ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SQW:B4:B5

Extra

PDB:
ATOM 1 O3' U A 3 76.929 20.862 4.231 1.00 24.91 O
ATOM 2 P U A 4 76.948 21.487 2.784 1.00 34.45 P
ATOM 3 OP1 U A 4 75.994 22.646 2.782 1.00 33.13 O
ATOM 4 OP2 U A 4 76.590 20.426 1.826 1.00 37.54 O
ATOM 5 O5' U A 4 78.458 21.920 2.589 1.00 35.03 O
ATOM 6 C5' U A 4 78.968 22.952 3.402 1.00 35.13 C
ATOM 7 C4' U A 4 80.459 22.965 3.456 1.00 36.69 C
ATOM 8 O4' U A 4 80.980 21.739 4.029 1.00 40.08 O
ATOM 9 C3' U A 4 81.194 23.120 2.132 1.00 36.02 C
ATOM 10 O3' U A 4 81.193 24.476 1.656 1.00 35.10 O
ATOM 11 C2' U A 4 82.598 22.654 2.537 1.00 39.30 C
ATOM 12 O2' U A 4 83.349 23.634 3.235 1.00 40.82 O
ATOM 13 C1' U A 4 82.254 21.473 3.451 1.00 41.70 C
ATOM 14 N1 U A 4 82.221 20.157 2.718 1.00 43.82 N
ATOM 15 C2 U A 4 83.412 19.453 2.582 1.00 48.65 C
ATOM 16 O2 U A 4 84.475 19.850 2.991 1.00 50.63 O
ATOM 17 N3 U A 4 83.314 18.269 1.907 1.00 52.41 N
ATOM 18 C4 U A 4 82.169 17.731 1.368 1.00 51.84 C
ATOM 19 O4 U A 4 82.245 16.655 0.797 1.00 62.23 O
ATOM 20 C5 U A 4 80.964 18.496 1.545 1.00 46.33 C
ATOM 21 C6 U A 4 81.033 19.661 2.209 1.00 42.53 C
ATOM 22 P U A 5 81.059 24.724 0.085 1.00 34.58 P
ATOM 23 OP1 U A 5 81.188 26.156 -0.156 1.00 35.54 O
ATOM 24 OP2 U A 5 79.880 24.014 -0.429 1.00 33.65 O
ATOM 25 O5' U A 5 82.369 23.977 -0.476 1.00 36.77 O
TER

ATOM 1 O3' U B 4 81.193 24.476 1.656 1.00 35.10 O
ATOM 2 P U B 5 81.059 24.724 0.085 1.00 34.58 P
ATOM 3 OP1 U B 5 81.188 26.156 -0.156 1.00 35.54 O
ATOM 4 OP2 U B 5 79.880 24.014 -0.429 1.00 33.65 O
ATOM 5 O5' U B 5 82.369 23.977 -0.476 1.00 36.77 O
ATOM 6 C5' U B 5 82.496 23.596 -1.838 1.00 38.47 C
ATOM 7 C4' U B 5 83.098 24.736 -2.640 1.00 39.92 C
ATOM 8 O4' U B 5 84.476 24.947 -2.243 1.00 41.83 O
ATOM 9 C3' U B 5 83.168 24.515 -4.140 1.00 43.19 C
ATOM 10 O3' U B 5 81.933 24.871 -4.755 1.00 42.94 O
ATOM 11 C2' U B 5 84.335 25.408 -4.534 1.00 45.93 C
ATOM 12 O2' U B 5 84.006 26.783 -4.677 1.00 46.20 O
ATOM 13 C1' U B 5 85.278 25.228 -3.346 1.00 45.24 C
ATOM 14 N1 U B 5 86.323 24.167 -3.529 1.00 48.83 N
ATOM 15 C2 U B 5 87.356 24.447 -4.382 1.00 53.27 C
ATOM 16 O2 U B 5 87.443 25.490 -4.975 1.00 54.27 O
ATOM 17 N3 U B 5 88.286 23.454 -4.516 1.00 59.54 N
ATOM 18 C4 U B 5 88.285 22.218 -3.886 1.00 61.00 C
ATOM 19 O4 U B 5 89.193 21.417 -4.112 1.00 70.04 O
ATOM 20 C5 U B 5 87.179 21.995 -2.998 1.00 55.07 C
ATOM 21 C6 U B 5 86.254 22.953 -2.860 1.00 49.15 C
ATOM 22 P U B 6 81.178 23.846 -5.714 1.00 48.80 P
ATOM 23 OP1 U B 6 80.006 24.487 -6.326 1.00 49.05 O
ATOM 24 OP2 U B 6 81.030 22.594 -4.965 1.00 46.09 O
ATOM 25 O5' U B 6 82.247 23.578 -6.864 1.00 54.95 O
TER

Atoms:
C4: (82.169,17.731,1.368)
N3: (83.314,18.269,1.907)
OP1: (75.994,22.646,2.782)
OP2: (76.590,20.426,1.826)
C2: (83.412,19.453,2.582)
C1': (82.254,21.473,3.451)
C3': (81.194,23.120,2.132)
O5': (78.458,21.920,2.589)
O4': (80.980,21.739,4.029)
C5': (78.968,22.952,3.402)
P: (76.948,21.487,2.784)
C4': (80.459,22.965,3.456)
C2': (82.598,22.654,2.537)
O2': (83.349,23.634,3.235)
N1: (82.221,20.157,2.718)
O4: (82.245,16.655,0.797)
O2: (84.475,19.850,2.991)
C6: (81.033,19.661,2.209)
C5: (80.964,18.496,1.545)
O3': (81.193,24.476,1.656)
C4: (88.285,22.218,-3.886)
N3: (88.286,23.454,-4.516)
OP1: (81.188,26.156,-0.156)
OP2: (79.880,24.014,-0.429)
C2: (87.356,24.447,-4.382)
C1': (85.278,25.228,-3.346)
C3': (83.168,24.515,-4.140)
O5': (82.369,23.977,-0.476)
O4': (84.476,24.947,-2.243)
C5': (82.496,23.596,-1.838)
P: (81.059,24.724,0.085)
C4': (83.098,24.736,-2.640)
C2': (84.335,25.408,-4.534)
O2': (84.006,26.783,-4.677)
N1: (86.323,24.167,-3.529)
O4: (89.193,21.417,-4.112)
O2: (87.443,25.490,-4.975)
C6: (86.254,22.953,-2.860)
C5: (87.179,21.995,-2.998)
O3': (81.933,24.871,-4.755)
Image (generated by PyMOL):
PyMOL image
show in jmol