Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A32:A35
Extra
PDB:
ATOM 1 P U A 32 -7.321 21.045 -30.154 1.00 1.00 P
ATOM 2 OP1 U A 32 -7.972 22.398 -30.289 1.00 1.00 O
ATOM 3 OP2 U A 32 -8.292 20.012 -29.706 1.00 1.00 O
ATOM 4 O5' U A 32 -6.561 20.705 -31.530 1.00 1.00 O
ATOM 5 C5' U A 32 -5.126 20.950 -31.500 1.00 1.00 C
ATOM 6 C4' U A 32 -4.481 19.842 -32.307 1.00 1.00 C
ATOM 7 O4' U A 32 -3.992 18.822 -31.440 1.00 1.00 O
ATOM 8 C3' U A 32 -5.433 19.087 -33.249 1.00 1.00 C
ATOM 9 O3' U A 32 -5.705 19.821 -34.415 1.00 1.00 O
ATOM 10 C2' U A 32 -4.637 17.795 -33.488 1.00 1.00 C
ATOM 11 O2' U A 32 -3.637 18.087 -34.445 1.00 1.00 O
ATOM 12 C1' U A 32 -4.053 17.557 -32.098 1.00 1.00 C
ATOM 13 N1 U A 32 -4.879 16.591 -31.350 1.00 0.83 N
ATOM 14 C2 U A 32 -4.734 15.258 -31.709 1.00 0.83 C
ATOM 15 O2 U A 32 -3.962 14.918 -32.606 1.00 0.83 O
ATOM 16 N3 U A 32 -5.488 14.340 -31.036 1.00 0.83 N
ATOM 17 C4 U A 32 -6.350 14.694 -30.035 1.00 0.83 C
ATOM 18 O4 U A 32 -6.989 13.756 -29.481 1.00 0.83 O
ATOM 19 C5 U A 32 -6.477 16.068 -29.691 1.00 0.83 C
ATOM 20 C6 U A 32 -5.735 16.958 -30.363 1.00 0.83 C
ATOM 21 P G A 33 -6.971 19.746 -35.387 1.00 1.00 P
ATOM 22 OP1 G A 33 -6.549 20.222 -36.762 1.00 1.00 O
ATOM 23 OP2 G A 33 -7.960 20.685 -34.789 1.00 1.00 O
ATOM 24 O5' G A 33 -7.429 18.223 -35.417 1.00 1.00 O
TER
ATOM 1 O3' U B 34 -5.753 10.648 -32.337 1.00 1.00 O
ATOM 2 P C B 35 -4.734 10.002 -31.290 1.00 1.00 P
ATOM 3 OP1 C B 35 -5.397 8.812 -30.647 1.00 1.00 O
ATOM 4 OP2 C B 35 -4.414 11.124 -30.363 1.00 1.00 O
ATOM 5 O5' C B 35 -3.474 9.458 -32.098 1.00 1.00 O
ATOM 6 C5' C B 35 -3.070 8.057 -31.888 1.00 1.00 C
ATOM 7 C4' C B 35 -1.562 8.105 -32.023 1.00 1.00 C
ATOM 8 O4' C B 35 -1.219 8.792 -33.219 1.00 1.00 O
ATOM 9 C3' C B 35 -0.839 8.914 -30.947 1.00 1.00 C
ATOM 10 O3' C B 35 -0.640 8.261 -29.691 1.00 1.00 O
ATOM 11 C2' C B 35 0.506 9.213 -31.649 1.00 1.00 C
ATOM 12 O2' C B 35 1.272 8.016 -31.559 1.00 1.00 O
ATOM 13 C1' C B 35 0.024 9.478 -33.040 1.00 1.00 C
ATOM 14 N1 C B 35 -0.200 10.920 -33.249 1.00 1.00 N
ATOM 15 C2 C B 35 0.880 11.682 -33.667 1.00 1.00 C
ATOM 16 O2 C B 35 1.977 11.165 -33.847 1.00 1.00 O
ATOM 17 N3 C B 35 0.675 13.021 -33.847 1.00 1.00 N
ATOM 18 C4 C B 35 -0.537 13.599 -33.638 1.00 1.00 C
ATOM 19 N4 C B 35 -0.658 14.912 -33.847 1.00 1.00 N
ATOM 20 C5 C B 35 -1.641 12.810 -33.219 1.00 1.00 C
ATOM 21 C6 C B 35 -1.424 11.498 -33.025 1.00 1.00 C
TER
ATOM 2 OP1 U A 32 -7.972 22.398 -30.289 1.00 1.00 O
ATOM 3 OP2 U A 32 -8.292 20.012 -29.706 1.00 1.00 O
ATOM 4 O5' U A 32 -6.561 20.705 -31.530 1.00 1.00 O
ATOM 5 C5' U A 32 -5.126 20.950 -31.500 1.00 1.00 C
ATOM 6 C4' U A 32 -4.481 19.842 -32.307 1.00 1.00 C
ATOM 7 O4' U A 32 -3.992 18.822 -31.440 1.00 1.00 O
ATOM 8 C3' U A 32 -5.433 19.087 -33.249 1.00 1.00 C
ATOM 9 O3' U A 32 -5.705 19.821 -34.415 1.00 1.00 O
ATOM 10 C2' U A 32 -4.637 17.795 -33.488 1.00 1.00 C
ATOM 11 O2' U A 32 -3.637 18.087 -34.445 1.00 1.00 O
ATOM 12 C1' U A 32 -4.053 17.557 -32.098 1.00 1.00 C
ATOM 13 N1 U A 32 -4.879 16.591 -31.350 1.00 0.83 N
ATOM 14 C2 U A 32 -4.734 15.258 -31.709 1.00 0.83 C
ATOM 15 O2 U A 32 -3.962 14.918 -32.606 1.00 0.83 O
ATOM 16 N3 U A 32 -5.488 14.340 -31.036 1.00 0.83 N
ATOM 17 C4 U A 32 -6.350 14.694 -30.035 1.00 0.83 C
ATOM 18 O4 U A 32 -6.989 13.756 -29.481 1.00 0.83 O
ATOM 19 C5 U A 32 -6.477 16.068 -29.691 1.00 0.83 C
ATOM 20 C6 U A 32 -5.735 16.958 -30.363 1.00 0.83 C
ATOM 21 P G A 33 -6.971 19.746 -35.387 1.00 1.00 P
ATOM 22 OP1 G A 33 -6.549 20.222 -36.762 1.00 1.00 O
ATOM 23 OP2 G A 33 -7.960 20.685 -34.789 1.00 1.00 O
ATOM 24 O5' G A 33 -7.429 18.223 -35.417 1.00 1.00 O
TER
ATOM 1 O3' U B 34 -5.753 10.648 -32.337 1.00 1.00 O
ATOM 2 P C B 35 -4.734 10.002 -31.290 1.00 1.00 P
ATOM 3 OP1 C B 35 -5.397 8.812 -30.647 1.00 1.00 O
ATOM 4 OP2 C B 35 -4.414 11.124 -30.363 1.00 1.00 O
ATOM 5 O5' C B 35 -3.474 9.458 -32.098 1.00 1.00 O
ATOM 6 C5' C B 35 -3.070 8.057 -31.888 1.00 1.00 C
ATOM 7 C4' C B 35 -1.562 8.105 -32.023 1.00 1.00 C
ATOM 8 O4' C B 35 -1.219 8.792 -33.219 1.00 1.00 O
ATOM 9 C3' C B 35 -0.839 8.914 -30.947 1.00 1.00 C
ATOM 10 O3' C B 35 -0.640 8.261 -29.691 1.00 1.00 O
ATOM 11 C2' C B 35 0.506 9.213 -31.649 1.00 1.00 C
ATOM 12 O2' C B 35 1.272 8.016 -31.559 1.00 1.00 O
ATOM 13 C1' C B 35 0.024 9.478 -33.040 1.00 1.00 C
ATOM 14 N1 C B 35 -0.200 10.920 -33.249 1.00 1.00 N
ATOM 15 C2 C B 35 0.880 11.682 -33.667 1.00 1.00 C
ATOM 16 O2 C B 35 1.977 11.165 -33.847 1.00 1.00 O
ATOM 17 N3 C B 35 0.675 13.021 -33.847 1.00 1.00 N
ATOM 18 C4 C B 35 -0.537 13.599 -33.638 1.00 1.00 C
ATOM 19 N4 C B 35 -0.658 14.912 -33.847 1.00 1.00 N
ATOM 20 C5 C B 35 -1.641 12.810 -33.219 1.00 1.00 C
ATOM 21 C6 C B 35 -1.424 11.498 -33.025 1.00 1.00 C
TER
Atoms:
C4: (-6.350,14.694,-30.035)
N3: (-5.488,14.340,-31.036)
OP1: (-7.972,22.398,-30.289)
OP2: (-8.292,20.012,-29.706)
C2: (-4.734,15.258,-31.709)
C1': (-4.053,17.557,-32.098)
C3': (-5.433,19.087,-33.249)
O5': (-6.561,20.705,-31.530)
O4': (-3.992,18.822,-31.440)
C5': (-5.126,20.950,-31.500)
P: (-7.321,21.045,-30.154)
C4': (-4.481,19.842,-32.307)
C2': (-4.637,17.795,-33.488)
O2': (-3.637,18.087,-34.445)
N1: (-4.879,16.591,-31.350)
O4: (-6.989,13.756,-29.481)
O2: (-3.962,14.918,-32.606)
C6: (-5.735,16.958,-30.363)
C5: (-6.477,16.068,-29.691)
O3': (-5.705,19.821,-34.415)
N3: (-5.488,14.340,-31.036)
OP1: (-7.972,22.398,-30.289)
OP2: (-8.292,20.012,-29.706)
C2: (-4.734,15.258,-31.709)
C1': (-4.053,17.557,-32.098)
C3': (-5.433,19.087,-33.249)
O5': (-6.561,20.705,-31.530)
O4': (-3.992,18.822,-31.440)
C5': (-5.126,20.950,-31.500)
P: (-7.321,21.045,-30.154)
C4': (-4.481,19.842,-32.307)
C2': (-4.637,17.795,-33.488)
O2': (-3.637,18.087,-34.445)
N1: (-4.879,16.591,-31.350)
O4: (-6.989,13.756,-29.481)
O2: (-3.962,14.918,-32.606)
C6: (-5.735,16.958,-30.363)
C5: (-6.477,16.068,-29.691)
O3': (-5.705,19.821,-34.415)
C2: (0.880,11.682,-33.667)
OP1: (-5.397,8.812,-30.647)
OP2: (-4.414,11.124,-30.363)
C4: (-0.537,13.599,-33.638)
O5': (-3.474,9.458,-32.098)
C3': (-0.839,8.914,-30.947)
C1': (0.024,9.478,-33.040)
O4': (-1.219,8.792,-33.219)
C5': (-3.070,8.057,-31.888)
P: (-4.734,10.002,-31.290)
O2: (1.977,11.165,-33.847)
C4': (-1.562,8.105,-32.023)
C2': (0.506,9.213,-31.649)
O2': (1.272,8.016,-31.559)
N1: (-0.200,10.920,-33.249)
N3: (0.675,13.021,-33.847)
N4: (-0.658,14.912,-33.847)
C6: (-1.424,11.498,-33.025)
C5: (-1.641,12.810,-33.219)
O3': (-0.640,8.261,-29.691)
OP1: (-5.397,8.812,-30.647)
OP2: (-4.414,11.124,-30.363)
C4: (-0.537,13.599,-33.638)
O5': (-3.474,9.458,-32.098)
C3': (-0.839,8.914,-30.947)
C1': (0.024,9.478,-33.040)
O4': (-1.219,8.792,-33.219)
C5': (-3.070,8.057,-31.888)
P: (-4.734,10.002,-31.290)
O2: (1.977,11.165,-33.847)
C4': (-1.562,8.105,-32.023)
C2': (0.506,9.213,-31.649)
O2': (1.272,8.016,-31.559)
N1: (-0.200,10.920,-33.249)
N3: (0.675,13.021,-33.847)
N4: (-0.658,14.912,-33.847)
C6: (-1.424,11.498,-33.025)
C5: (-1.641,12.810,-33.219)
O3': (-0.640,8.261,-29.691)
Image (generated by PyMOL):