)
O2': (51.016,-51.648,97.308)
C6: (51.427,-45.087,97.600)
C5: (51.816,-46.210,96.926)
C4: (51.656,-47.422,97.542)
P: (53.141,-49.145,91.524)
C4': (52.333,-51.087,94.801)
C2': (50.943,-50.442,96.574)
C2: (50.791,-46.540,99.324)
N1: (50.886,-45.290,98.832)
N3: (51.148,-47.671,98.749)
N6: (51.564,-43.888,97.033)
N7: (52.385,-46.319,95.687)
N9: (52.151,-48.295,96.623)
O5': (52.947,-49.585,93.040)
O3': (50.019,-51.729,94.718)
OP1: (48.664,-38.011,100.483)
OP2: (46.208,-37.424,100.293)
C3': (46.068,-42.297,99.501)
C1': (48.203,-43.304,99.527)
C5': (46.948,-40.054,98.867)
O6: (50.956,-44.192,104.846)
O4': (48.301,-42.025,98.937)
C8: (49.422,-42.160,101.417)
C2: (49.215,-46.284,102.591)
C6: (50.326,-44.538,103.842)
C5: (49.875,-43.697,102.771)
C4: (49.179,-44.256,101.715)
P: (47.264,-38.356,100.768)
C4': (46.978,-41.518,98.615)
C2': (46.737,-43.666,99.563)
O2': (46.468,-44.374,98.392)
N1: (49.934,-45.873,103.687)
N2: (48.870,-47.568,102.491)
N3: (48.840,-45.520,101.586)
N7: (50.012,-42.330,102.576)
N9: (48.854,-43.269,100.852)
O5': (46.969,-39.797,100.254)
O3': (44.757,-42.309,99.007)
OP2: (46.208,-37.424,100.293)
C3': (46.068,-42.297,99.501)
C1': (48.203,-43.304,99.527)
C5': (46.948,-40.054,98.867)
O6: (50.956,-44.192,104.846)
O4': (48.301,-42.025,98.937)
C8: (49.422,-42.160,101.417)
C2: (49.215,-46.284,102.591)
C6: (50.326,-44.538,103.842)
C5: (49.875,-43.697,102.771)
C4: (49.179,-44.256,101.715)
P: (47.264,-38.356,100.768)
C4': (46.978,-41.518,98.615)
C2': (46.737,-43.666,99.563)
O2': (46.468,-44.374,98.392)
N1: (49.934,-45.873,103.687)
N2: (48.870,-47.568,102.491)
N3: (48.840,-45.520,101.586)
N7: (50.012,-42.330,102.576)
N9: (48.854,-43.269,100.852)
O5': (46.969,-39.797,100.254)
O3': (44.757,-42.309,99.007)
Image (generated by PyMOL):