Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:W7:W8
Extra
PDB:
ATOM 1 O3' A A 6 118.624 -20.681 20.106 1.00136.83 O
ATOM 2 P U A 7 118.395 -19.727 21.410 1.00138.02 P
ATOM 3 OP1 U A 7 118.306 -20.539 22.658 1.00138.37 O
ATOM 4 OP2 U A 7 117.308 -18.752 21.086 1.00136.99 O
ATOM 5 O5' U A 7 119.740 -18.864 21.526 1.00137.46 O
ATOM 6 C5' U A 7 120.642 -18.745 20.422 1.00136.37 C
ATOM 7 C4' U A 7 121.931 -18.039 20.825 1.00135.11 C
ATOM 8 O4' U A 7 122.835 -18.127 19.690 1.00134.85 O
ATOM 9 C3' U A 7 121.812 -16.549 21.147 1.00134.70 C
ATOM 10 O3' U A 7 121.658 -16.320 22.548 1.00134.21 O
ATOM 11 C2' U A 7 123.117 -15.966 20.614 1.00134.80 C
ATOM 12 O2' U A 7 124.201 -16.089 21.516 1.00134.71 O
ATOM 13 C1' U A 7 123.369 -16.853 19.391 1.00135.17 C
ATOM 14 N1 U A 7 122.737 -16.390 18.140 1.00136.22 N
ATOM 15 C2 U A 7 123.558 -16.071 17.058 1.00136.99 C
ATOM 16 O2 U A 7 124.780 -16.140 17.098 1.00138.10 O
ATOM 17 N3 U A 7 122.891 -15.667 15.922 1.00137.22 N
ATOM 18 C4 U A 7 121.524 -15.546 15.753 1.00137.03 C
ATOM 19 O4 U A 7 121.077 -15.160 14.667 1.00136.95 O
ATOM 20 C5 U A 7 120.748 -15.885 16.907 1.00136.99 C
ATOM 21 C6 U A 7 121.361 -16.283 18.030 1.00136.59 C
ATOM 22 P C A 8 120.801 -15.059 23.070 1.00134.23 P
ATOM 23 OP1 C A 8 120.190 -15.449 24.375 1.00133.50 O
ATOM 24 OP2 C A 8 119.926 -14.609 21.954 1.00134.14 O
ATOM 25 O5' C A 8 121.885 -13.919 23.349 1.00133.55 O
TER
ATOM 1 O3' U B 7 121.658 -16.320 22.548 1.00134.21 O
ATOM 2 P C B 8 120.801 -15.059 23.070 1.00134.23 P
ATOM 3 OP1 C B 8 120.190 -15.449 24.375 1.00133.50 O
ATOM 4 OP2 C B 8 119.926 -14.609 21.954 1.00134.14 O
ATOM 5 O5' C B 8 121.885 -13.919 23.349 1.00133.55 O
ATOM 6 C5' C B 8 122.859 -14.085 24.381 1.00133.27 C
ATOM 7 C4' C B 8 123.249 -12.752 24.997 1.00132.49 C
ATOM 8 O4' C B 8 124.210 -12.052 24.159 1.00132.49 O
ATOM 9 C3' C B 8 122.135 -11.753 25.323 1.00132.13 C
ATOM 10 O3' C B 8 122.420 -11.120 26.574 1.00131.88 O
ATOM 11 C2' C B 8 122.324 -10.689 24.246 1.00132.31 C
ATOM 12 O2' C B 8 121.867 -9.417 24.655 1.00133.21 O
ATOM 13 C1' C B 8 123.847 -10.696 24.112 1.00133.08 C
ATOM 14 N1 C B 8 124.460 -10.039 22.938 1.00134.40 N
ATOM 15 C2 C B 8 125.585 -9.214 23.147 1.00134.84 C
ATOM 16 O2 C B 8 126.073 -9.132 24.287 1.00134.55 O
ATOM 17 N3 C B 8 126.110 -8.534 22.101 1.00135.44 N
ATOM 18 C4 C B 8 125.573 -8.660 20.886 1.00135.91 C
ATOM 19 N4 C B 8 126.098 -7.936 19.894 1.00135.98 N
ATOM 20 C5 C B 8 124.464 -9.525 20.635 1.00135.65 C
ATOM 21 C6 C B 8 123.945 -10.191 21.679 1.00135.25 C
ATOM 22 P G B 9 121.554 -11.478 27.886 1.00132.15 P
ATOM 23 OP1 G B 9 122.281 -10.899 29.053 1.00131.33 O
ATOM 24 OP2 G B 9 121.290 -12.945 27.843 1.00132.30 O
ATOM 25 O5' G B 9 120.163 -10.701 27.703 1.00131.50 O
TER
ATOM 2 P U A 7 118.395 -19.727 21.410 1.00138.02 P
ATOM 3 OP1 U A 7 118.306 -20.539 22.658 1.00138.37 O
ATOM 4 OP2 U A 7 117.308 -18.752 21.086 1.00136.99 O
ATOM 5 O5' U A 7 119.740 -18.864 21.526 1.00137.46 O
ATOM 6 C5' U A 7 120.642 -18.745 20.422 1.00136.37 C
ATOM 7 C4' U A 7 121.931 -18.039 20.825 1.00135.11 C
ATOM 8 O4' U A 7 122.835 -18.127 19.690 1.00134.85 O
ATOM 9 C3' U A 7 121.812 -16.549 21.147 1.00134.70 C
ATOM 10 O3' U A 7 121.658 -16.320 22.548 1.00134.21 O
ATOM 11 C2' U A 7 123.117 -15.966 20.614 1.00134.80 C
ATOM 12 O2' U A 7 124.201 -16.089 21.516 1.00134.71 O
ATOM 13 C1' U A 7 123.369 -16.853 19.391 1.00135.17 C
ATOM 14 N1 U A 7 122.737 -16.390 18.140 1.00136.22 N
ATOM 15 C2 U A 7 123.558 -16.071 17.058 1.00136.99 C
ATOM 16 O2 U A 7 124.780 -16.140 17.098 1.00138.10 O
ATOM 17 N3 U A 7 122.891 -15.667 15.922 1.00137.22 N
ATOM 18 C4 U A 7 121.524 -15.546 15.753 1.00137.03 C
ATOM 19 O4 U A 7 121.077 -15.160 14.667 1.00136.95 O
ATOM 20 C5 U A 7 120.748 -15.885 16.907 1.00136.99 C
ATOM 21 C6 U A 7 121.361 -16.283 18.030 1.00136.59 C
ATOM 22 P C A 8 120.801 -15.059 23.070 1.00134.23 P
ATOM 23 OP1 C A 8 120.190 -15.449 24.375 1.00133.50 O
ATOM 24 OP2 C A 8 119.926 -14.609 21.954 1.00134.14 O
ATOM 25 O5' C A 8 121.885 -13.919 23.349 1.00133.55 O
TER
ATOM 1 O3' U B 7 121.658 -16.320 22.548 1.00134.21 O
ATOM 2 P C B 8 120.801 -15.059 23.070 1.00134.23 P
ATOM 3 OP1 C B 8 120.190 -15.449 24.375 1.00133.50 O
ATOM 4 OP2 C B 8 119.926 -14.609 21.954 1.00134.14 O
ATOM 5 O5' C B 8 121.885 -13.919 23.349 1.00133.55 O
ATOM 6 C5' C B 8 122.859 -14.085 24.381 1.00133.27 C
ATOM 7 C4' C B 8 123.249 -12.752 24.997 1.00132.49 C
ATOM 8 O4' C B 8 124.210 -12.052 24.159 1.00132.49 O
ATOM 9 C3' C B 8 122.135 -11.753 25.323 1.00132.13 C
ATOM 10 O3' C B 8 122.420 -11.120 26.574 1.00131.88 O
ATOM 11 C2' C B 8 122.324 -10.689 24.246 1.00132.31 C
ATOM 12 O2' C B 8 121.867 -9.417 24.655 1.00133.21 O
ATOM 13 C1' C B 8 123.847 -10.696 24.112 1.00133.08 C
ATOM 14 N1 C B 8 124.460 -10.039 22.938 1.00134.40 N
ATOM 15 C2 C B 8 125.585 -9.214 23.147 1.00134.84 C
ATOM 16 O2 C B 8 126.073 -9.132 24.287 1.00134.55 O
ATOM 17 N3 C B 8 126.110 -8.534 22.101 1.00135.44 N
ATOM 18 C4 C B 8 125.573 -8.660 20.886 1.00135.91 C
ATOM 19 N4 C B 8 126.098 -7.936 19.894 1.00135.98 N
ATOM 20 C5 C B 8 124.464 -9.525 20.635 1.00135.65 C
ATOM 21 C6 C B 8 123.945 -10.191 21.679 1.00135.25 C
ATOM 22 P G B 9 121.554 -11.478 27.886 1.00132.15 P
ATOM 23 OP1 G B 9 122.281 -10.899 29.053 1.00131.33 O
ATOM 24 OP2 G B 9 121.290 -12.945 27.843 1.00132.30 O
ATOM 25 O5' G B 9 120.163 -10.701 27.703 1.00131.50 O
TER
Atoms:
C4: (121.524,-15.546,15.753)
N3: (122.891,-15.667,15.922)
OP1: (118.306,-20.539,22.658)
OP2: (117.308,-18.752,21.086)
C2: (123.558,-16.071,17.058)
C1': (123.369,-16.853,19.391)
C3': (121.812,-16.549,21.147)
O5': (119.740,-18.864,21.526)
O4': (122.835,-18.127,19.690)
C5': (120.642,-18.745,20.422)
P: (118.395,-19.727,21.410)
C4': (121.931,-18.039,20.825)
C2': (123.117,-15.966,20.614)
O2': (124.201,-16.089,21.516)
N1: (122.737,-16.390,18.140)
O4: (121.077,-15.160,14.667)
O2: (124.780,-16.140,17.098)
C6: (121.361,-16.283,18.030)
C5: (120.748,-15.885,16.907)
O3': (121.658,-16.320,22.548)
N3: (122.891,-15.667,15.922)
OP1: (118.306,-20.539,22.658)
OP2: (117.308,-18.752,21.086)
C2: (123.558,-16.071,17.058)
C1': (123.369,-16.853,19.391)
C3': (121.812,-16.549,21.147)
O5': (119.740,-18.864,21.526)
O4': (122.835,-18.127,19.690)
C5': (120.642,-18.745,20.422)
P: (118.395,-19.727,21.410)
C4': (121.931,-18.039,20.825)
C2': (123.117,-15.966,20.614)
O2': (124.201,-16.089,21.516)
N1: (122.737,-16.390,18.140)
O4: (121.077,-15.160,14.667)
O2: (124.780,-16.140,17.098)
C6: (121.361,-16.283,18.030)
C5: (120.748,-15.885,16.907)
O3': (121.658,-16.320,22.548)
C2: (125.585,-9.214,23.147)
OP1: (120.190,-15.449,24.375)
OP2: (119.926,-14.609,21.954)
C4: (125.573,-8.660,20.886)
O5': (121.885,-13.919,23.349)
C3': (122.135,-11.753,25.323)
C1': (123.847,-10.696,24.112)
O4': (124.210,-12.052,24.159)
C5': (122.859,-14.085,24.381)
P: (120.801,-15.059,23.070)
O2: (126.073,-9.132,24.287)
C4': (123.249,-12.752,24.997)
C2': (122.324,-10.689,24.246)
O2': (121.867,-9.417,24.655)
N1: (124.460,-10.039,22.938)
N3: (126.110,-8.534,22.101)
N4: (126.098,-7.936,19.894)
C6: (123.945,-10.191,21.679)
C5: (124.464,-9.525,20.635)
O3': (122.420,-11.120,26.574)
OP1: (120.190,-15.449,24.375)
OP2: (119.926,-14.609,21.954)
C4: (125.573,-8.660,20.886)
O5': (121.885,-13.919,23.349)
C3': (122.135,-11.753,25.323)
C1': (123.847,-10.696,24.112)
O4': (124.210,-12.052,24.159)
C5': (122.859,-14.085,24.381)
P: (120.801,-15.059,23.070)
O2: (126.073,-9.132,24.287)
C4': (123.249,-12.752,24.997)
C2': (122.324,-10.689,24.246)
O2': (121.867,-9.417,24.655)
N1: (124.460,-10.039,22.938)
N3: (126.110,-8.534,22.101)
N4: (126.098,-7.936,19.894)
C6: (123.945,-10.191,21.679)
C5: (124.464,-9.525,20.635)
O3': (122.420,-11.120,26.574)
Image (generated by PyMOL):