Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 91.298 119.348 3.241 1.00 52.88 O
ATOM 2 P U A 253 89.974 119.083 4.105 1.00 53.08 P
ATOM 3 OP1 U A 253 90.234 119.581 5.478 1.00 53.67 O
ATOM 4 OP2 U A 253 89.592 117.662 3.901 1.00 52.82 O
ATOM 5 O5' U A 253 88.878 120.022 3.429 1.00 53.70 O
ATOM 6 C5' U A 253 88.756 121.408 3.796 1.00 54.85 C
ATOM 7 C4' U A 253 88.333 122.218 2.597 1.00 55.85 C
ATOM 8 O4' U A 253 89.445 122.339 1.674 1.00 56.21 O
ATOM 9 C3' U A 253 87.238 121.572 1.772 1.00 56.47 C
ATOM 10 O3' U A 253 85.955 121.828 2.309 1.00 57.63 O
ATOM 11 C2' U A 253 87.441 122.192 0.398 1.00 56.09 C
ATOM 12 O2' U A 253 86.863 123.477 0.277 1.00 56.35 O
ATOM 13 C1' U A 253 88.969 122.281 0.339 1.00 56.02 C
ATOM 14 N1 U A 253 89.598 121.122 -0.308 1.00 56.10 N
ATOM 15 C2 U A 253 89.347 120.906 -1.659 1.00 56.34 C
ATOM 16 O2 U A 253 88.628 121.634 -2.334 1.00 56.48 O
ATOM 17 N3 U A 253 89.971 119.806 -2.191 1.00 55.70 N
ATOM 18 C4 U A 253 90.799 118.922 -1.532 1.00 56.37 C
ATOM 19 O4 U A 253 91.269 117.963 -2.146 1.00 57.14 O
ATOM 20 C5 U A 253 91.008 119.214 -0.144 1.00 56.32 C
ATOM 21 C6 U A 253 90.415 120.276 0.406 1.00 55.67 C
ATOM 22 P G A 254 84.871 120.651 2.341 1.00 59.24 P
ATOM 23 OP1 G A 254 83.573 121.237 2.796 1.00 58.59 O
ATOM 24 OP2 G A 254 85.476 119.517 3.077 1.00 57.96 O
ATOM 25 O5' G A 254 84.711 120.219 0.816 1.00 59.56 O
TER
ATOM 1 O3' G B 234 93.784 117.732 -7.963 1.00 63.54 O
ATOM 2 P A B 235 94.319 118.777 -9.058 1.00 62.67 P
ATOM 3 OP1 A B 235 93.916 118.261 -10.395 1.00 63.17 O
ATOM 4 OP2 A B 235 95.755 119.027 -8.764 1.00 61.57 O
ATOM 5 O5' A B 235 93.482 120.098 -8.776 1.00 60.95 O
ATOM 6 C5' A B 235 92.083 120.172 -9.105 1.00 60.13 C
ATOM 7 C4' A B 235 91.468 121.351 -8.400 1.00 60.19 C
ATOM 8 O4' A B 235 91.360 121.062 -6.976 1.00 59.66 O
ATOM 9 C3' A B 235 92.324 122.608 -8.505 1.00 59.48 C
ATOM 10 O3' A B 235 91.485 123.741 -8.413 1.00 60.40 O
ATOM 11 C2' A B 235 93.186 122.512 -7.255 1.00 59.44 C
ATOM 12 O2' A B 235 93.731 123.748 -6.840 1.00 57.35 O
ATOM 13 C1' A B 235 92.166 121.972 -6.253 1.00 59.37 C
ATOM 14 N9 A B 235 92.768 121.269 -5.124 1.00 58.73 N
ATOM 15 C8 A B 235 93.518 120.115 -5.120 1.00 58.20 C
ATOM 16 N7 A B 235 93.945 119.768 -3.931 1.00 57.96 N
ATOM 17 C5 A B 235 93.437 120.756 -3.095 1.00 57.95 C
ATOM 18 C6 A B 235 93.545 120.975 -1.715 1.00 56.90 C
ATOM 19 N6 A B 235 94.233 120.184 -0.894 1.00 56.89 N
ATOM 20 N1 A B 235 92.919 122.054 -1.201 1.00 56.31 N
ATOM 21 C2 A B 235 92.235 122.855 -2.024 1.00 56.72 C
ATOM 22 N3 A B 235 92.063 122.760 -3.335 1.00 57.17 N
ATOM 23 C4 A B 235 92.700 121.678 -3.816 1.00 58.11 C
ATOM 24 P A B 236 90.936 124.418 -9.750 1.00 60.84 P
ATOM 25 OP1 A B 236 92.020 124.291 -10.761 1.00 60.74 O
ATOM 26 OP2 A B 236 90.385 125.759 -9.406 1.00 60.72 O
ATOM 27 O5' A B 236 89.712 123.497 -10.173 1.00 60.60 O
TER
ATOM 2 P U A 253 89.974 119.083 4.105 1.00 53.08 P
ATOM 3 OP1 U A 253 90.234 119.581 5.478 1.00 53.67 O
ATOM 4 OP2 U A 253 89.592 117.662 3.901 1.00 52.82 O
ATOM 5 O5' U A 253 88.878 120.022 3.429 1.00 53.70 O
ATOM 6 C5' U A 253 88.756 121.408 3.796 1.00 54.85 C
ATOM 7 C4' U A 253 88.333 122.218 2.597 1.00 55.85 C
ATOM 8 O4' U A 253 89.445 122.339 1.674 1.00 56.21 O
ATOM 9 C3' U A 253 87.238 121.572 1.772 1.00 56.47 C
ATOM 10 O3' U A 253 85.955 121.828 2.309 1.00 57.63 O
ATOM 11 C2' U A 253 87.441 122.192 0.398 1.00 56.09 C
ATOM 12 O2' U A 253 86.863 123.477 0.277 1.00 56.35 O
ATOM 13 C1' U A 253 88.969 122.281 0.339 1.00 56.02 C
ATOM 14 N1 U A 253 89.598 121.122 -0.308 1.00 56.10 N
ATOM 15 C2 U A 253 89.347 120.906 -1.659 1.00 56.34 C
ATOM 16 O2 U A 253 88.628 121.634 -2.334 1.00 56.48 O
ATOM 17 N3 U A 253 89.971 119.806 -2.191 1.00 55.70 N
ATOM 18 C4 U A 253 90.799 118.922 -1.532 1.00 56.37 C
ATOM 19 O4 U A 253 91.269 117.963 -2.146 1.00 57.14 O
ATOM 20 C5 U A 253 91.008 119.214 -0.144 1.00 56.32 C
ATOM 21 C6 U A 253 90.415 120.276 0.406 1.00 55.67 C
ATOM 22 P G A 254 84.871 120.651 2.341 1.00 59.24 P
ATOM 23 OP1 G A 254 83.573 121.237 2.796 1.00 58.59 O
ATOM 24 OP2 G A 254 85.476 119.517 3.077 1.00 57.96 O
ATOM 25 O5' G A 254 84.711 120.219 0.816 1.00 59.56 O
TER
ATOM 1 O3' G B 234 93.784 117.732 -7.963 1.00 63.54 O
ATOM 2 P A B 235 94.319 118.777 -9.058 1.00 62.67 P
ATOM 3 OP1 A B 235 93.916 118.261 -10.395 1.00 63.17 O
ATOM 4 OP2 A B 235 95.755 119.027 -8.764 1.00 61.57 O
ATOM 5 O5' A B 235 93.482 120.098 -8.776 1.00 60.95 O
ATOM 6 C5' A B 235 92.083 120.172 -9.105 1.00 60.13 C
ATOM 7 C4' A B 235 91.468 121.351 -8.400 1.00 60.19 C
ATOM 8 O4' A B 235 91.360 121.062 -6.976 1.00 59.66 O
ATOM 9 C3' A B 235 92.324 122.608 -8.505 1.00 59.48 C
ATOM 10 O3' A B 235 91.485 123.741 -8.413 1.00 60.40 O
ATOM 11 C2' A B 235 93.186 122.512 -7.255 1.00 59.44 C
ATOM 12 O2' A B 235 93.731 123.748 -6.840 1.00 57.35 O
ATOM 13 C1' A B 235 92.166 121.972 -6.253 1.00 59.37 C
ATOM 14 N9 A B 235 92.768 121.269 -5.124 1.00 58.73 N
ATOM 15 C8 A B 235 93.518 120.115 -5.120 1.00 58.20 C
ATOM 16 N7 A B 235 93.945 119.768 -3.931 1.00 57.96 N
ATOM 17 C5 A B 235 93.437 120.756 -3.095 1.00 57.95 C
ATOM 18 C6 A B 235 93.545 120.975 -1.715 1.00 56.90 C
ATOM 19 N6 A B 235 94.233 120.184 -0.894 1.00 56.89 N
ATOM 20 N1 A B 235 92.919 122.054 -1.201 1.00 56.31 N
ATOM 21 C2 A B 235 92.235 122.855 -2.024 1.00 56.72 C
ATOM 22 N3 A B 235 92.063 122.760 -3.335 1.00 57.17 N
ATOM 23 C4 A B 235 92.700 121.678 -3.816 1.00 58.11 C
ATOM 24 P A B 236 90.936 124.418 -9.750 1.00 60.84 P
ATOM 25 OP1 A B 236 92.020 124.291 -10.761 1.00 60.74 O
ATOM 26 OP2 A B 236 90.385 125.759 -9.406 1.00 60.72 O
ATOM 27 O5' A B 236 89.712 123.497 -10.173 1.00 60.60 O
TER
Atoms:
C4: (90.799,118.922,-1.532)
N3: (89.971,119.806,-2.191)
OP1: (90.234,119.581,5.478)
OP2: (89.592,117.662,3.901)
C2: (89.347,120.906,-1.659)
C1': (88.969,122.281,0.339)
C3': (87.238,121.572,1.772)
O5': (88.878,120.022,3.429)
O4': (89.445,122.339,1.674)
C5': (88.756,121.408,3.796)
P: (89.974,119.083,4.105)
C4': (88.333,122.218,2.597)
C2': (87.441,122.192,0.398)
O2': (86.863,123.477,0.277)
N1: (89.598,121.122,-0.308)
O4: (91.269,117.963,-2.146)
O2: (88.628,121.634,-2.334)
C6: (90.415,120.276,0.406)
C5: (91.008,119.214,-0.144)
O3': (85.955,121.828,2.309)
N3: (89.971,119.806,-2.191)
OP1: (90.234,119.581,5.478)
OP2: (89.592,117.662,3.901)
C2: (89.347,120.906,-1.659)
C1': (88.969,122.281,0.339)
C3': (87.238,121.572,1.772)
O5': (88.878,120.022,3.429)
O4': (89.445,122.339,1.674)
C5': (88.756,121.408,3.796)
P: (89.974,119.083,4.105)
C4': (88.333,122.218,2.597)
C2': (87.441,122.192,0.398)
O2': (86.863,123.477,0.277)
N1: (89.598,121.122,-0.308)
O4: (91.269,117.963,-2.146)
O2: (88.628,121.634,-2.334)
C6: (90.415,120.276,0.406)
C5: (91.008,119.214,-0.144)
O3': (85.955,121.828,2.309)
OP1: (93.916,118.261,-10.395)
OP2: (95.755,119.027,-8.764)
C3': (92.324,122.608,-8.505)
C1': (92.166,121.972,-6.253)
C5': (92.083,120.172,-9.105)
O4': (91.360,121.062,-6.976)
C8: (93.518,120.115,-5.120)
O2': (93.731,123.748,-6.840)
C6: (93.545,120.975,-1.715)
C5: (93.437,120.756,-3.095)
C4: (92.700,121.678,-3.816)
P: (94.319,118.777,-9.058)
C4': (91.468,121.351,-8.400)
C2': (93.186,122.512,-7.255)
C2: (92.235,122.855,-2.024)
N1: (92.919,122.054,-1.201)
N3: (92.063,122.760,-3.335)
N6: (94.233,120.184,-0.894)
N7: (93.945,119.768,-3.931)
N9: (92.768,121.269,-5.124)
O5': (93.482,120.098,-8.776)
O3': (91.485,123.741,-8.413)
OP2: (95.755,119.027,-8.764)
C3': (92.324,122.608,-8.505)
C1': (92.166,121.972,-6.253)
C5': (92.083,120.172,-9.105)
O4': (91.360,121.062,-6.976)
C8: (93.518,120.115,-5.120)
O2': (93.731,123.748,-6.840)
C6: (93.545,120.975,-1.715)
C5: (93.437,120.756,-3.095)
C4: (92.700,121.678,-3.816)
P: (94.319,118.777,-9.058)
C4': (91.468,121.351,-8.400)
C2': (93.186,122.512,-7.255)
C2: (92.235,122.855,-2.024)
N1: (92.919,122.054,-1.201)
N3: (92.063,122.760,-3.335)
N6: (94.233,120.184,-0.894)
N7: (93.945,119.768,-3.931)
N9: (92.768,121.269,-5.124)
O5': (93.482,120.098,-8.776)
O3': (91.485,123.741,-8.413)
Image (generated by PyMOL):