Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02378:01318
Extra
PDB:
ATOM 1 O3' C A2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 2 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 3 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 4 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 5 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
ATOM 6 C5' G A2378 59.393 121.392 88.221 1.00 38.68 C
ATOM 7 C4' G A2378 58.139 121.991 87.643 1.00 41.84 C
ATOM 8 O4' G A2378 57.553 121.062 86.713 1.00 43.10 O
ATOM 9 C3' G A2378 57.006 122.193 88.639 1.00 43.43 C
ATOM 10 O3' G A2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 11 C2' G A2378 55.762 122.248 87.741 1.00 42.00 C
ATOM 12 O2' G A2378 55.440 123.552 87.306 1.00 40.15 O
ATOM 13 C1' G A2378 56.215 121.442 86.514 1.00 43.17 C
ATOM 14 N9 G A2378 55.439 120.283 86.082 1.00 42.93 N
ATOM 15 C8 G A2378 55.434 119.019 86.622 1.00 42.14 C
ATOM 16 N7 G A2378 54.653 118.192 85.978 1.00 41.44 N
ATOM 17 C5 G A2378 54.104 118.958 84.957 1.00 42.14 C
ATOM 18 C6 G A2378 53.180 118.608 83.932 1.00 41.82 C
ATOM 19 O6 G A2378 52.636 117.518 83.726 1.00 41.75 O
ATOM 20 N1 G A2378 52.899 119.691 83.103 1.00 41.38 N
ATOM 21 C2 G A2378 53.428 120.951 83.241 1.00 42.24 C
ATOM 22 N2 G A2378 53.036 121.865 82.341 1.00 38.70 N
ATOM 23 N3 G A2378 54.282 121.292 84.194 1.00 43.21 N
ATOM 24 C4 G A2378 54.575 120.252 85.010 1.00 42.55 C
ATOM 25 P A A2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 26 OP1 A A2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 27 OP2 A A2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 28 O5' A A2379 57.438 122.465 91.707 1.00 46.93 O
TER
ATOM 1 O3' A B1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 2 P U B1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 3 OP1 U B1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 4 OP2 U B1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 5 O5' U B1318 50.219 123.754 79.245 1.00 25.49 O
ATOM 6 C5' U B1318 49.748 123.886 80.594 1.00 28.51 C
ATOM 7 C4' U B1318 50.440 125.046 81.272 1.00 29.46 C
ATOM 8 O4' U B1318 51.787 124.672 81.621 1.00 30.26 O
ATOM 9 C3' U B1318 50.650 126.277 80.409 1.00 29.45 C
ATOM 10 O3' U B1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 11 C2' U B1318 51.789 127.005 81.128 1.00 32.77 C
ATOM 12 O2' U B1318 51.358 127.903 82.134 1.00 35.33 O
ATOM 13 C1' U B1318 52.550 125.845 81.785 1.00 29.46 C
ATOM 14 N1 U B1318 53.927 125.596 81.334 1.00 28.39 N
ATOM 15 C2 U B1318 54.913 126.459 81.793 1.00 28.09 C
ATOM 16 O2 U B1318 54.672 127.432 82.482 1.00 28.79 O
ATOM 17 N3 U B1318 56.188 126.140 81.411 1.00 25.56 N
ATOM 18 C4 U B1318 56.577 125.079 80.627 1.00 28.27 C
ATOM 19 O4 U B1318 57.777 124.886 80.428 1.00 30.23 O
ATOM 20 C5 U B1318 55.503 124.256 80.158 1.00 27.77 C
ATOM 21 C6 U B1318 54.245 124.537 80.515 1.00 27.34 C
ATOM 22 P C B1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 23 OP1 C B1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 24 OP2 C B1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 25 O5' C B1319 49.357 127.071 77.882 1.00 26.82 O
TER
ATOM 2 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 3 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 4 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 5 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
ATOM 6 C5' G A2378 59.393 121.392 88.221 1.00 38.68 C
ATOM 7 C4' G A2378 58.139 121.991 87.643 1.00 41.84 C
ATOM 8 O4' G A2378 57.553 121.062 86.713 1.00 43.10 O
ATOM 9 C3' G A2378 57.006 122.193 88.639 1.00 43.43 C
ATOM 10 O3' G A2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 11 C2' G A2378 55.762 122.248 87.741 1.00 42.00 C
ATOM 12 O2' G A2378 55.440 123.552 87.306 1.00 40.15 O
ATOM 13 C1' G A2378 56.215 121.442 86.514 1.00 43.17 C
ATOM 14 N9 G A2378 55.439 120.283 86.082 1.00 42.93 N
ATOM 15 C8 G A2378 55.434 119.019 86.622 1.00 42.14 C
ATOM 16 N7 G A2378 54.653 118.192 85.978 1.00 41.44 N
ATOM 17 C5 G A2378 54.104 118.958 84.957 1.00 42.14 C
ATOM 18 C6 G A2378 53.180 118.608 83.932 1.00 41.82 C
ATOM 19 O6 G A2378 52.636 117.518 83.726 1.00 41.75 O
ATOM 20 N1 G A2378 52.899 119.691 83.103 1.00 41.38 N
ATOM 21 C2 G A2378 53.428 120.951 83.241 1.00 42.24 C
ATOM 22 N2 G A2378 53.036 121.865 82.341 1.00 38.70 N
ATOM 23 N3 G A2378 54.282 121.292 84.194 1.00 43.21 N
ATOM 24 C4 G A2378 54.575 120.252 85.010 1.00 42.55 C
ATOM 25 P A A2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 26 OP1 A A2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 27 OP2 A A2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 28 O5' A A2379 57.438 122.465 91.707 1.00 46.93 O
TER
ATOM 1 O3' A B1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 2 P U B1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 3 OP1 U B1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 4 OP2 U B1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 5 O5' U B1318 50.219 123.754 79.245 1.00 25.49 O
ATOM 6 C5' U B1318 49.748 123.886 80.594 1.00 28.51 C
ATOM 7 C4' U B1318 50.440 125.046 81.272 1.00 29.46 C
ATOM 8 O4' U B1318 51.787 124.672 81.621 1.00 30.26 O
ATOM 9 C3' U B1318 50.650 126.277 80.409 1.00 29.45 C
ATOM 10 O3' U B1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 11 C2' U B1318 51.789 127.005 81.128 1.00 32.77 C
ATOM 12 O2' U B1318 51.358 127.903 82.134 1.00 35.33 O
ATOM 13 C1' U B1318 52.550 125.845 81.785 1.00 29.46 C
ATOM 14 N1 U B1318 53.927 125.596 81.334 1.00 28.39 N
ATOM 15 C2 U B1318 54.913 126.459 81.793 1.00 28.09 C
ATOM 16 O2 U B1318 54.672 127.432 82.482 1.00 28.79 O
ATOM 17 N3 U B1318 56.188 126.140 81.411 1.00 25.56 N
ATOM 18 C4 U B1318 56.577 125.079 80.627 1.00 28.27 C
ATOM 19 O4 U B1318 57.777 124.886 80.428 1.00 30.23 O
ATOM 20 C5 U B1318 55.503 124.256 80.158 1.00 27.77 C
ATOM 21 C6 U B1318 54.245 124.537 80.515 1.00 27.34 C
ATOM 22 P C B1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 23 OP1 C B1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 24 OP2 C B1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 25 O5' C B1319 49.357 127.071 77.882 1.00 26.82 O
TER
Atoms:
OP1: (58.199,117.980,88.885)
OP2: (60.204,118.788,87.502)
C3': (57.006,122.193,88.639)
C1': (56.215,121.442,86.514)
C5': (59.393,121.392,88.221)
O6: (52.636,117.518,83.726)
O4': (57.553,121.062,86.713)
C8: (55.434,119.019,86.622)
C2: (53.428,120.951,83.241)
C6: (53.180,118.608,83.932)
C5: (54.104,118.958,84.957)
C4: (54.575,120.252,85.010)
P: (59.428,118.808,88.766)
C4': (58.139,121.991,87.643)
C2': (55.762,122.248,87.741)
O2': (55.440,123.552,87.306)
N1: (52.899,119.691,83.103)
N2: (53.036,121.865,82.341)
N3: (54.282,121.292,84.194)
N7: (54.653,118.192,85.978)
N9: (55.439,120.283,86.082)
O5': (59.046,120.314,89.099)
O3': (57.240,123.421,89.335)
OP2: (60.204,118.788,87.502)
C3': (57.006,122.193,88.639)
C1': (56.215,121.442,86.514)
C5': (59.393,121.392,88.221)
O6: (52.636,117.518,83.726)
O4': (57.553,121.062,86.713)
C8: (55.434,119.019,86.622)
C2: (53.428,120.951,83.241)
C6: (53.180,118.608,83.932)
C5: (54.104,118.958,84.957)
C4: (54.575,120.252,85.010)
P: (59.428,118.808,88.766)
C4': (58.139,121.991,87.643)
C2': (55.762,122.248,87.741)
O2': (55.440,123.552,87.306)
N1: (52.899,119.691,83.103)
N2: (53.036,121.865,82.341)
N3: (54.282,121.292,84.194)
N7: (54.653,118.192,85.978)
N9: (55.439,120.283,86.082)
O5': (59.046,120.314,89.099)
O3': (57.240,123.421,89.335)
C4: (56.577,125.079,80.627)
N3: (56.188,126.140,81.411)
OP1: (51.301,122.647,77.313)
OP2: (51.949,122.010,79.714)
C2: (54.913,126.459,81.793)
C1': (52.550,125.845,81.785)
C3': (50.650,126.277,80.409)
O5': (50.219,123.754,79.245)
O4': (51.787,124.672,81.621)
C5': (49.748,123.886,80.594)
P: (50.919,122.423,78.730)
C4': (50.440,125.046,81.272)
C2': (51.789,127.005,81.128)
O2': (51.358,127.903,82.134)
N1: (53.927,125.596,81.334)
O4: (57.777,124.886,80.428)
O2: (54.672,127.432,82.482)
C6: (54.245,124.537,80.515)
C5: (55.503,124.256,80.158)
O3': (49.462,127.049,80.409)
N3: (56.188,126.140,81.411)
OP1: (51.301,122.647,77.313)
OP2: (51.949,122.010,79.714)
C2: (54.913,126.459,81.793)
C1': (52.550,125.845,81.785)
C3': (50.650,126.277,80.409)
O5': (50.219,123.754,79.245)
O4': (51.787,124.672,81.621)
C5': (49.748,123.886,80.594)
P: (50.919,122.423,78.730)
C4': (50.440,125.046,81.272)
C2': (51.789,127.005,81.128)
O2': (51.358,127.903,82.134)
N1: (53.927,125.596,81.334)
O4: (57.777,124.886,80.428)
O2: (54.672,127.432,82.482)
C6: (54.245,124.537,80.515)
C5: (55.503,124.256,80.158)
O3': (49.462,127.049,80.409)
Image (generated by PyMOL):