ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCV:B68:B70

Extra

PDB:
ATOM 1 O3' G A 67 24.337 2.553 11.701 1.00 34.53 O
ATOM 2 P U A 68 23.867 3.315 13.032 1.00 39.24 P
ATOM 3 OP1 U A 68 23.614 4.741 12.713 1.00 39.10 O
ATOM 4 OP2 U A 68 24.839 2.957 14.091 1.00 37.85 O
ATOM 5 O5' U A 68 22.486 2.600 13.395 1.00 39.58 O
ATOM 6 C5' U A 68 21.250 3.091 12.881 1.00 40.98 C
ATOM 7 C4' U A 68 20.161 2.041 12.997 1.00 42.56 C
ATOM 8 O4' U A 68 20.403 0.966 12.052 1.00 41.69 O
ATOM 9 C3' U A 68 20.171 1.391 14.380 1.00 44.24 C
ATOM 10 O3' U A 68 18.862 1.265 14.935 1.00 50.36 O
ATOM 11 C2' U A 68 20.928 0.075 14.220 1.00 42.84 C
ATOM 12 O2' U A 68 20.335 -0.970 14.958 1.00 42.62 O
ATOM 13 C1' U A 68 20.690 -0.226 12.743 1.00 42.12 C
ATOM 14 N1 U A 68 21.637 -1.049 11.981 1.00 41.51 N
ATOM 15 C2 U A 68 21.345 -2.397 11.898 1.00 42.74 C
ATOM 16 O2 U A 68 20.381 -2.895 12.462 1.00 39.02 O
ATOM 17 N3 U A 68 22.215 -3.135 11.132 1.00 41.10 N
ATOM 18 C4 U A 68 23.332 -2.669 10.462 1.00 42.28 C
ATOM 19 O4 U A 68 24.015 -3.457 9.800 1.00 43.09 O
ATOM 20 C5 U A 68 23.578 -1.265 10.617 1.00 39.22 C
ATOM 21 C6 U A 68 22.743 -0.522 11.356 1.00 42.42 C
ATOM 22 P U A 69 18.491 1.986 16.316 1.00 51.86 P
ATOM 23 OP1 U A 69 19.674 1.945 17.215 1.00 52.51 O
ATOM 24 OP2 U A 69 17.220 1.356 16.750 1.00 52.22 O
ATOM 25 O5' U A 69 18.179 3.488 15.877 1.00 53.11 O
TER

ATOM 1 O3' U B 69 17.529 6.759 13.062 1.00 49.65 O
ATOM 2 P A B 70 16.968 6.226 11.663 1.00 48.56 P
ATOM 3 OP1 A B 70 16.599 7.404 10.844 1.00 47.74 O
ATOM 4 OP2 A B 70 15.949 5.188 11.960 1.00 48.48 O
ATOM 5 O5' A B 70 18.228 5.526 10.990 1.00 45.68 O
ATOM 6 C5' A B 70 19.342 6.292 10.543 1.00 40.16 C
ATOM 7 C4' A B 70 20.009 5.582 9.399 1.00 36.69 C
ATOM 8 O4' A B 70 20.391 4.259 9.859 1.00 35.24 O
ATOM 9 C3' A B 70 19.087 5.334 8.218 1.00 35.17 C
ATOM 10 O3' A B 70 19.134 6.449 7.322 1.00 34.31 O
ATOM 11 C2' A B 70 19.662 4.061 7.599 1.00 35.12 C
ATOM 12 O2' A B 70 20.751 4.301 6.737 1.00 34.67 O
ATOM 13 C1' A B 70 20.170 3.312 8.834 1.00 35.57 C
ATOM 14 N9 A B 70 19.284 2.270 9.353 1.00 33.26 N
ATOM 15 C8 A B 70 18.090 2.410 10.014 1.00 32.94 C
ATOM 16 N7 A B 70 17.552 1.269 10.381 1.00 31.92 N
ATOM 17 C5 A B 70 18.448 0.315 9.924 1.00 33.53 C
ATOM 18 C6 A B 70 18.458 -1.091 9.996 1.00 35.20 C
ATOM 19 N6 A B 70 17.499 -1.811 10.579 1.00 34.76 N
ATOM 20 N1 A B 70 19.501 -1.741 9.440 1.00 33.09 N
ATOM 21 C2 A B 70 20.462 -1.022 8.852 1.00 33.93 C
ATOM 22 N3 A B 70 20.567 0.298 8.717 1.00 31.73 N
ATOM 23 C4 A B 70 19.516 0.916 9.282 1.00 32.95 C
ATOM 24 P G B 71 17.786 6.961 6.606 1.00 35.36 P
ATOM 25 OP1 G B 71 16.883 7.493 7.662 1.00 36.80 O
ATOM 26 OP2 G B 71 17.315 5.866 5.717 1.00 35.82 O
ATOM 27 O5' G B 71 18.262 8.162 5.670 1.00 33.69 O
TER

Atoms:
C4: (23.332,-2.669,10.462)
N3: (22.215,-3.135,11.132)
OP1: (23.614,4.741,12.713)
OP2: (24.839,2.957,14.091)
C2: (21.345,-2.397,11.898)
C1': (20.690,-0.226,12.743)
C3': (20.171,1.391,14.380)
O5': (22.486,2.600,13.395)
O4': (20.403,0.966,12.052)
C5': (21.250,3.091,12.881)
P: (23.867,3.315,13.032)
C4': (20.161,2.041,12.997)
C2': (20.928,0.075,14.220)
O2': (20.335,-0.970,14.958)
N1: (21.637,-1.049,11.981)
O4: (24.015,-3.457,9.800)
O2: (20.381,-2.895,12.462)
C6: (22.743,-0.522,11.356)
C5: (23.578,-1.265,10.617)
O3': (18.862,1.265,14.935)
OP1: (16.599,7.404,10.844)
OP2: (15.949,5.188,11.960)
C3': (19.087,5.334,8.218)
C1': (20.170,3.312,8.834)
C5': (19.342,6.292,10.543)
O4': (20.391,4.259,9.859)
C8: (18.090,2.410,10.014)
O2': (20.751,4.301,6.737)
C6: (18.458,-1.091,9.996)
C5: (18.448,0.315,9.924)
C4: (19.516,0.916,9.282)
P: (16.968,6.226,11.663)
C4': (20.009,5.582,9.399)
C2': (19.662,4.061,7.599)
C2: (20.462,-1.022,8.852)
N1: (19.501,-1.741,9.440)
N3: (20.567,0.298,8.717)
N6: (17.499,-1.811,10.579)
N7: (17.552,1.269,10.381)
N9: (19.284,2.270,9.353)
O5': (18.228,5.526,10.990)
O3': (19.134,6.449,7.322)
Image (generated by PyMOL):
PyMOL image
show in jmol