Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:02079:02105
Extra
PDB:
ATOM 1 O3' C A2078 108.900 110.312 32.042 1.00 61.95 O
ATOM 2 P U A2079 110.314 110.386 31.283 1.00 66.49 P
ATOM 3 OP1 U A2079 111.254 111.148 32.137 1.00 67.61 O
ATOM 4 OP2 U A2079 110.064 110.837 29.886 1.00 67.08 O
ATOM 5 O5' U A2079 110.848 108.888 31.256 1.00 63.52 O
ATOM 6 C5' U A2079 112.041 108.566 30.529 1.00 63.86 C
ATOM 7 C4' U A2079 112.886 107.578 31.297 1.00 63.83 C
ATOM 8 O4' U A2079 113.389 108.202 32.510 1.00 62.84 O
ATOM 9 C3' U A2079 112.204 106.281 31.734 1.00 64.93 C
ATOM 10 O3' U A2079 113.152 105.214 31.666 1.00 68.98 O
ATOM 11 C2' U A2079 111.906 106.552 33.207 1.00 63.68 C
ATOM 12 O2' U A2079 111.832 105.373 33.986 1.00 65.78 O
ATOM 13 C1' U A2079 113.149 107.341 33.599 1.00 61.94 C
ATOM 14 N1 U A2079 113.068 108.125 34.841 1.00 59.52 N
ATOM 15 C2 U A2079 113.653 107.582 35.971 1.00 58.48 C
ATOM 16 O2 U A2079 114.150 106.466 35.999 1.00 60.51 O
ATOM 17 N3 U A2079 113.640 108.391 37.072 1.00 57.66 N
ATOM 18 C4 U A2079 113.103 109.647 37.171 1.00 56.84 C
ATOM 19 O4 U A2079 113.208 110.260 38.232 1.00 57.50 O
ATOM 20 C5 U A2079 112.461 110.118 35.985 1.00 57.24 C
ATOM 21 C6 U A2079 112.465 109.360 34.886 1.00 58.45 C
ATOM 22 P G A2080 113.543 104.567 30.241 1.00 71.81 P
ATOM 23 OP1 G A2080 112.454 104.883 29.262 1.00 68.25 O
ATOM 24 OP2 G A2080 113.919 103.153 30.492 1.00 70.44 O
ATOM 25 O5' G A2080 114.876 105.351 29.829 1.00 72.27 O
TER
ATOM 1 O3' A B2104 116.772 107.714 38.725 1.00 65.39 O
ATOM 2 P C B2105 115.991 106.628 39.620 1.00 64.97 P
ATOM 3 OP1 C B2105 116.751 105.340 39.621 1.00 63.61 O
ATOM 4 OP2 C B2105 114.577 106.643 39.161 1.00 61.72 O
ATOM 5 O5' C B2105 116.037 107.274 41.080 1.00 62.71 O
ATOM 6 C5' C B2105 117.091 106.953 42.007 1.00 59.78 C
ATOM 7 C4' C B2105 117.502 108.177 42.801 1.00 58.38 C
ATOM 8 O4' C B2105 118.151 109.141 41.928 1.00 57.99 O
ATOM 9 C3' C B2105 116.400 108.995 43.455 1.00 58.36 C
ATOM 10 O3' C B2105 115.911 108.409 44.662 1.00 57.54 O
ATOM 11 C2' C B2105 117.112 110.320 43.714 1.00 56.95 C
ATOM 12 O2' C B2105 117.963 110.275 44.838 1.00 57.23 O
ATOM 13 C1' C B2105 117.980 110.446 42.461 1.00 56.00 C
ATOM 14 N1 C B2105 117.411 111.338 41.428 1.00 54.82 N
ATOM 15 C2 C B2105 117.477 112.729 41.636 1.00 54.46 C
ATOM 16 O2 C B2105 117.999 113.161 42.679 1.00 56.55 O
ATOM 17 N3 C B2105 116.975 113.563 40.699 1.00 51.83 N
ATOM 18 C4 C B2105 116.429 113.068 39.589 1.00 51.43 C
ATOM 19 N4 C B2105 115.957 113.937 38.693 1.00 50.15 N
ATOM 20 C5 C B2105 116.341 111.661 39.350 1.00 51.12 C
ATOM 21 C6 C B2105 116.837 110.840 40.289 1.00 52.81 C
ATOM 22 P A B2106 114.413 108.740 45.165 1.00 56.79 P
ATOM 23 OP1 A B2106 114.287 108.178 46.529 1.00 58.43 O
ATOM 24 OP2 A B2106 113.445 108.336 44.116 1.00 56.86 O
ATOM 25 O5' A B2106 114.372 110.329 45.278 1.00 56.56 O
TER
ATOM 2 P U A2079 110.314 110.386 31.283 1.00 66.49 P
ATOM 3 OP1 U A2079 111.254 111.148 32.137 1.00 67.61 O
ATOM 4 OP2 U A2079 110.064 110.837 29.886 1.00 67.08 O
ATOM 5 O5' U A2079 110.848 108.888 31.256 1.00 63.52 O
ATOM 6 C5' U A2079 112.041 108.566 30.529 1.00 63.86 C
ATOM 7 C4' U A2079 112.886 107.578 31.297 1.00 63.83 C
ATOM 8 O4' U A2079 113.389 108.202 32.510 1.00 62.84 O
ATOM 9 C3' U A2079 112.204 106.281 31.734 1.00 64.93 C
ATOM 10 O3' U A2079 113.152 105.214 31.666 1.00 68.98 O
ATOM 11 C2' U A2079 111.906 106.552 33.207 1.00 63.68 C
ATOM 12 O2' U A2079 111.832 105.373 33.986 1.00 65.78 O
ATOM 13 C1' U A2079 113.149 107.341 33.599 1.00 61.94 C
ATOM 14 N1 U A2079 113.068 108.125 34.841 1.00 59.52 N
ATOM 15 C2 U A2079 113.653 107.582 35.971 1.00 58.48 C
ATOM 16 O2 U A2079 114.150 106.466 35.999 1.00 60.51 O
ATOM 17 N3 U A2079 113.640 108.391 37.072 1.00 57.66 N
ATOM 18 C4 U A2079 113.103 109.647 37.171 1.00 56.84 C
ATOM 19 O4 U A2079 113.208 110.260 38.232 1.00 57.50 O
ATOM 20 C5 U A2079 112.461 110.118 35.985 1.00 57.24 C
ATOM 21 C6 U A2079 112.465 109.360 34.886 1.00 58.45 C
ATOM 22 P G A2080 113.543 104.567 30.241 1.00 71.81 P
ATOM 23 OP1 G A2080 112.454 104.883 29.262 1.00 68.25 O
ATOM 24 OP2 G A2080 113.919 103.153 30.492 1.00 70.44 O
ATOM 25 O5' G A2080 114.876 105.351 29.829 1.00 72.27 O
TER
ATOM 1 O3' A B2104 116.772 107.714 38.725 1.00 65.39 O
ATOM 2 P C B2105 115.991 106.628 39.620 1.00 64.97 P
ATOM 3 OP1 C B2105 116.751 105.340 39.621 1.00 63.61 O
ATOM 4 OP2 C B2105 114.577 106.643 39.161 1.00 61.72 O
ATOM 5 O5' C B2105 116.037 107.274 41.080 1.00 62.71 O
ATOM 6 C5' C B2105 117.091 106.953 42.007 1.00 59.78 C
ATOM 7 C4' C B2105 117.502 108.177 42.801 1.00 58.38 C
ATOM 8 O4' C B2105 118.151 109.141 41.928 1.00 57.99 O
ATOM 9 C3' C B2105 116.400 108.995 43.455 1.00 58.36 C
ATOM 10 O3' C B2105 115.911 108.409 44.662 1.00 57.54 O
ATOM 11 C2' C B2105 117.112 110.320 43.714 1.00 56.95 C
ATOM 12 O2' C B2105 117.963 110.275 44.838 1.00 57.23 O
ATOM 13 C1' C B2105 117.980 110.446 42.461 1.00 56.00 C
ATOM 14 N1 C B2105 117.411 111.338 41.428 1.00 54.82 N
ATOM 15 C2 C B2105 117.477 112.729 41.636 1.00 54.46 C
ATOM 16 O2 C B2105 117.999 113.161 42.679 1.00 56.55 O
ATOM 17 N3 C B2105 116.975 113.563 40.699 1.00 51.83 N
ATOM 18 C4 C B2105 116.429 113.068 39.589 1.00 51.43 C
ATOM 19 N4 C B2105 115.957 113.937 38.693 1.00 50.15 N
ATOM 20 C5 C B2105 116.341 111.661 39.350 1.00 51.12 C
ATOM 21 C6 C B2105 116.837 110.840 40.289 1.00 52.81 C
ATOM 22 P A B2106 114.413 108.740 45.165 1.00 56.79 P
ATOM 23 OP1 A B2106 114.287 108.178 46.529 1.00 58.43 O
ATOM 24 OP2 A B2106 113.445 108.336 44.116 1.00 56.86 O
ATOM 25 O5' A B2106 114.372 110.329 45.278 1.00 56.56 O
TER
Atoms:
C4: (113.103,109.647,37.171)
N3: (113.640,108.391,37.072)
OP1: (111.254,111.148,32.137)
OP2: (110.064,110.837,29.886)
C2: (113.653,107.582,35.971)
C1': (113.149,107.341,33.599)
C3': (112.204,106.281,31.734)
O5': (110.848,108.888,31.256)
O4': (113.389,108.202,32.510)
C5': (112.041,108.566,30.529)
P: (110.314,110.386,31.283)
C4': (112.886,107.578,31.297)
C2': (111.906,106.552,33.207)
O2': (111.832,105.373,33.986)
N1: (113.068,108.125,34.841)
O4: (113.208,110.260,38.232)
O2: (114.150,106.466,35.999)
C6: (112.465,109.360,34.886)
C5: (112.461,110.118,35.985)
O3': (113.152,105.214,31.666)
N3: (113.640,108.391,37.072)
OP1: (111.254,111.148,32.137)
OP2: (110.064,110.837,29.886)
C2: (113.653,107.582,35.971)
C1': (113.149,107.341,33.599)
C3': (112.204,106.281,31.734)
O5': (110.848,108.888,31.256)
O4': (113.389,108.202,32.510)
C5': (112.041,108.566,30.529)
P: (110.314,110.386,31.283)
C4': (112.886,107.578,31.297)
C2': (111.906,106.552,33.207)
O2': (111.832,105.373,33.986)
N1: (113.068,108.125,34.841)
O4: (113.208,110.260,38.232)
O2: (114.150,106.466,35.999)
C6: (112.465,109.360,34.886)
C5: (112.461,110.118,35.985)
O3': (113.152,105.214,31.666)
C2: (117.477,112.729,41.636)
OP1: (116.751,105.340,39.621)
OP2: (114.577,106.643,39.161)
C4: (116.429,113.068,39.589)
O5': (116.037,107.274,41.080)
C3': (116.400,108.995,43.455)
C1': (117.980,110.446,42.461)
O4': (118.151,109.141,41.928)
C5': (117.091,106.953,42.007)
P: (115.991,106.628,39.620)
O2: (117.999,113.161,42.679)
C4': (117.502,108.177,42.801)
C2': (117.112,110.320,43.714)
O2': (117.963,110.275,44.838)
N1: (117.411,111.338,41.428)
N3: (116.975,113.563,40.699)
N4: (115.957,113.937,38.693)
C6: (116.837,110.840,40.289)
C5: (116.341,111.661,39.350)
O3': (115.911,108.409,44.662)
OP1: (116.751,105.340,39.621)
OP2: (114.577,106.643,39.161)
C4: (116.429,113.068,39.589)
O5': (116.037,107.274,41.080)
C3': (116.400,108.995,43.455)
C1': (117.980,110.446,42.461)
O4': (118.151,109.141,41.928)
C5': (117.091,106.953,42.007)
P: (115.991,106.628,39.620)
O2: (117.999,113.161,42.679)
C4': (117.502,108.177,42.801)
C2': (117.112,110.320,43.714)
O2': (117.963,110.275,44.838)
N1: (117.411,111.338,41.428)
N3: (116.975,113.563,40.699)
N4: (115.957,113.937,38.693)
C6: (116.837,110.840,40.289)
C5: (116.341,111.661,39.350)
O3': (115.911,108.409,44.662)
Image (generated by PyMOL):