Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I5Y:B5:B6
Extra
PDB:
ATOM 1 O3' U A 4 77.978 20.633 4.265 1.00 9.05 O
ATOM 2 P U A 5 77.880 21.191 2.763 1.00 8.70 P
ATOM 3 OP1 U A 5 77.037 22.400 2.762 1.00 7.29 O
ATOM 4 OP2 U A 5 77.511 20.050 1.918 1.00 6.40 O
ATOM 5 O5' U A 5 79.371 21.690 2.452 1.00 10.24 O
ATOM 6 C5' U A 5 79.891 22.689 3.316 1.00 12.01 C
ATOM 7 C4' U A 5 81.400 22.703 3.358 1.00 13.95 C
ATOM 8 O4' U A 5 81.931 21.494 3.969 1.00 15.20 O
ATOM 9 C3' U A 5 82.091 22.788 2.000 1.00 14.65 C
ATOM 10 O3' U A 5 82.068 24.128 1.500 1.00 12.68 O
ATOM 11 C2' U A 5 83.492 22.324 2.384 1.00 15.64 C
ATOM 12 O2' U A 5 84.245 23.338 3.034 1.00 17.55 O
ATOM 13 C1' U A 5 83.178 21.184 3.356 1.00 16.42 C
ATOM 14 N1 U A 5 83.114 19.854 2.661 1.00 17.90 N
ATOM 15 C2 U A 5 84.271 19.105 2.532 1.00 18.53 C
ATOM 16 O2 U A 5 85.359 19.447 2.957 1.00 17.83 O
ATOM 17 N3 U A 5 84.107 17.912 1.875 1.00 19.61 N
ATOM 18 C4 U A 5 82.934 17.405 1.343 1.00 19.94 C
ATOM 19 O4 U A 5 82.951 16.318 0.781 1.00 21.28 O
ATOM 20 C5 U A 5 81.770 18.235 1.512 1.00 19.19 C
ATOM 21 C6 U A 5 81.908 19.403 2.144 1.00 18.24 C
ATOM 22 P U A 6 81.956 24.345 -0.076 1.00 11.62 P
ATOM 23 OP1 U A 6 82.211 25.783 -0.298 1.00 13.68 O
ATOM 24 OP2 U A 6 80.681 23.769 -0.544 1.00 10.09 O
ATOM 25 O5' U A 6 83.211 23.515 -0.643 1.00 11.65 O
TER
ATOM 1 O3' U B 5 82.068 24.128 1.500 1.00 12.68 O
ATOM 2 P U B 6 81.956 24.345 -0.076 1.00 11.62 P
ATOM 3 OP1 U B 6 82.211 25.783 -0.298 1.00 13.68 O
ATOM 4 OP2 U B 6 80.681 23.769 -0.544 1.00 10.09 O
ATOM 5 O5' U B 6 83.211 23.515 -0.643 1.00 11.65 O
ATOM 6 C5' U B 6 83.338 23.205 -2.036 1.00 13.51 C
ATOM 7 C4' U B 6 83.988 24.326 -2.825 1.00 14.93 C
ATOM 8 O4' U B 6 85.379 24.434 -2.459 1.00 16.10 O
ATOM 9 C3' U B 6 84.039 24.108 -4.323 1.00 16.94 C
ATOM 10 O3' U B 6 82.843 24.556 -4.912 1.00 18.53 O
ATOM 11 C2' U B 6 85.260 24.903 -4.783 1.00 16.75 C
ATOM 12 O2' U B 6 84.984 26.256 -5.121 1.00 17.16 O
ATOM 13 C1' U B 6 86.172 24.798 -3.565 1.00 16.23 C
ATOM 14 N1 U B 6 87.269 23.791 -3.727 1.00 16.78 N
ATOM 15 C2 U B 6 88.296 24.075 -4.603 1.00 15.85 C
ATOM 16 O2 U B 6 88.353 25.095 -5.255 1.00 15.38 O
ATOM 17 N3 U B 6 89.262 23.112 -4.698 1.00 17.02 N
ATOM 18 C4 U B 6 89.312 21.908 -4.015 1.00 18.69 C
ATOM 19 O4 U B 6 90.246 21.136 -4.210 1.00 20.47 O
ATOM 20 C5 U B 6 88.206 21.668 -3.121 1.00 18.60 C
ATOM 21 C6 U B 6 87.247 22.601 -3.013 1.00 17.82 C
ATOM 22 P U B 7 82.031 23.535 -5.812 1.00 20.41 P
ATOM 23 OP1 U B 7 80.892 24.299 -6.366 1.00 21.16 O
ATOM 24 OP2 U B 7 81.784 22.289 -5.059 1.00 20.32 O
ATOM 25 O5' U B 7 83.068 23.241 -6.983 1.00 23.23 O
TER
ATOM 2 P U A 5 77.880 21.191 2.763 1.00 8.70 P
ATOM 3 OP1 U A 5 77.037 22.400 2.762 1.00 7.29 O
ATOM 4 OP2 U A 5 77.511 20.050 1.918 1.00 6.40 O
ATOM 5 O5' U A 5 79.371 21.690 2.452 1.00 10.24 O
ATOM 6 C5' U A 5 79.891 22.689 3.316 1.00 12.01 C
ATOM 7 C4' U A 5 81.400 22.703 3.358 1.00 13.95 C
ATOM 8 O4' U A 5 81.931 21.494 3.969 1.00 15.20 O
ATOM 9 C3' U A 5 82.091 22.788 2.000 1.00 14.65 C
ATOM 10 O3' U A 5 82.068 24.128 1.500 1.00 12.68 O
ATOM 11 C2' U A 5 83.492 22.324 2.384 1.00 15.64 C
ATOM 12 O2' U A 5 84.245 23.338 3.034 1.00 17.55 O
ATOM 13 C1' U A 5 83.178 21.184 3.356 1.00 16.42 C
ATOM 14 N1 U A 5 83.114 19.854 2.661 1.00 17.90 N
ATOM 15 C2 U A 5 84.271 19.105 2.532 1.00 18.53 C
ATOM 16 O2 U A 5 85.359 19.447 2.957 1.00 17.83 O
ATOM 17 N3 U A 5 84.107 17.912 1.875 1.00 19.61 N
ATOM 18 C4 U A 5 82.934 17.405 1.343 1.00 19.94 C
ATOM 19 O4 U A 5 82.951 16.318 0.781 1.00 21.28 O
ATOM 20 C5 U A 5 81.770 18.235 1.512 1.00 19.19 C
ATOM 21 C6 U A 5 81.908 19.403 2.144 1.00 18.24 C
ATOM 22 P U A 6 81.956 24.345 -0.076 1.00 11.62 P
ATOM 23 OP1 U A 6 82.211 25.783 -0.298 1.00 13.68 O
ATOM 24 OP2 U A 6 80.681 23.769 -0.544 1.00 10.09 O
ATOM 25 O5' U A 6 83.211 23.515 -0.643 1.00 11.65 O
TER
ATOM 1 O3' U B 5 82.068 24.128 1.500 1.00 12.68 O
ATOM 2 P U B 6 81.956 24.345 -0.076 1.00 11.62 P
ATOM 3 OP1 U B 6 82.211 25.783 -0.298 1.00 13.68 O
ATOM 4 OP2 U B 6 80.681 23.769 -0.544 1.00 10.09 O
ATOM 5 O5' U B 6 83.211 23.515 -0.643 1.00 11.65 O
ATOM 6 C5' U B 6 83.338 23.205 -2.036 1.00 13.51 C
ATOM 7 C4' U B 6 83.988 24.326 -2.825 1.00 14.93 C
ATOM 8 O4' U B 6 85.379 24.434 -2.459 1.00 16.10 O
ATOM 9 C3' U B 6 84.039 24.108 -4.323 1.00 16.94 C
ATOM 10 O3' U B 6 82.843 24.556 -4.912 1.00 18.53 O
ATOM 11 C2' U B 6 85.260 24.903 -4.783 1.00 16.75 C
ATOM 12 O2' U B 6 84.984 26.256 -5.121 1.00 17.16 O
ATOM 13 C1' U B 6 86.172 24.798 -3.565 1.00 16.23 C
ATOM 14 N1 U B 6 87.269 23.791 -3.727 1.00 16.78 N
ATOM 15 C2 U B 6 88.296 24.075 -4.603 1.00 15.85 C
ATOM 16 O2 U B 6 88.353 25.095 -5.255 1.00 15.38 O
ATOM 17 N3 U B 6 89.262 23.112 -4.698 1.00 17.02 N
ATOM 18 C4 U B 6 89.312 21.908 -4.015 1.00 18.69 C
ATOM 19 O4 U B 6 90.246 21.136 -4.210 1.00 20.47 O
ATOM 20 C5 U B 6 88.206 21.668 -3.121 1.00 18.60 C
ATOM 21 C6 U B 6 87.247 22.601 -3.013 1.00 17.82 C
ATOM 22 P U B 7 82.031 23.535 -5.812 1.00 20.41 P
ATOM 23 OP1 U B 7 80.892 24.299 -6.366 1.00 21.16 O
ATOM 24 OP2 U B 7 81.784 22.289 -5.059 1.00 20.32 O
ATOM 25 O5' U B 7 83.068 23.241 -6.983 1.00 23.23 O
TER
Atoms:
C4: (82.934,17.405,1.343)
N3: (84.107,17.912,1.875)
OP1: (77.037,22.400,2.762)
OP2: (77.511,20.050,1.918)
C2: (84.271,19.105,2.532)
C1': (83.178,21.184,3.356)
C3': (82.091,22.788,2.000)
O5': (79.371,21.690,2.452)
O4': (81.931,21.494,3.969)
C5': (79.891,22.689,3.316)
P: (77.880,21.191,2.763)
C4': (81.400,22.703,3.358)
C2': (83.492,22.324,2.384)
O2': (84.245,23.338,3.034)
N1: (83.114,19.854,2.661)
O4: (82.951,16.318,0.781)
O2: (85.359,19.447,2.957)
C6: (81.908,19.403,2.144)
C5: (81.770,18.235,1.512)
O3': (82.068,24.128,1.500)
N3: (84.107,17.912,1.875)
OP1: (77.037,22.400,2.762)
OP2: (77.511,20.050,1.918)
C2: (84.271,19.105,2.532)
C1': (83.178,21.184,3.356)
C3': (82.091,22.788,2.000)
O5': (79.371,21.690,2.452)
O4': (81.931,21.494,3.969)
C5': (79.891,22.689,3.316)
P: (77.880,21.191,2.763)
C4': (81.400,22.703,3.358)
C2': (83.492,22.324,2.384)
O2': (84.245,23.338,3.034)
N1: (83.114,19.854,2.661)
O4: (82.951,16.318,0.781)
O2: (85.359,19.447,2.957)
C6: (81.908,19.403,2.144)
C5: (81.770,18.235,1.512)
O3': (82.068,24.128,1.500)
C4: (89.312,21.908,-4.015)
N3: (89.262,23.112,-4.698)
OP1: (82.211,25.783,-0.298)
OP2: (80.681,23.769,-0.544)
C2: (88.296,24.075,-4.603)
C1': (86.172,24.798,-3.565)
C3': (84.039,24.108,-4.323)
O5': (83.211,23.515,-0.643)
O4': (85.379,24.434,-2.459)
C5': (83.338,23.205,-2.036)
P: (81.956,24.345,-0.076)
C4': (83.988,24.326,-2.825)
C2': (85.260,24.903,-4.783)
O2': (84.984,26.256,-5.121)
N1: (87.269,23.791,-3.727)
O4: (90.246,21.136,-4.210)
O2: (88.353,25.095,-5.255)
C6: (87.247,22.601,-3.013)
C5: (88.206,21.668,-3.121)
O3': (82.843,24.556,-4.912)
N3: (89.262,23.112,-4.698)
OP1: (82.211,25.783,-0.298)
OP2: (80.681,23.769,-0.544)
C2: (88.296,24.075,-4.603)
C1': (86.172,24.798,-3.565)
C3': (84.039,24.108,-4.323)
O5': (83.211,23.515,-0.643)
O4': (85.379,24.434,-2.459)
C5': (83.338,23.205,-2.036)
P: (81.956,24.345,-0.076)
C4': (83.988,24.326,-2.825)
C2': (85.260,24.903,-4.783)
O2': (84.984,26.256,-5.121)
N1: (87.269,23.791,-3.727)
O4: (90.246,21.136,-4.210)
O2: (88.353,25.095,-5.255)
C6: (87.247,22.601,-3.013)
C5: (88.206,21.668,-3.121)
O3': (82.843,24.556,-4.912)
Image (generated by PyMOL):