Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02079:02105
Extra
PDB:
ATOM 1 O3' C A2078 109.472 110.298 31.750 1.00 46.50 O
ATOM 2 P U A2079 110.952 110.385 31.123 1.00 50.14 P
ATOM 3 OP1 U A2079 111.651 111.508 31.797 1.00 50.54 O
ATOM 4 OP2 U A2079 110.802 110.394 29.643 1.00 50.83 O
ATOM 5 O5' U A2079 111.680 109.029 31.526 1.00 47.97 O
ATOM 6 C5' U A2079 112.841 108.591 30.803 1.00 48.71 C
ATOM 7 C4' U A2079 113.502 107.440 31.516 1.00 50.35 C
ATOM 8 O4' U A2079 114.068 107.911 32.767 1.00 50.45 O
ATOM 9 C3' U A2079 112.597 106.263 31.875 1.00 51.95 C
ATOM 10 O3' U A2079 113.368 105.058 31.854 1.00 55.21 O
ATOM 11 C2' U A2079 112.230 106.578 33.324 1.00 51.80 C
ATOM 12 O2' U A2079 111.863 105.441 34.083 1.00 54.09 O
ATOM 13 C1' U A2079 113.554 107.140 33.830 1.00 49.81 C
ATOM 14 N1 U A2079 113.502 107.973 35.040 1.00 48.02 N
ATOM 15 C2 U A2079 114.014 107.430 36.204 1.00 47.80 C
ATOM 16 O2 U A2079 114.439 106.289 36.275 1.00 47.49 O
ATOM 17 N3 U A2079 114.004 108.269 37.287 1.00 48.04 N
ATOM 18 C4 U A2079 113.530 109.558 37.335 1.00 48.25 C
ATOM 19 O4 U A2079 113.647 110.202 38.377 1.00 51.17 O
ATOM 20 C5 U A2079 112.981 110.039 36.104 1.00 47.53 C
ATOM 21 C6 U A2079 112.987 109.250 35.025 1.00 48.30 C
ATOM 22 P G A2080 113.813 104.402 30.452 1.00 57.59 P
ATOM 23 OP1 G A2080 112.781 104.760 29.433 1.00 53.55 O
ATOM 24 OP2 G A2080 114.123 102.973 30.713 1.00 55.44 O
ATOM 25 O5' G A2080 115.192 105.139 30.115 1.00 58.12 O
TER
ATOM 1 O3' A B2104 116.861 107.505 38.992 1.00 56.77 O
ATOM 2 P C B2105 116.090 106.436 39.913 1.00 55.77 P
ATOM 3 OP1 C B2105 116.881 105.179 39.980 1.00 55.97 O
ATOM 4 OP2 C B2105 114.685 106.388 39.431 1.00 56.18 O
ATOM 5 O5' C B2105 116.084 107.144 41.344 1.00 54.90 O
ATOM 6 C5' C B2105 116.942 106.689 42.402 1.00 52.52 C
ATOM 7 C4' C B2105 117.457 107.858 43.212 1.00 50.98 C
ATOM 8 O4' C B2105 118.205 108.762 42.354 1.00 49.99 O
ATOM 9 C3' C B2105 116.432 108.780 43.854 1.00 51.49 C
ATOM 10 O3' C B2105 115.864 108.241 45.043 1.00 51.61 O
ATOM 11 C2' C B2105 117.282 110.008 44.153 1.00 50.67 C
ATOM 12 O2' C B2105 118.113 109.839 45.284 1.00 50.01 O
ATOM 13 C1' C B2105 118.156 110.073 42.900 1.00 48.39 C
ATOM 14 N1 C B2105 117.619 111.010 41.894 1.00 46.75 N
ATOM 15 C2 C B2105 117.763 112.388 42.123 1.00 46.58 C
ATOM 16 O2 C B2105 118.315 112.771 43.169 1.00 48.12 O
ATOM 17 N3 C B2105 117.294 113.266 41.207 1.00 44.40 N
ATOM 18 C4 C B2105 116.699 112.820 40.101 1.00 43.01 C
ATOM 19 N4 C B2105 116.270 113.727 39.222 1.00 41.26 N
ATOM 20 C5 C B2105 116.521 111.426 39.847 1.00 43.32 C
ATOM 21 C6 C B2105 116.994 110.564 40.761 1.00 45.46 C
ATOM 22 P A B2106 114.359 108.639 45.461 1.00 52.55 P
ATOM 23 OP1 A B2106 114.143 108.096 46.825 1.00 53.69 O
ATOM 24 OP2 A B2106 113.427 108.261 44.365 1.00 51.59 O
ATOM 25 O5' A B2106 114.380 110.229 45.559 1.00 50.09 O
TER
ATOM 2 P U A2079 110.952 110.385 31.123 1.00 50.14 P
ATOM 3 OP1 U A2079 111.651 111.508 31.797 1.00 50.54 O
ATOM 4 OP2 U A2079 110.802 110.394 29.643 1.00 50.83 O
ATOM 5 O5' U A2079 111.680 109.029 31.526 1.00 47.97 O
ATOM 6 C5' U A2079 112.841 108.591 30.803 1.00 48.71 C
ATOM 7 C4' U A2079 113.502 107.440 31.516 1.00 50.35 C
ATOM 8 O4' U A2079 114.068 107.911 32.767 1.00 50.45 O
ATOM 9 C3' U A2079 112.597 106.263 31.875 1.00 51.95 C
ATOM 10 O3' U A2079 113.368 105.058 31.854 1.00 55.21 O
ATOM 11 C2' U A2079 112.230 106.578 33.324 1.00 51.80 C
ATOM 12 O2' U A2079 111.863 105.441 34.083 1.00 54.09 O
ATOM 13 C1' U A2079 113.554 107.140 33.830 1.00 49.81 C
ATOM 14 N1 U A2079 113.502 107.973 35.040 1.00 48.02 N
ATOM 15 C2 U A2079 114.014 107.430 36.204 1.00 47.80 C
ATOM 16 O2 U A2079 114.439 106.289 36.275 1.00 47.49 O
ATOM 17 N3 U A2079 114.004 108.269 37.287 1.00 48.04 N
ATOM 18 C4 U A2079 113.530 109.558 37.335 1.00 48.25 C
ATOM 19 O4 U A2079 113.647 110.202 38.377 1.00 51.17 O
ATOM 20 C5 U A2079 112.981 110.039 36.104 1.00 47.53 C
ATOM 21 C6 U A2079 112.987 109.250 35.025 1.00 48.30 C
ATOM 22 P G A2080 113.813 104.402 30.452 1.00 57.59 P
ATOM 23 OP1 G A2080 112.781 104.760 29.433 1.00 53.55 O
ATOM 24 OP2 G A2080 114.123 102.973 30.713 1.00 55.44 O
ATOM 25 O5' G A2080 115.192 105.139 30.115 1.00 58.12 O
TER
ATOM 1 O3' A B2104 116.861 107.505 38.992 1.00 56.77 O
ATOM 2 P C B2105 116.090 106.436 39.913 1.00 55.77 P
ATOM 3 OP1 C B2105 116.881 105.179 39.980 1.00 55.97 O
ATOM 4 OP2 C B2105 114.685 106.388 39.431 1.00 56.18 O
ATOM 5 O5' C B2105 116.084 107.144 41.344 1.00 54.90 O
ATOM 6 C5' C B2105 116.942 106.689 42.402 1.00 52.52 C
ATOM 7 C4' C B2105 117.457 107.858 43.212 1.00 50.98 C
ATOM 8 O4' C B2105 118.205 108.762 42.354 1.00 49.99 O
ATOM 9 C3' C B2105 116.432 108.780 43.854 1.00 51.49 C
ATOM 10 O3' C B2105 115.864 108.241 45.043 1.00 51.61 O
ATOM 11 C2' C B2105 117.282 110.008 44.153 1.00 50.67 C
ATOM 12 O2' C B2105 118.113 109.839 45.284 1.00 50.01 O
ATOM 13 C1' C B2105 118.156 110.073 42.900 1.00 48.39 C
ATOM 14 N1 C B2105 117.619 111.010 41.894 1.00 46.75 N
ATOM 15 C2 C B2105 117.763 112.388 42.123 1.00 46.58 C
ATOM 16 O2 C B2105 118.315 112.771 43.169 1.00 48.12 O
ATOM 17 N3 C B2105 117.294 113.266 41.207 1.00 44.40 N
ATOM 18 C4 C B2105 116.699 112.820 40.101 1.00 43.01 C
ATOM 19 N4 C B2105 116.270 113.727 39.222 1.00 41.26 N
ATOM 20 C5 C B2105 116.521 111.426 39.847 1.00 43.32 C
ATOM 21 C6 C B2105 116.994 110.564 40.761 1.00 45.46 C
ATOM 22 P A B2106 114.359 108.639 45.461 1.00 52.55 P
ATOM 23 OP1 A B2106 114.143 108.096 46.825 1.00 53.69 O
ATOM 24 OP2 A B2106 113.427 108.261 44.365 1.00 51.59 O
ATOM 25 O5' A B2106 114.380 110.229 45.559 1.00 50.09 O
TER
Atoms:
C4: (113.530,109.558,37.335)
N3: (114.004,108.269,37.287)
OP1: (111.651,111.508,31.797)
OP2: (110.802,110.394,29.643)
C2: (114.014,107.430,36.204)
C1': (113.554,107.140,33.830)
C3': (112.597,106.263,31.875)
O5': (111.680,109.029,31.526)
O4': (114.068,107.911,32.767)
C5': (112.841,108.591,30.803)
P: (110.952,110.385,31.123)
C4': (113.502,107.440,31.516)
C2': (112.230,106.578,33.324)
O2': (111.863,105.441,34.083)
N1: (113.502,107.973,35.040)
O4: (113.647,110.202,38.377)
O2: (114.439,106.289,36.275)
C6: (112.987,109.250,35.025)
C5: (112.981,110.039,36.104)
O3': (113.368,105.058,31.854)
N3: (114.004,108.269,37.287)
OP1: (111.651,111.508,31.797)
OP2: (110.802,110.394,29.643)
C2: (114.014,107.430,36.204)
C1': (113.554,107.140,33.830)
C3': (112.597,106.263,31.875)
O5': (111.680,109.029,31.526)
O4': (114.068,107.911,32.767)
C5': (112.841,108.591,30.803)
P: (110.952,110.385,31.123)
C4': (113.502,107.440,31.516)
C2': (112.230,106.578,33.324)
O2': (111.863,105.441,34.083)
N1: (113.502,107.973,35.040)
O4: (113.647,110.202,38.377)
O2: (114.439,106.289,36.275)
C6: (112.987,109.250,35.025)
C5: (112.981,110.039,36.104)
O3': (113.368,105.058,31.854)
C2: (117.763,112.388,42.123)
OP1: (116.881,105.179,39.980)
OP2: (114.685,106.388,39.431)
C4: (116.699,112.820,40.101)
O5': (116.084,107.144,41.344)
C3': (116.432,108.780,43.854)
C1': (118.156,110.073,42.900)
O4': (118.205,108.762,42.354)
C5': (116.942,106.689,42.402)
P: (116.090,106.436,39.913)
O2: (118.315,112.771,43.169)
C4': (117.457,107.858,43.212)
C2': (117.282,110.008,44.153)
O2': (118.113,109.839,45.284)
N1: (117.619,111.010,41.894)
N3: (117.294,113.266,41.207)
N4: (116.270,113.727,39.222)
C6: (116.994,110.564,40.761)
C5: (116.521,111.426,39.847)
O3': (115.864,108.241,45.043)
OP1: (116.881,105.179,39.980)
OP2: (114.685,106.388,39.431)
C4: (116.699,112.820,40.101)
O5': (116.084,107.144,41.344)
C3': (116.432,108.780,43.854)
C1': (118.156,110.073,42.900)
O4': (118.205,108.762,42.354)
C5': (116.942,106.689,42.402)
P: (116.090,106.436,39.913)
O2: (118.315,112.771,43.169)
C4': (117.457,107.858,43.212)
C2': (117.282,110.008,44.153)
O2': (118.113,109.839,45.284)
N1: (117.619,111.010,41.894)
N3: (117.294,113.266,41.207)
N4: (116.270,113.727,39.222)
C6: (116.994,110.564,40.761)
C5: (116.521,111.426,39.847)
O3': (115.864,108.241,45.043)
Image (generated by PyMOL):