Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12908:12909
Extra
PDB:
ATOM 1 O3' U A2907 79.557 59.341 58.764 1.00261.17 O
ATOM 2 P U A2908 80.590 58.076 58.649 1.00235.45 P
ATOM 3 OP1 U A2908 79.787 56.889 58.264 1.00234.86 O
ATOM 4 OP2 U A2908 81.359 58.028 59.923 1.00235.56 O
ATOM 5 O5' U A2908 81.573 58.471 57.454 1.00235.74 O
ATOM 6 C5' U A2908 81.294 58.109 56.100 1.00235.56 C
ATOM 7 C4' U A2908 81.056 59.344 55.285 1.00236.04 C
ATOM 8 O4' U A2908 81.549 60.486 56.055 1.00236.57 O
ATOM 9 C3' U A2908 81.781 59.421 53.964 1.00236.19 C
ATOM 10 O3' U A2908 81.083 60.406 53.170 1.00236.52 O
ATOM 11 C2' U A2908 83.134 59.937 54.450 1.00236.60 C
ATOM 12 O2' U A2908 84.018 60.412 53.470 1.00236.95 O
ATOM 13 C1' U A2908 82.696 61.019 55.420 1.00236.97 C
ATOM 14 N1 U A2908 83.706 61.327 56.448 1.00237.25 N
ATOM 15 C2 U A2908 83.522 62.406 57.290 1.00237.68 C
ATOM 16 O2 U A2908 82.533 63.116 57.272 1.00237.83 O
ATOM 17 N3 U A2908 84.542 62.597 58.184 1.00237.93 N
ATOM 18 C4 U A2908 85.700 61.853 58.296 1.00237.80 C
ATOM 19 O4 U A2908 86.526 62.157 59.151 1.00238.08 O
ATOM 20 C5 U A2908 85.825 60.771 57.374 1.00237.36 C
ATOM 21 C6 U A2908 84.846 60.559 56.499 1.00237.11 C
ATOM 22 P U A2909 81.802 61.298 52.036 1.00175.78 P
ATOM 23 OP1 U A2909 82.351 62.503 52.710 1.00176.35 O
ATOM 24 OP2 U A2909 80.801 61.490 50.952 1.00175.75 O
ATOM 25 O5' U A2909 82.996 60.350 51.531 1.00175.57 O
TER
ATOM 1 O3' U B2908 81.083 60.406 53.170 1.00236.52 O
ATOM 2 P U B2909 81.802 61.298 52.036 1.00175.78 P
ATOM 3 OP1 U B2909 82.351 62.503 52.710 1.00176.35 O
ATOM 4 OP2 U B2909 80.801 61.490 50.952 1.00175.75 O
ATOM 5 O5' U B2909 82.996 60.350 51.531 1.00175.57 O
ATOM 6 C5' U B2909 84.057 60.853 50.715 1.00175.97 C
ATOM 7 C4' U B2909 83.589 61.122 49.319 1.00176.07 C
ATOM 8 O4' U B2909 82.724 62.281 49.329 1.00176.43 O
ATOM 9 C3' U B2909 84.677 61.424 48.316 1.00176.41 C
ATOM 10 O3' U B2909 84.208 61.041 47.015 1.00176.26 O
ATOM 11 C2' U B2909 84.785 62.949 48.422 1.00177.07 C
ATOM 12 O2' U B2909 85.347 63.586 47.295 1.00177.50 O
ATOM 13 C1' U B2909 83.323 63.349 48.635 1.00177.01 C
ATOM 14 N1 U B2909 83.137 64.532 49.470 1.00177.46 N
ATOM 15 C2 U B2909 82.021 65.295 49.204 1.00177.65 C
ATOM 16 O2 U B2909 81.262 65.049 48.292 1.00177.48 O
ATOM 17 N3 U B2909 81.839 66.365 50.025 1.00178.07 N
ATOM 18 C4 U B2909 82.654 66.704 51.075 1.00178.30 C
ATOM 19 O4 U B2909 82.379 67.698 51.725 1.00178.69 O
ATOM 20 C5 U B2909 83.776 65.848 51.302 1.00178.07 C
ATOM 21 C6 U B2909 83.975 64.794 50.515 1.00177.66 C
ATOM 22 P G B2910 83.654 59.533 46.741 1.00112.22 P
ATOM 23 OP1 G B2910 84.268 58.630 47.767 1.00111.88 O
ATOM 24 OP2 G B2910 83.893 59.240 45.302 1.00112.23 O
ATOM 25 O5' G B2910 82.088 59.648 47.002 1.00112.02 O
TER
ATOM 2 P U A2908 80.590 58.076 58.649 1.00235.45 P
ATOM 3 OP1 U A2908 79.787 56.889 58.264 1.00234.86 O
ATOM 4 OP2 U A2908 81.359 58.028 59.923 1.00235.56 O
ATOM 5 O5' U A2908 81.573 58.471 57.454 1.00235.74 O
ATOM 6 C5' U A2908 81.294 58.109 56.100 1.00235.56 C
ATOM 7 C4' U A2908 81.056 59.344 55.285 1.00236.04 C
ATOM 8 O4' U A2908 81.549 60.486 56.055 1.00236.57 O
ATOM 9 C3' U A2908 81.781 59.421 53.964 1.00236.19 C
ATOM 10 O3' U A2908 81.083 60.406 53.170 1.00236.52 O
ATOM 11 C2' U A2908 83.134 59.937 54.450 1.00236.60 C
ATOM 12 O2' U A2908 84.018 60.412 53.470 1.00236.95 O
ATOM 13 C1' U A2908 82.696 61.019 55.420 1.00236.97 C
ATOM 14 N1 U A2908 83.706 61.327 56.448 1.00237.25 N
ATOM 15 C2 U A2908 83.522 62.406 57.290 1.00237.68 C
ATOM 16 O2 U A2908 82.533 63.116 57.272 1.00237.83 O
ATOM 17 N3 U A2908 84.542 62.597 58.184 1.00237.93 N
ATOM 18 C4 U A2908 85.700 61.853 58.296 1.00237.80 C
ATOM 19 O4 U A2908 86.526 62.157 59.151 1.00238.08 O
ATOM 20 C5 U A2908 85.825 60.771 57.374 1.00237.36 C
ATOM 21 C6 U A2908 84.846 60.559 56.499 1.00237.11 C
ATOM 22 P U A2909 81.802 61.298 52.036 1.00175.78 P
ATOM 23 OP1 U A2909 82.351 62.503 52.710 1.00176.35 O
ATOM 24 OP2 U A2909 80.801 61.490 50.952 1.00175.75 O
ATOM 25 O5' U A2909 82.996 60.350 51.531 1.00175.57 O
TER
ATOM 1 O3' U B2908 81.083 60.406 53.170 1.00236.52 O
ATOM 2 P U B2909 81.802 61.298 52.036 1.00175.78 P
ATOM 3 OP1 U B2909 82.351 62.503 52.710 1.00176.35 O
ATOM 4 OP2 U B2909 80.801 61.490 50.952 1.00175.75 O
ATOM 5 O5' U B2909 82.996 60.350 51.531 1.00175.57 O
ATOM 6 C5' U B2909 84.057 60.853 50.715 1.00175.97 C
ATOM 7 C4' U B2909 83.589 61.122 49.319 1.00176.07 C
ATOM 8 O4' U B2909 82.724 62.281 49.329 1.00176.43 O
ATOM 9 C3' U B2909 84.677 61.424 48.316 1.00176.41 C
ATOM 10 O3' U B2909 84.208 61.041 47.015 1.00176.26 O
ATOM 11 C2' U B2909 84.785 62.949 48.422 1.00177.07 C
ATOM 12 O2' U B2909 85.347 63.586 47.295 1.00177.50 O
ATOM 13 C1' U B2909 83.323 63.349 48.635 1.00177.01 C
ATOM 14 N1 U B2909 83.137 64.532 49.470 1.00177.46 N
ATOM 15 C2 U B2909 82.021 65.295 49.204 1.00177.65 C
ATOM 16 O2 U B2909 81.262 65.049 48.292 1.00177.48 O
ATOM 17 N3 U B2909 81.839 66.365 50.025 1.00178.07 N
ATOM 18 C4 U B2909 82.654 66.704 51.075 1.00178.30 C
ATOM 19 O4 U B2909 82.379 67.698 51.725 1.00178.69 O
ATOM 20 C5 U B2909 83.776 65.848 51.302 1.00178.07 C
ATOM 21 C6 U B2909 83.975 64.794 50.515 1.00177.66 C
ATOM 22 P G B2910 83.654 59.533 46.741 1.00112.22 P
ATOM 23 OP1 G B2910 84.268 58.630 47.767 1.00111.88 O
ATOM 24 OP2 G B2910 83.893 59.240 45.302 1.00112.23 O
ATOM 25 O5' G B2910 82.088 59.648 47.002 1.00112.02 O
TER
Atoms:
C4: (85.700,61.853,58.296)
N3: (84.542,62.597,58.184)
OP1: (79.787,56.889,58.264)
OP2: (81.359,58.028,59.923)
C2: (83.522,62.406,57.290)
C1': (82.696,61.019,55.420)
C3': (81.781,59.421,53.964)
O5': (81.573,58.471,57.454)
O4': (81.549,60.486,56.055)
C5': (81.294,58.109,56.100)
P: (80.590,58.076,58.649)
C4': (81.056,59.344,55.285)
C2': (83.134,59.937,54.450)
O2': (84.018,60.412,53.470)
N1: (83.706,61.327,56.448)
O4: (86.526,62.157,59.151)
O2: (82.533,63.116,57.272)
C6: (84.846,60.559,56.499)
C5: (85.825,60.771,57.374)
O3': (81.083,60.406,53.170)
N3: (84.542,62.597,58.184)
OP1: (79.787,56.889,58.264)
OP2: (81.359,58.028,59.923)
C2: (83.522,62.406,57.290)
C1': (82.696,61.019,55.420)
C3': (81.781,59.421,53.964)
O5': (81.573,58.471,57.454)
O4': (81.549,60.486,56.055)
C5': (81.294,58.109,56.100)
P: (80.590,58.076,58.649)
C4': (81.056,59.344,55.285)
C2': (83.134,59.937,54.450)
O2': (84.018,60.412,53.470)
N1: (83.706,61.327,56.448)
O4: (86.526,62.157,59.151)
O2: (82.533,63.116,57.272)
C6: (84.846,60.559,56.499)
C5: (85.825,60.771,57.374)
O3': (81.083,60.406,53.170)
C4: (82.654,66.704,51.075)
N3: (81.839,66.365,50.025)
OP1: (82.351,62.503,52.710)
OP2: (80.801,61.490,50.952)
C2: (82.021,65.295,49.204)
C1': (83.323,63.349,48.635)
C3': (84.677,61.424,48.316)
O5': (82.996,60.350,51.531)
O4': (82.724,62.281,49.329)
C5': (84.057,60.853,50.715)
P: (81.802,61.298,52.036)
C4': (83.589,61.122,49.319)
C2': (84.785,62.949,48.422)
O2': (85.347,63.586,47.295)
N1: (83.137,64.532,49.470)
O4: (82.379,67.698,51.725)
O2: (81.262,65.049,48.292)
C6: (83.975,64.794,50.515)
C5: (83.776,65.848,51.302)
O3': (84.208,61.041,47.015)
N3: (81.839,66.365,50.025)
OP1: (82.351,62.503,52.710)
OP2: (80.801,61.490,50.952)
C2: (82.021,65.295,49.204)
C1': (83.323,63.349,48.635)
C3': (84.677,61.424,48.316)
O5': (82.996,60.350,51.531)
O4': (82.724,62.281,49.329)
C5': (84.057,60.853,50.715)
P: (81.802,61.298,52.036)
C4': (83.589,61.122,49.319)
C2': (84.785,62.949,48.422)
O2': (85.347,63.586,47.295)
N1: (83.137,64.532,49.470)
O4: (82.379,67.698,51.725)
O2: (81.262,65.049,48.292)
C6: (83.975,64.794,50.515)
C5: (83.776,65.848,51.302)
O3': (84.208,61.041,47.015)
Image (generated by PyMOL):