Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02079:02105
Extra
PDB:
ATOM 1 O3' C A2078 109.546 110.891 31.842 1.00 55.93 O
ATOM 2 P U A2079 111.036 110.992 31.246 1.00 57.80 P
ATOM 3 OP1 U A2079 111.654 112.203 31.846 1.00 56.71 O
ATOM 4 OP2 U A2079 110.925 110.876 29.762 1.00 56.25 O
ATOM 5 O5' U A2079 111.815 109.709 31.776 1.00 54.85 O
ATOM 6 C5' U A2079 113.002 109.268 31.103 1.00 57.25 C
ATOM 7 C4' U A2079 113.603 108.079 31.805 1.00 59.86 C
ATOM 8 O4' U A2079 114.177 108.498 33.071 1.00 59.58 O
ATOM 9 C3' U A2079 112.650 106.932 32.122 1.00 62.01 C
ATOM 10 O3' U A2079 113.374 105.704 32.069 1.00 66.75 O
ATOM 11 C2' U A2079 112.277 107.221 33.576 1.00 61.72 C
ATOM 12 O2' U A2079 111.887 106.069 34.299 1.00 62.42 O
ATOM 13 C1' U A2079 113.607 107.739 34.114 1.00 59.31 C
ATOM 14 N1 U A2079 113.543 108.574 35.323 1.00 57.46 N
ATOM 15 C2 U A2079 114.002 108.016 36.496 1.00 58.02 C
ATOM 16 O2 U A2079 114.363 106.854 36.582 1.00 60.35 O
ATOM 17 N3 U A2079 114.013 108.860 37.575 1.00 57.64 N
ATOM 18 C4 U A2079 113.596 110.166 37.607 1.00 57.60 C
ATOM 19 O4 U A2079 113.753 110.820 38.640 1.00 60.23 O
ATOM 20 C5 U A2079 113.082 110.659 36.366 1.00 56.33 C
ATOM 21 C6 U A2079 113.077 109.868 35.293 1.00 56.66 C
ATOM 22 P G A2080 113.740 105.040 30.650 1.00 69.71 P
ATOM 23 OP1 G A2080 112.737 105.512 29.647 1.00 67.10 O
ATOM 24 OP2 G A2080 113.906 103.581 30.891 1.00 69.04 O
ATOM 25 O5' G A2080 115.181 105.650 30.312 1.00 71.22 O
TER
ATOM 1 O3' A B2104 116.883 108.163 39.291 1.00 69.65 O
ATOM 2 P C B2105 116.135 107.056 40.195 1.00 68.65 P
ATOM 3 OP1 C B2105 116.961 105.819 40.267 1.00 66.71 O
ATOM 4 OP2 C B2105 114.734 106.963 39.705 1.00 67.72 O
ATOM 5 O5' C B2105 116.094 107.755 41.632 1.00 67.31 O
ATOM 6 C5' C B2105 117.019 107.382 42.671 1.00 65.21 C
ATOM 7 C4' C B2105 117.478 108.599 43.450 1.00 64.29 C
ATOM 8 O4' C B2105 118.182 109.516 42.570 1.00 62.67 O
ATOM 9 C3' C B2105 116.418 109.492 44.074 1.00 63.91 C
ATOM 10 O3' C B2105 115.877 108.962 45.278 1.00 64.26 O
ATOM 11 C2' C B2105 117.208 110.767 44.344 1.00 62.07 C
ATOM 12 O2' C B2105 118.025 110.687 45.492 1.00 62.36 O
ATOM 13 C1' C B2105 118.099 110.831 43.104 1.00 60.75 C
ATOM 14 N1 C B2105 117.568 111.745 42.078 1.00 58.26 N
ATOM 15 C2 C B2105 117.668 113.127 42.301 1.00 57.97 C
ATOM 16 O2 C B2105 118.187 113.533 43.358 1.00 57.82 O
ATOM 17 N3 C B2105 117.195 113.983 41.366 1.00 57.52 N
ATOM 18 C4 C B2105 116.636 113.510 40.249 1.00 57.85 C
ATOM 19 N4 C B2105 116.182 114.394 39.355 1.00 56.89 N
ATOM 20 C5 C B2105 116.515 112.109 40.000 1.00 57.67 C
ATOM 21 C6 C B2105 116.990 111.271 40.932 1.00 57.82 C
ATOM 22 P A B2106 114.365 109.321 45.692 1.00 63.99 P
ATOM 23 OP1 A B2106 114.146 108.775 47.055 1.00 66.13 O
ATOM 24 OP2 A B2106 113.469 108.902 44.580 1.00 64.03 O
ATOM 25 O5' A B2106 114.348 110.912 45.788 1.00 61.20 O
TER
ATOM 2 P U A2079 111.036 110.992 31.246 1.00 57.80 P
ATOM 3 OP1 U A2079 111.654 112.203 31.846 1.00 56.71 O
ATOM 4 OP2 U A2079 110.925 110.876 29.762 1.00 56.25 O
ATOM 5 O5' U A2079 111.815 109.709 31.776 1.00 54.85 O
ATOM 6 C5' U A2079 113.002 109.268 31.103 1.00 57.25 C
ATOM 7 C4' U A2079 113.603 108.079 31.805 1.00 59.86 C
ATOM 8 O4' U A2079 114.177 108.498 33.071 1.00 59.58 O
ATOM 9 C3' U A2079 112.650 106.932 32.122 1.00 62.01 C
ATOM 10 O3' U A2079 113.374 105.704 32.069 1.00 66.75 O
ATOM 11 C2' U A2079 112.277 107.221 33.576 1.00 61.72 C
ATOM 12 O2' U A2079 111.887 106.069 34.299 1.00 62.42 O
ATOM 13 C1' U A2079 113.607 107.739 34.114 1.00 59.31 C
ATOM 14 N1 U A2079 113.543 108.574 35.323 1.00 57.46 N
ATOM 15 C2 U A2079 114.002 108.016 36.496 1.00 58.02 C
ATOM 16 O2 U A2079 114.363 106.854 36.582 1.00 60.35 O
ATOM 17 N3 U A2079 114.013 108.860 37.575 1.00 57.64 N
ATOM 18 C4 U A2079 113.596 110.166 37.607 1.00 57.60 C
ATOM 19 O4 U A2079 113.753 110.820 38.640 1.00 60.23 O
ATOM 20 C5 U A2079 113.082 110.659 36.366 1.00 56.33 C
ATOM 21 C6 U A2079 113.077 109.868 35.293 1.00 56.66 C
ATOM 22 P G A2080 113.740 105.040 30.650 1.00 69.71 P
ATOM 23 OP1 G A2080 112.737 105.512 29.647 1.00 67.10 O
ATOM 24 OP2 G A2080 113.906 103.581 30.891 1.00 69.04 O
ATOM 25 O5' G A2080 115.181 105.650 30.312 1.00 71.22 O
TER
ATOM 1 O3' A B2104 116.883 108.163 39.291 1.00 69.65 O
ATOM 2 P C B2105 116.135 107.056 40.195 1.00 68.65 P
ATOM 3 OP1 C B2105 116.961 105.819 40.267 1.00 66.71 O
ATOM 4 OP2 C B2105 114.734 106.963 39.705 1.00 67.72 O
ATOM 5 O5' C B2105 116.094 107.755 41.632 1.00 67.31 O
ATOM 6 C5' C B2105 117.019 107.382 42.671 1.00 65.21 C
ATOM 7 C4' C B2105 117.478 108.599 43.450 1.00 64.29 C
ATOM 8 O4' C B2105 118.182 109.516 42.570 1.00 62.67 O
ATOM 9 C3' C B2105 116.418 109.492 44.074 1.00 63.91 C
ATOM 10 O3' C B2105 115.877 108.962 45.278 1.00 64.26 O
ATOM 11 C2' C B2105 117.208 110.767 44.344 1.00 62.07 C
ATOM 12 O2' C B2105 118.025 110.687 45.492 1.00 62.36 O
ATOM 13 C1' C B2105 118.099 110.831 43.104 1.00 60.75 C
ATOM 14 N1 C B2105 117.568 111.745 42.078 1.00 58.26 N
ATOM 15 C2 C B2105 117.668 113.127 42.301 1.00 57.97 C
ATOM 16 O2 C B2105 118.187 113.533 43.358 1.00 57.82 O
ATOM 17 N3 C B2105 117.195 113.983 41.366 1.00 57.52 N
ATOM 18 C4 C B2105 116.636 113.510 40.249 1.00 57.85 C
ATOM 19 N4 C B2105 116.182 114.394 39.355 1.00 56.89 N
ATOM 20 C5 C B2105 116.515 112.109 40.000 1.00 57.67 C
ATOM 21 C6 C B2105 116.990 111.271 40.932 1.00 57.82 C
ATOM 22 P A B2106 114.365 109.321 45.692 1.00 63.99 P
ATOM 23 OP1 A B2106 114.146 108.775 47.055 1.00 66.13 O
ATOM 24 OP2 A B2106 113.469 108.902 44.580 1.00 64.03 O
ATOM 25 O5' A B2106 114.348 110.912 45.788 1.00 61.20 O
TER
Atoms:
C4: (113.596,110.166,37.607)
N3: (114.013,108.860,37.575)
OP1: (111.654,112.203,31.846)
OP2: (110.925,110.876,29.762)
C2: (114.002,108.016,36.496)
C1': (113.607,107.739,34.114)
C3': (112.650,106.932,32.122)
O5': (111.815,109.709,31.776)
O4': (114.177,108.498,33.071)
C5': (113.002,109.268,31.103)
P: (111.036,110.992,31.246)
C4': (113.603,108.079,31.805)
C2': (112.277,107.221,33.576)
O2': (111.887,106.069,34.299)
N1: (113.543,108.574,35.323)
O4: (113.753,110.820,38.640)
O2: (114.363,106.854,36.582)
C6: (113.077,109.868,35.293)
C5: (113.082,110.659,36.366)
O3': (113.374,105.704,32.069)
N3: (114.013,108.860,37.575)
OP1: (111.654,112.203,31.846)
OP2: (110.925,110.876,29.762)
C2: (114.002,108.016,36.496)
C1': (113.607,107.739,34.114)
C3': (112.650,106.932,32.122)
O5': (111.815,109.709,31.776)
O4': (114.177,108.498,33.071)
C5': (113.002,109.268,31.103)
P: (111.036,110.992,31.246)
C4': (113.603,108.079,31.805)
C2': (112.277,107.221,33.576)
O2': (111.887,106.069,34.299)
N1: (113.543,108.574,35.323)
O4: (113.753,110.820,38.640)
O2: (114.363,106.854,36.582)
C6: (113.077,109.868,35.293)
C5: (113.082,110.659,36.366)
O3': (113.374,105.704,32.069)
C2: (117.668,113.127,42.301)
OP1: (116.961,105.819,40.267)
OP2: (114.734,106.963,39.705)
C4: (116.636,113.510,40.249)
O5': (116.094,107.755,41.632)
C3': (116.418,109.492,44.074)
C1': (118.099,110.831,43.104)
O4': (118.182,109.516,42.570)
C5': (117.019,107.382,42.671)
P: (116.135,107.056,40.195)
O2: (118.187,113.533,43.358)
C4': (117.478,108.599,43.450)
C2': (117.208,110.767,44.344)
O2': (118.025,110.687,45.492)
N1: (117.568,111.745,42.078)
N3: (117.195,113.983,41.366)
N4: (116.182,114.394,39.355)
C6: (116.990,111.271,40.932)
C5: (116.515,112.109,40.000)
O3': (115.877,108.962,45.278)
OP1: (116.961,105.819,40.267)
OP2: (114.734,106.963,39.705)
C4: (116.636,113.510,40.249)
O5': (116.094,107.755,41.632)
C3': (116.418,109.492,44.074)
C1': (118.099,110.831,43.104)
O4': (118.182,109.516,42.570)
C5': (117.019,107.382,42.671)
P: (116.135,107.056,40.195)
O2: (118.187,113.533,43.358)
C4': (117.478,108.599,43.450)
C2': (117.208,110.767,44.344)
O2': (118.025,110.687,45.492)
N1: (117.568,111.745,42.078)
N3: (117.195,113.983,41.366)
N4: (116.182,114.394,39.355)
C6: (116.990,111.271,40.932)
C5: (116.515,112.109,40.000)
O3': (115.877,108.962,45.278)
Image (generated by PyMOL):