Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 91.035 118.957 3.069 1.00 47.93 O
ATOM 2 P U A 253 89.683 118.713 3.894 1.00 49.49 P
ATOM 3 OP1 U A 253 89.913 119.192 5.286 1.00 49.36 O
ATOM 4 OP2 U A 253 89.258 117.315 3.669 1.00 49.27 O
ATOM 5 O5' U A 253 88.626 119.675 3.190 1.00 48.50 O
ATOM 6 C5' U A 253 88.474 121.050 3.604 1.00 48.79 C
ATOM 7 C4' U A 253 88.070 121.899 2.425 1.00 49.91 C
ATOM 8 O4' U A 253 89.194 122.035 1.515 1.00 50.28 O
ATOM 9 C3' U A 253 86.975 121.281 1.578 1.00 49.64 C
ATOM 10 O3' U A 253 85.690 121.560 2.109 1.00 50.01 O
ATOM 11 C2' U A 253 87.207 121.914 0.212 1.00 47.85 C
ATOM 12 O2' U A 253 86.662 123.211 0.120 1.00 46.15 O
ATOM 13 C1' U A 253 88.736 121.976 0.171 1.00 47.19 C
ATOM 14 N1 U A 253 89.373 120.818 -0.482 1.00 46.23 N
ATOM 15 C2 U A 253 89.226 120.677 -1.856 1.00 45.26 C
ATOM 16 O2 U A 253 88.606 121.470 -2.542 1.00 46.72 O
ATOM 17 N3 U A 253 89.833 119.573 -2.393 1.00 42.76 N
ATOM 18 C4 U A 253 90.559 118.617 -1.718 1.00 46.11 C
ATOM 19 O4 U A 253 91.041 117.670 -2.342 1.00 45.68 O
ATOM 20 C5 U A 253 90.679 118.839 -0.307 1.00 45.73 C
ATOM 21 C6 U A 253 90.096 119.900 0.246 1.00 44.43 C
ATOM 22 P G A 254 84.569 120.419 2.094 1.00 50.47 P
ATOM 23 OP1 G A 254 83.302 121.072 2.524 1.00 50.11 O
ATOM 24 OP2 G A 254 85.086 119.237 2.834 1.00 49.59 O
ATOM 25 O5' G A 254 84.459 119.987 0.560 1.00 53.96 O
TER
ATOM 1 O3' G B 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 2 P A B 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 3 OP1 A B 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 4 OP2 A B 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 5 O5' A B 235 93.237 119.654 -9.075 1.00 61.34 O
ATOM 6 C5' A B 235 91.837 119.775 -9.407 1.00 58.83 C
ATOM 7 C4' A B 235 91.229 120.931 -8.651 1.00 59.33 C
ATOM 8 O4' A B 235 91.128 120.588 -7.236 1.00 57.96 O
ATOM 9 C3' A B 235 92.044 122.221 -8.710 1.00 58.21 C
ATOM 10 O3' A B 235 91.172 123.343 -8.611 1.00 60.39 O
ATOM 11 C2' A B 235 92.875 122.120 -7.437 1.00 57.42 C
ATOM 12 O2' A B 235 93.393 123.346 -6.965 1.00 57.54 O
ATOM 13 C1' A B 235 91.843 121.538 -6.475 1.00 56.90 C
ATOM 14 N9 A B 235 92.417 120.882 -5.303 1.00 54.80 N
ATOM 15 C8 A B 235 93.109 119.700 -5.238 1.00 54.56 C
ATOM 16 N7 A B 235 93.540 119.407 -4.038 1.00 52.41 N
ATOM 17 C5 A B 235 93.091 120.462 -3.255 1.00 52.46 C
ATOM 18 C6 A B 235 93.229 120.751 -1.886 1.00 50.13 C
ATOM 19 N6 A B 235 93.895 119.973 -1.031 1.00 48.26 N
ATOM 20 N1 A B 235 92.658 121.882 -1.424 1.00 48.90 N
ATOM 21 C2 A B 235 92.000 122.664 -2.283 1.00 50.85 C
ATOM 22 N3 A B 235 91.807 122.505 -3.588 1.00 53.51 N
ATOM 23 C4 A B 235 92.387 121.370 -4.019 1.00 53.01 C
ATOM 24 P A B 236 90.672 124.090 -9.943 1.00 61.16 P
ATOM 25 OP1 A B 236 91.747 123.964 -10.963 1.00 62.41 O
ATOM 26 OP2 A B 236 90.189 125.442 -9.550 1.00 61.21 O
ATOM 27 O5' A B 236 89.412 123.233 -10.412 1.00 58.80 O
TER
ATOM 2 P U A 253 89.683 118.713 3.894 1.00 49.49 P
ATOM 3 OP1 U A 253 89.913 119.192 5.286 1.00 49.36 O
ATOM 4 OP2 U A 253 89.258 117.315 3.669 1.00 49.27 O
ATOM 5 O5' U A 253 88.626 119.675 3.190 1.00 48.50 O
ATOM 6 C5' U A 253 88.474 121.050 3.604 1.00 48.79 C
ATOM 7 C4' U A 253 88.070 121.899 2.425 1.00 49.91 C
ATOM 8 O4' U A 253 89.194 122.035 1.515 1.00 50.28 O
ATOM 9 C3' U A 253 86.975 121.281 1.578 1.00 49.64 C
ATOM 10 O3' U A 253 85.690 121.560 2.109 1.00 50.01 O
ATOM 11 C2' U A 253 87.207 121.914 0.212 1.00 47.85 C
ATOM 12 O2' U A 253 86.662 123.211 0.120 1.00 46.15 O
ATOM 13 C1' U A 253 88.736 121.976 0.171 1.00 47.19 C
ATOM 14 N1 U A 253 89.373 120.818 -0.482 1.00 46.23 N
ATOM 15 C2 U A 253 89.226 120.677 -1.856 1.00 45.26 C
ATOM 16 O2 U A 253 88.606 121.470 -2.542 1.00 46.72 O
ATOM 17 N3 U A 253 89.833 119.573 -2.393 1.00 42.76 N
ATOM 18 C4 U A 253 90.559 118.617 -1.718 1.00 46.11 C
ATOM 19 O4 U A 253 91.041 117.670 -2.342 1.00 45.68 O
ATOM 20 C5 U A 253 90.679 118.839 -0.307 1.00 45.73 C
ATOM 21 C6 U A 253 90.096 119.900 0.246 1.00 44.43 C
ATOM 22 P G A 254 84.569 120.419 2.094 1.00 50.47 P
ATOM 23 OP1 G A 254 83.302 121.072 2.524 1.00 50.11 O
ATOM 24 OP2 G A 254 85.086 119.237 2.834 1.00 49.59 O
ATOM 25 O5' G A 254 84.459 119.987 0.560 1.00 53.96 O
TER
ATOM 1 O3' G B 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 2 P A B 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 3 OP1 A B 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 4 OP2 A B 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 5 O5' A B 235 93.237 119.654 -9.075 1.00 61.34 O
ATOM 6 C5' A B 235 91.837 119.775 -9.407 1.00 58.83 C
ATOM 7 C4' A B 235 91.229 120.931 -8.651 1.00 59.33 C
ATOM 8 O4' A B 235 91.128 120.588 -7.236 1.00 57.96 O
ATOM 9 C3' A B 235 92.044 122.221 -8.710 1.00 58.21 C
ATOM 10 O3' A B 235 91.172 123.343 -8.611 1.00 60.39 O
ATOM 11 C2' A B 235 92.875 122.120 -7.437 1.00 57.42 C
ATOM 12 O2' A B 235 93.393 123.346 -6.965 1.00 57.54 O
ATOM 13 C1' A B 235 91.843 121.538 -6.475 1.00 56.90 C
ATOM 14 N9 A B 235 92.417 120.882 -5.303 1.00 54.80 N
ATOM 15 C8 A B 235 93.109 119.700 -5.238 1.00 54.56 C
ATOM 16 N7 A B 235 93.540 119.407 -4.038 1.00 52.41 N
ATOM 17 C5 A B 235 93.091 120.462 -3.255 1.00 52.46 C
ATOM 18 C6 A B 235 93.229 120.751 -1.886 1.00 50.13 C
ATOM 19 N6 A B 235 93.895 119.973 -1.031 1.00 48.26 N
ATOM 20 N1 A B 235 92.658 121.882 -1.424 1.00 48.90 N
ATOM 21 C2 A B 235 92.000 122.664 -2.283 1.00 50.85 C
ATOM 22 N3 A B 235 91.807 122.505 -3.588 1.00 53.51 N
ATOM 23 C4 A B 235 92.387 121.370 -4.019 1.00 53.01 C
ATOM 24 P A B 236 90.672 124.090 -9.943 1.00 61.16 P
ATOM 25 OP1 A B 236 91.747 123.964 -10.963 1.00 62.41 O
ATOM 26 OP2 A B 236 90.189 125.442 -9.550 1.00 61.21 O
ATOM 27 O5' A B 236 89.412 123.233 -10.412 1.00 58.80 O
TER
Atoms:
C4: (90.559,118.617,-1.718)
N3: (89.833,119.573,-2.393)
OP1: (89.913,119.192,5.286)
OP2: (89.258,117.315,3.669)
C2: (89.226,120.677,-1.856)
C1': (88.736,121.976,0.171)
C3': (86.975,121.281,1.578)
O5': (88.626,119.675,3.190)
O4': (89.194,122.035,1.515)
C5': (88.474,121.050,3.604)
P: (89.683,118.713,3.894)
C4': (88.070,121.899,2.425)
C2': (87.207,121.914,0.212)
O2': (86.662,123.211,0.120)
N1: (89.373,120.818,-0.482)
O4: (91.041,117.670,-2.342)
O2: (88.606,121.470,-2.542)
C6: (90.096,119.900,0.246)
C5: (90.679,118.839,-0.307)
O3': (85.690,121.560,2.109)
N3: (89.833,119.573,-2.393)
OP1: (89.913,119.192,5.286)
OP2: (89.258,117.315,3.669)
C2: (89.226,120.677,-1.856)
C1': (88.736,121.976,0.171)
C3': (86.975,121.281,1.578)
O5': (88.626,119.675,3.190)
O4': (89.194,122.035,1.515)
C5': (88.474,121.050,3.604)
P: (89.683,118.713,3.894)
C4': (88.070,121.899,2.425)
C2': (87.207,121.914,0.212)
O2': (86.662,123.211,0.120)
N1: (89.373,120.818,-0.482)
O4: (91.041,117.670,-2.342)
O2: (88.606,121.470,-2.542)
C6: (90.096,119.900,0.246)
C5: (90.679,118.839,-0.307)
O3': (85.690,121.560,2.109)
OP1: (93.522,117.733,-10.628)
OP2: (95.492,118.521,-9.178)
C3': (92.044,122.221,-8.710)
C1': (91.843,121.538,-6.475)
C5': (91.837,119.775,-9.407)
O4': (91.128,120.588,-7.236)
C8: (93.109,119.700,-5.238)
O2': (93.393,123.346,-6.965)
C6: (93.229,120.751,-1.886)
C5: (93.091,120.462,-3.255)
C4: (92.387,121.370,-4.019)
P: (94.030,118.302,-9.353)
C4': (91.229,120.931,-8.651)
C2': (92.875,122.120,-7.437)
C2: (92.000,122.664,-2.283)
N1: (92.658,121.882,-1.424)
N3: (91.807,122.505,-3.588)
N6: (93.895,119.973,-1.031)
N7: (93.540,119.407,-4.038)
N9: (92.417,120.882,-5.303)
O5': (93.237,119.654,-9.075)
O3': (91.172,123.343,-8.611)
OP2: (95.492,118.521,-9.178)
C3': (92.044,122.221,-8.710)
C1': (91.843,121.538,-6.475)
C5': (91.837,119.775,-9.407)
O4': (91.128,120.588,-7.236)
C8: (93.109,119.700,-5.238)
O2': (93.393,123.346,-6.965)
C6: (93.229,120.751,-1.886)
C5: (93.091,120.462,-3.255)
C4: (92.387,121.370,-4.019)
P: (94.030,118.302,-9.353)
C4': (91.229,120.931,-8.651)
C2': (92.875,122.120,-7.437)
C2: (92.000,122.664,-2.283)
N1: (92.658,121.882,-1.424)
N3: (91.807,122.505,-3.588)
N6: (93.895,119.973,-1.031)
N7: (93.540,119.407,-4.038)
N9: (92.417,120.882,-5.303)
O5': (93.237,119.654,-9.075)
O3': (91.172,123.343,-8.611)
Image (generated by PyMOL):