Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2378:A1318
Extra
PDB:
ATOM 1 O3' C A2377 60.562 118.441 90.331 1.00 36.18 O
ATOM 2 P G A2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 3 OP1 G A2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 4 OP2 G A2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 5 O5' G A2378 59.098 120.316 89.571 1.00 36.19 O
ATOM 6 C5' G A2378 59.383 121.434 88.724 1.00 38.70 C
ATOM 7 C4' G A2378 58.094 122.049 88.251 1.00 41.31 C
ATOM 8 O4' G A2378 57.509 121.252 87.212 1.00 42.08 O
ATOM 9 C3' G A2378 56.985 122.074 89.288 1.00 43.42 C
ATOM 10 O3' G A2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 11 C2' G A2378 55.724 122.241 88.440 1.00 42.90 C
ATOM 12 O2' G A2378 55.396 123.583 88.155 1.00 44.78 O
ATOM 13 C1' G A2378 56.141 121.591 87.122 1.00 42.69 C
ATOM 14 N9 G A2378 55.365 120.420 86.735 1.00 41.39 N
ATOM 15 C8 G A2378 55.357 119.175 87.317 1.00 40.91 C
ATOM 16 N7 G A2378 54.603 118.319 86.683 1.00 41.02 N
ATOM 17 C5 G A2378 54.073 119.050 85.625 1.00 40.23 C
ATOM 18 C6 G A2378 53.214 118.663 84.563 1.00 38.80 C
ATOM 19 O6 G A2378 52.736 117.554 84.326 1.00 38.00 O
ATOM 20 N1 G A2378 52.934 119.736 83.711 1.00 37.58 N
ATOM 21 C2 G A2378 53.420 121.012 83.848 1.00 36.99 C
ATOM 22 N2 G A2378 53.065 121.898 82.912 1.00 32.00 N
ATOM 23 N3 G A2378 54.212 121.385 84.827 1.00 39.32 N
ATOM 24 C4 G A2378 54.508 120.358 85.668 1.00 40.64 C
ATOM 25 P A A2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 26 OP1 A A2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 27 OP2 A A2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 28 O5' A A2379 57.701 122.004 92.331 1.00 48.01 O
TER
ATOM 1 O3' A B1317 49.904 121.217 79.228 1.00 30.48 O
ATOM 2 P U B1318 51.125 122.221 79.127 1.00 31.27 P
ATOM 3 OP1 U B1318 51.417 122.275 77.689 1.00 30.42 O
ATOM 4 OP2 U B1318 52.157 121.726 80.082 1.00 31.24 O
ATOM 5 O5' U B1318 50.540 123.628 79.585 1.00 29.79 O
ATOM 6 C5' U B1318 49.957 123.827 80.881 1.00 30.81 C
ATOM 7 C4' U B1318 50.606 124.997 81.564 1.00 31.85 C
ATOM 8 O4' U B1318 51.969 124.637 81.818 1.00 32.73 O
ATOM 9 C3' U B1318 50.771 126.302 80.792 1.00 32.05 C
ATOM 10 O3' U B1318 49.585 127.104 80.830 1.00 31.52 O
ATOM 11 C2' U B1318 51.876 126.998 81.591 1.00 32.38 C
ATOM 12 O2' U B1318 51.387 127.630 82.757 1.00 34.79 O
ATOM 13 C1' U B1318 52.685 125.812 82.114 1.00 30.96 C
ATOM 14 N1 U B1318 54.081 125.656 81.690 1.00 29.49 N
ATOM 15 C2 U B1318 55.001 126.552 82.167 1.00 28.63 C
ATOM 16 O2 U B1318 54.712 127.515 82.880 1.00 30.43 O
ATOM 17 N3 U B1318 56.285 126.295 81.783 1.00 26.13 N
ATOM 18 C4 U B1318 56.732 125.272 80.987 1.00 27.54 C
ATOM 19 O4 U B1318 57.927 125.212 80.690 1.00 28.24 O
ATOM 20 C5 U B1318 55.714 124.405 80.516 1.00 27.79 C
ATOM 21 C6 U B1318 54.456 124.626 80.869 1.00 28.48 C
ATOM 22 P C B1319 49.187 128.008 79.566 1.00 29.90 P
ATOM 23 OP1 C B1319 50.036 129.230 79.532 1.00 31.98 O
ATOM 24 OP2 C B1319 47.726 128.155 79.606 1.00 31.11 O
ATOM 25 O5' C B1319 49.509 127.064 78.332 1.00 30.85 O
TER
ATOM 2 P G A2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 3 OP1 G A2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 4 OP2 G A2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 5 O5' G A2378 59.098 120.316 89.571 1.00 36.19 O
ATOM 6 C5' G A2378 59.383 121.434 88.724 1.00 38.70 C
ATOM 7 C4' G A2378 58.094 122.049 88.251 1.00 41.31 C
ATOM 8 O4' G A2378 57.509 121.252 87.212 1.00 42.08 O
ATOM 9 C3' G A2378 56.985 122.074 89.288 1.00 43.42 C
ATOM 10 O3' G A2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 11 C2' G A2378 55.724 122.241 88.440 1.00 42.90 C
ATOM 12 O2' G A2378 55.396 123.583 88.155 1.00 44.78 O
ATOM 13 C1' G A2378 56.141 121.591 87.122 1.00 42.69 C
ATOM 14 N9 G A2378 55.365 120.420 86.735 1.00 41.39 N
ATOM 15 C8 G A2378 55.357 119.175 87.317 1.00 40.91 C
ATOM 16 N7 G A2378 54.603 118.319 86.683 1.00 41.02 N
ATOM 17 C5 G A2378 54.073 119.050 85.625 1.00 40.23 C
ATOM 18 C6 G A2378 53.214 118.663 84.563 1.00 38.80 C
ATOM 19 O6 G A2378 52.736 117.554 84.326 1.00 38.00 O
ATOM 20 N1 G A2378 52.934 119.736 83.711 1.00 37.58 N
ATOM 21 C2 G A2378 53.420 121.012 83.848 1.00 36.99 C
ATOM 22 N2 G A2378 53.065 121.898 82.912 1.00 32.00 N
ATOM 23 N3 G A2378 54.212 121.385 84.827 1.00 39.32 N
ATOM 24 C4 G A2378 54.508 120.358 85.668 1.00 40.64 C
ATOM 25 P A A2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 26 OP1 A A2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 27 OP2 A A2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 28 O5' A A2379 57.701 122.004 92.331 1.00 48.01 O
TER
ATOM 1 O3' A B1317 49.904 121.217 79.228 1.00 30.48 O
ATOM 2 P U B1318 51.125 122.221 79.127 1.00 31.27 P
ATOM 3 OP1 U B1318 51.417 122.275 77.689 1.00 30.42 O
ATOM 4 OP2 U B1318 52.157 121.726 80.082 1.00 31.24 O
ATOM 5 O5' U B1318 50.540 123.628 79.585 1.00 29.79 O
ATOM 6 C5' U B1318 49.957 123.827 80.881 1.00 30.81 C
ATOM 7 C4' U B1318 50.606 124.997 81.564 1.00 31.85 C
ATOM 8 O4' U B1318 51.969 124.637 81.818 1.00 32.73 O
ATOM 9 C3' U B1318 50.771 126.302 80.792 1.00 32.05 C
ATOM 10 O3' U B1318 49.585 127.104 80.830 1.00 31.52 O
ATOM 11 C2' U B1318 51.876 126.998 81.591 1.00 32.38 C
ATOM 12 O2' U B1318 51.387 127.630 82.757 1.00 34.79 O
ATOM 13 C1' U B1318 52.685 125.812 82.114 1.00 30.96 C
ATOM 14 N1 U B1318 54.081 125.656 81.690 1.00 29.49 N
ATOM 15 C2 U B1318 55.001 126.552 82.167 1.00 28.63 C
ATOM 16 O2 U B1318 54.712 127.515 82.880 1.00 30.43 O
ATOM 17 N3 U B1318 56.285 126.295 81.783 1.00 26.13 N
ATOM 18 C4 U B1318 56.732 125.272 80.987 1.00 27.54 C
ATOM 19 O4 U B1318 57.927 125.212 80.690 1.00 28.24 O
ATOM 20 C5 U B1318 55.714 124.405 80.516 1.00 27.79 C
ATOM 21 C6 U B1318 54.456 124.626 80.869 1.00 28.48 C
ATOM 22 P C B1319 49.187 128.008 79.566 1.00 29.90 P
ATOM 23 OP1 C B1319 50.036 129.230 79.532 1.00 31.98 O
ATOM 24 OP2 C B1319 47.726 128.155 79.606 1.00 31.11 O
ATOM 25 O5' C B1319 49.509 127.064 78.332 1.00 30.85 O
TER
Atoms:
OP1: (58.364,117.966,89.235)
OP2: (60.268,118.991,87.884)
C3': (56.985,122.074,89.288)
C1': (56.141,121.591,87.122)
C5': (59.383,121.434,88.724)
O6: (52.736,117.554,84.326)
O4': (57.509,121.252,87.212)
C8: (55.357,119.175,87.317)
C2: (53.420,121.012,83.848)
C6: (53.214,118.663,84.563)
C5: (54.073,119.050,85.625)
C4: (54.508,120.358,85.668)
P: (59.541,118.851,89.160)
C4': (58.094,122.049,88.251)
C2': (55.724,122.241,88.440)
O2': (55.396,123.583,88.155)
N1: (52.934,119.736,83.711)
N2: (53.065,121.898,82.912)
N3: (54.212,121.385,84.827)
N7: (54.603,118.319,86.683)
N9: (55.365,120.420,86.735)
O5': (59.098,120.316,89.571)
O3': (57.174,123.203,90.129)
OP2: (60.268,118.991,87.884)
C3': (56.985,122.074,89.288)
C1': (56.141,121.591,87.122)
C5': (59.383,121.434,88.724)
O6: (52.736,117.554,84.326)
O4': (57.509,121.252,87.212)
C8: (55.357,119.175,87.317)
C2: (53.420,121.012,83.848)
C6: (53.214,118.663,84.563)
C5: (54.073,119.050,85.625)
C4: (54.508,120.358,85.668)
P: (59.541,118.851,89.160)
C4': (58.094,122.049,88.251)
C2': (55.724,122.241,88.440)
O2': (55.396,123.583,88.155)
N1: (52.934,119.736,83.711)
N2: (53.065,121.898,82.912)
N3: (54.212,121.385,84.827)
N7: (54.603,118.319,86.683)
N9: (55.365,120.420,86.735)
O5': (59.098,120.316,89.571)
O3': (57.174,123.203,90.129)
C4: (56.732,125.272,80.987)
N3: (56.285,126.295,81.783)
OP1: (51.417,122.275,77.689)
OP2: (52.157,121.726,80.082)
C2: (55.001,126.552,82.167)
C1': (52.685,125.812,82.114)
C3': (50.771,126.302,80.792)
O5': (50.540,123.628,79.585)
O4': (51.969,124.637,81.818)
C5': (49.957,123.827,80.881)
P: (51.125,122.221,79.127)
C4': (50.606,124.997,81.564)
C2': (51.876,126.998,81.591)
O2': (51.387,127.630,82.757)
N1: (54.081,125.656,81.690)
O4: (57.927,125.212,80.690)
O2: (54.712,127.515,82.880)
C6: (54.456,124.626,80.869)
C5: (55.714,124.405,80.516)
O3': (49.585,127.104,80.830)
N3: (56.285,126.295,81.783)
OP1: (51.417,122.275,77.689)
OP2: (52.157,121.726,80.082)
C2: (55.001,126.552,82.167)
C1': (52.685,125.812,82.114)
C3': (50.771,126.302,80.792)
O5': (50.540,123.628,79.585)
O4': (51.969,124.637,81.818)
C5': (49.957,123.827,80.881)
P: (51.125,122.221,79.127)
C4': (50.606,124.997,81.564)
C2': (51.876,126.998,81.591)
O2': (51.387,127.630,82.757)
N1: (54.081,125.656,81.690)
O4: (57.927,125.212,80.690)
O2: (54.712,127.515,82.880)
C6: (54.456,124.626,80.869)
C5: (55.714,124.405,80.516)
O3': (49.585,127.104,80.830)
Image (generated by PyMOL):