Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0306:0327
Extra
PDB:
ATOM 1 O3' A A 305 9.183 142.170 40.520 1.00 49.55 O
ATOM 2 P U A 306 9.356 141.854 38.959 1.00 52.25 P
ATOM 3 OP1 U A 306 9.996 143.031 38.335 1.00 52.26 O
ATOM 4 OP2 U A 306 8.045 141.368 38.448 1.00 52.09 O
ATOM 5 O5' U A 306 10.420 140.663 38.934 1.00 54.34 O
ATOM 6 C5' U A 306 10.027 139.284 38.717 1.00 57.15 C
ATOM 7 C4' U A 306 10.799 138.356 39.641 1.00 59.35 C
ATOM 8 O4' U A 306 12.224 138.617 39.501 1.00 60.03 O
ATOM 9 C3' U A 306 10.533 138.529 41.134 1.00 61.28 C
ATOM 10 O3' U A 306 9.309 137.903 41.610 1.00 61.10 O
ATOM 11 C2' U A 306 11.824 138.064 41.804 1.00 62.48 C
ATOM 12 O2' U A 306 11.894 136.688 42.088 1.00 67.03 O
ATOM 13 C1' U A 306 12.875 138.403 40.746 1.00 62.17 C
ATOM 14 N1 U A 306 13.759 139.540 41.054 1.00 62.48 N
ATOM 15 C2 U A 306 15.092 139.264 41.330 1.00 63.03 C
ATOM 16 O2 U A 306 15.555 138.135 41.337 1.00 63.15 O
ATOM 17 N3 U A 306 15.867 140.363 41.602 1.00 63.35 N
ATOM 18 C4 U A 306 15.463 141.678 41.626 1.00 64.63 C
ATOM 19 O4 U A 306 16.291 142.563 41.862 1.00 65.79 O
ATOM 20 C5 U A 306 14.078 141.880 41.339 1.00 64.31 C
ATOM 21 C6 U A 306 13.294 140.831 41.071 1.00 63.83 C
ATOM 22 P A A 307 8.958 136.344 41.272 1.00 58.55 P
ATOM 23 OP1 A A 307 10.148 135.519 40.936 1.00 58.16 O
ATOM 24 OP2 A A 307 7.826 136.397 40.316 1.00 59.59 O
ATOM 25 O5' A A 307 8.349 135.778 42.629 1.00 55.61 O
TER
ATOM 1 O3' C B 326 14.618 133.272 42.022 1.00 40.92 O
ATOM 2 P A B 327 15.320 133.274 40.596 1.00 39.81 P
ATOM 3 OP1 A B 327 15.131 131.945 39.976 1.00 40.92 O
ATOM 4 OP2 A B 327 16.685 133.810 40.769 1.00 41.90 O
ATOM 5 O5' A B 327 14.481 134.360 39.792 1.00 42.27 O
ATOM 6 C5' A B 327 13.146 134.079 39.346 1.00 40.61 C
ATOM 7 C4' A B 327 12.999 134.463 37.898 1.00 40.81 C
ATOM 8 O4' A B 327 12.917 135.909 37.788 1.00 41.70 O
ATOM 9 C3' A B 327 14.152 134.034 36.991 1.00 40.91 C
ATOM 10 O3' A B 327 13.641 133.737 35.696 1.00 42.19 O
ATOM 11 C2' A B 327 14.983 135.313 36.910 1.00 41.73 C
ATOM 12 O2' A B 327 15.811 135.391 35.770 1.00 41.84 O
ATOM 13 C1' A B 327 13.871 136.353 36.851 1.00 42.43 C
ATOM 14 N9 A B 327 14.204 137.740 37.155 1.00 44.24 N
ATOM 15 C8 A B 327 15.202 138.259 37.940 1.00 44.64 C
ATOM 16 N7 A B 327 15.185 139.568 38.016 1.00 45.89 N
ATOM 17 C5 A B 327 14.106 139.934 37.221 1.00 46.95 C
ATOM 18 C6 A B 327 13.545 141.188 36.890 1.00 48.22 C
ATOM 19 N6 A B 327 14.009 142.358 37.341 1.00 49.24 N
ATOM 20 N1 A B 327 12.472 141.196 36.069 1.00 47.41 N
ATOM 21 C2 A B 327 12.001 140.027 35.621 1.00 46.68 C
ATOM 22 N3 A B 327 12.435 138.794 35.863 1.00 45.41 N
ATOM 23 C4 A B 327 13.501 138.817 36.680 1.00 45.53 C
ATOM 24 P A B 328 13.221 132.234 35.323 1.00 43.12 P
ATOM 25 OP1 A B 328 11.745 132.233 35.149 1.00 42.03 O
ATOM 26 OP2 A B 328 13.855 131.293 36.289 1.00 43.06 O
ATOM 27 O5' A B 328 13.885 131.998 33.897 1.00 41.30 O
TER
ATOM 2 P U A 306 9.356 141.854 38.959 1.00 52.25 P
ATOM 3 OP1 U A 306 9.996 143.031 38.335 1.00 52.26 O
ATOM 4 OP2 U A 306 8.045 141.368 38.448 1.00 52.09 O
ATOM 5 O5' U A 306 10.420 140.663 38.934 1.00 54.34 O
ATOM 6 C5' U A 306 10.027 139.284 38.717 1.00 57.15 C
ATOM 7 C4' U A 306 10.799 138.356 39.641 1.00 59.35 C
ATOM 8 O4' U A 306 12.224 138.617 39.501 1.00 60.03 O
ATOM 9 C3' U A 306 10.533 138.529 41.134 1.00 61.28 C
ATOM 10 O3' U A 306 9.309 137.903 41.610 1.00 61.10 O
ATOM 11 C2' U A 306 11.824 138.064 41.804 1.00 62.48 C
ATOM 12 O2' U A 306 11.894 136.688 42.088 1.00 67.03 O
ATOM 13 C1' U A 306 12.875 138.403 40.746 1.00 62.17 C
ATOM 14 N1 U A 306 13.759 139.540 41.054 1.00 62.48 N
ATOM 15 C2 U A 306 15.092 139.264 41.330 1.00 63.03 C
ATOM 16 O2 U A 306 15.555 138.135 41.337 1.00 63.15 O
ATOM 17 N3 U A 306 15.867 140.363 41.602 1.00 63.35 N
ATOM 18 C4 U A 306 15.463 141.678 41.626 1.00 64.63 C
ATOM 19 O4 U A 306 16.291 142.563 41.862 1.00 65.79 O
ATOM 20 C5 U A 306 14.078 141.880 41.339 1.00 64.31 C
ATOM 21 C6 U A 306 13.294 140.831 41.071 1.00 63.83 C
ATOM 22 P A A 307 8.958 136.344 41.272 1.00 58.55 P
ATOM 23 OP1 A A 307 10.148 135.519 40.936 1.00 58.16 O
ATOM 24 OP2 A A 307 7.826 136.397 40.316 1.00 59.59 O
ATOM 25 O5' A A 307 8.349 135.778 42.629 1.00 55.61 O
TER
ATOM 1 O3' C B 326 14.618 133.272 42.022 1.00 40.92 O
ATOM 2 P A B 327 15.320 133.274 40.596 1.00 39.81 P
ATOM 3 OP1 A B 327 15.131 131.945 39.976 1.00 40.92 O
ATOM 4 OP2 A B 327 16.685 133.810 40.769 1.00 41.90 O
ATOM 5 O5' A B 327 14.481 134.360 39.792 1.00 42.27 O
ATOM 6 C5' A B 327 13.146 134.079 39.346 1.00 40.61 C
ATOM 7 C4' A B 327 12.999 134.463 37.898 1.00 40.81 C
ATOM 8 O4' A B 327 12.917 135.909 37.788 1.00 41.70 O
ATOM 9 C3' A B 327 14.152 134.034 36.991 1.00 40.91 C
ATOM 10 O3' A B 327 13.641 133.737 35.696 1.00 42.19 O
ATOM 11 C2' A B 327 14.983 135.313 36.910 1.00 41.73 C
ATOM 12 O2' A B 327 15.811 135.391 35.770 1.00 41.84 O
ATOM 13 C1' A B 327 13.871 136.353 36.851 1.00 42.43 C
ATOM 14 N9 A B 327 14.204 137.740 37.155 1.00 44.24 N
ATOM 15 C8 A B 327 15.202 138.259 37.940 1.00 44.64 C
ATOM 16 N7 A B 327 15.185 139.568 38.016 1.00 45.89 N
ATOM 17 C5 A B 327 14.106 139.934 37.221 1.00 46.95 C
ATOM 18 C6 A B 327 13.545 141.188 36.890 1.00 48.22 C
ATOM 19 N6 A B 327 14.009 142.358 37.341 1.00 49.24 N
ATOM 20 N1 A B 327 12.472 141.196 36.069 1.00 47.41 N
ATOM 21 C2 A B 327 12.001 140.027 35.621 1.00 46.68 C
ATOM 22 N3 A B 327 12.435 138.794 35.863 1.00 45.41 N
ATOM 23 C4 A B 327 13.501 138.817 36.680 1.00 45.53 C
ATOM 24 P A B 328 13.221 132.234 35.323 1.00 43.12 P
ATOM 25 OP1 A B 328 11.745 132.233 35.149 1.00 42.03 O
ATOM 26 OP2 A B 328 13.855 131.293 36.289 1.00 43.06 O
ATOM 27 O5' A B 328 13.885 131.998 33.897 1.00 41.30 O
TER
Atoms:
C4: (15.463,141.678,41.626)
N3: (15.867,140.363,41.602)
OP1: (9.996,143.031,38.335)
OP2: (8.045,141.368,38.448)
C2: (15.092,139.264,41.330)
C1': (12.875,138.403,40.746)
C3': (10.533,138.529,41.134)
O5': (10.420,140.663,38.934)
O4': (12.224,138.617,39.501)
C5': (10.027,139.284,38.717)
P: (9.356,141.854,38.959)
C4': (10.799,138.356,39.641)
C2': (11.824,138.064,41.804)
O2': (11.894,136.688,42.088)
N1: (13.759,139.540,41.054)
O4: (16.291,142.563,41.862)
O2: (15.555,138.135,41.337)
C6: (13.294,140.831,41.071)
C5: (14.078,141.880,41.339)
O3': (9.309,137.903,41.610)
N3: (15.867,140.363,41.602)
OP1: (9.996,143.031,38.335)
OP2: (8.045,141.368,38.448)
C2: (15.092,139.264,41.330)
C1': (12.875,138.403,40.746)
C3': (10.533,138.529,41.134)
O5': (10.420,140.663,38.934)
O4': (12.224,138.617,39.501)
C5': (10.027,139.284,38.717)
P: (9.356,141.854,38.959)
C4': (10.799,138.356,39.641)
C2': (11.824,138.064,41.804)
O2': (11.894,136.688,42.088)
N1: (13.759,139.540,41.054)
O4: (16.291,142.563,41.862)
O2: (15.555,138.135,41.337)
C6: (13.294,140.831,41.071)
C5: (14.078,141.880,41.339)
O3': (9.309,137.903,41.610)
OP1: (15.131,131.945,39.976)
OP2: (16.685,133.810,40.769)
C3': (14.152,134.034,36.991)
C1': (13.871,136.353,36.851)
C5': (13.146,134.079,39.346)
O4': (12.917,135.909,37.788)
C8: (15.202,138.259,37.940)
O2': (15.811,135.391,35.770)
C6: (13.545,141.188,36.890)
C5: (14.106,139.934,37.221)
C4: (13.501,138.817,36.680)
P: (15.320,133.274,40.596)
C4': (12.999,134.463,37.898)
C2': (14.983,135.313,36.910)
C2: (12.001,140.027,35.621)
N1: (12.472,141.196,36.069)
N3: (12.435,138.794,35.863)
N6: (14.009,142.358,37.341)
N7: (15.185,139.568,38.016)
N9: (14.204,137.740,37.155)
O5': (14.481,134.360,39.792)
O3': (13.641,133.737,35.696)
OP2: (16.685,133.810,40.769)
C3': (14.152,134.034,36.991)
C1': (13.871,136.353,36.851)
C5': (13.146,134.079,39.346)
O4': (12.917,135.909,37.788)
C8: (15.202,138.259,37.940)
O2': (15.811,135.391,35.770)
C6: (13.545,141.188,36.890)
C5: (14.106,139.934,37.221)
C4: (13.501,138.817,36.680)
P: (15.320,133.274,40.596)
C4': (12.999,134.463,37.898)
C2': (14.983,135.313,36.910)
C2: (12.001,140.027,35.621)
N1: (12.472,141.196,36.069)
N3: (12.435,138.794,35.863)
N6: (14.009,142.358,37.341)
N7: (15.185,139.568,38.016)
N9: (14.204,137.740,37.155)
O5': (14.481,134.360,39.792)
O3': (13.641,133.737,35.696)
Image (generated by PyMOL):