Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02378:01318
Extra
PDB:
ATOM 1 O3' C A2377 60.457 118.209 90.051 1.00 35.02 O
ATOM 2 P G A2378 59.487 118.466 88.808 1.00 35.81 P
ATOM 3 OP1 G A2378 58.393 117.459 88.878 1.00 36.21 O
ATOM 4 OP2 G A2378 60.312 118.569 87.581 1.00 36.39 O
ATOM 5 O5' G A2378 58.864 119.890 89.126 1.00 34.02 O
ATOM 6 C5' G A2378 59.241 121.053 88.385 1.00 34.59 C
ATOM 7 C4' G A2378 58.009 121.732 87.847 1.00 37.21 C
ATOM 8 O4' G A2378 57.459 120.948 86.774 1.00 37.67 O
ATOM 9 C3' G A2378 56.845 121.828 88.818 1.00 37.46 C
ATOM 10 O3' G A2378 57.048 122.972 89.649 1.00 41.40 O
ATOM 11 C2' G A2378 55.651 122.027 87.884 1.00 36.49 C
ATOM 12 O2' G A2378 55.458 123.387 87.569 1.00 37.55 O
ATOM 13 C1' G A2378 56.109 121.307 86.608 1.00 37.24 C
ATOM 14 N9 G A2378 55.369 120.132 86.160 1.00 38.02 N
ATOM 15 C8 G A2378 55.397 118.870 86.702 1.00 38.21 C
ATOM 16 N7 G A2378 54.662 118.013 86.046 1.00 37.73 N
ATOM 17 C5 G A2378 54.107 118.754 85.013 1.00 38.76 C
ATOM 18 C6 G A2378 53.225 118.363 83.971 1.00 40.07 C
ATOM 19 O6 G A2378 52.736 117.243 83.754 1.00 40.72 O
ATOM 20 N1 G A2378 52.914 119.433 83.135 1.00 38.44 N
ATOM 21 C2 G A2378 53.383 120.715 83.287 1.00 37.29 C
ATOM 22 N2 G A2378 52.967 121.612 82.381 1.00 35.34 N
ATOM 23 N3 G A2378 54.200 121.092 84.256 1.00 37.78 N
ATOM 24 C4 G A2378 54.522 120.067 85.074 1.00 37.73 C
ATOM 25 P A A2379 56.674 122.928 91.213 1.00 44.08 P
ATOM 26 OP1 A A2379 55.303 122.379 91.356 1.00 46.93 O
ATOM 27 OP2 A A2379 56.985 124.273 91.756 1.00 43.68 O
ATOM 28 O5' A A2379 57.675 121.873 91.853 1.00 43.55 O
TER
ATOM 1 O3' A B1317 49.905 121.079 78.804 1.00 27.00 O
ATOM 2 P U B1318 51.036 122.210 78.748 1.00 27.56 P
ATOM 3 OP1 U B1318 51.499 122.395 77.357 1.00 25.69 O
ATOM 4 OP2 U B1318 51.993 121.774 79.796 1.00 25.52 O
ATOM 5 O5' U B1318 50.312 123.558 79.197 1.00 25.71 O
ATOM 6 C5' U B1318 49.792 123.722 80.529 1.00 27.63 C
ATOM 7 C4' U B1318 50.522 124.835 81.250 1.00 28.09 C
ATOM 8 O4' U B1318 51.873 124.430 81.556 1.00 28.39 O
ATOM 9 C3' U B1318 50.747 126.099 80.444 1.00 29.00 C
ATOM 10 O3' U B1318 49.570 126.890 80.458 1.00 28.40 O
ATOM 11 C2' U B1318 51.889 126.784 81.198 1.00 29.86 C
ATOM 12 O2' U B1318 51.459 127.610 82.258 1.00 31.87 O
ATOM 13 C1' U B1318 52.643 125.590 81.791 1.00 27.99 C
ATOM 14 N1 U B1318 54.024 125.375 81.329 1.00 27.59 N
ATOM 15 C2 U B1318 55.010 126.203 81.852 1.00 26.45 C
ATOM 16 O2 U B1318 54.774 127.119 82.621 1.00 27.10 O
ATOM 17 N3 U B1318 56.282 125.918 81.442 1.00 24.63 N
ATOM 18 C4 U B1318 56.670 124.928 80.583 1.00 24.88 C
ATOM 19 O4 U B1318 57.865 124.752 80.379 1.00 24.62 O
ATOM 20 C5 U B1318 55.601 124.136 80.062 1.00 26.24 C
ATOM 21 C6 U B1318 54.346 124.382 80.441 1.00 25.87 C
ATOM 22 P C B1319 49.221 127.821 79.207 1.00 27.07 P
ATOM 23 OP1 C B1319 50.171 128.950 79.211 1.00 29.40 O
ATOM 24 OP2 C B1319 47.770 128.091 79.276 1.00 27.15 O
ATOM 25 O5' C B1319 49.523 126.900 77.942 1.00 25.59 O
TER
ATOM 2 P G A2378 59.487 118.466 88.808 1.00 35.81 P
ATOM 3 OP1 G A2378 58.393 117.459 88.878 1.00 36.21 O
ATOM 4 OP2 G A2378 60.312 118.569 87.581 1.00 36.39 O
ATOM 5 O5' G A2378 58.864 119.890 89.126 1.00 34.02 O
ATOM 6 C5' G A2378 59.241 121.053 88.385 1.00 34.59 C
ATOM 7 C4' G A2378 58.009 121.732 87.847 1.00 37.21 C
ATOM 8 O4' G A2378 57.459 120.948 86.774 1.00 37.67 O
ATOM 9 C3' G A2378 56.845 121.828 88.818 1.00 37.46 C
ATOM 10 O3' G A2378 57.048 122.972 89.649 1.00 41.40 O
ATOM 11 C2' G A2378 55.651 122.027 87.884 1.00 36.49 C
ATOM 12 O2' G A2378 55.458 123.387 87.569 1.00 37.55 O
ATOM 13 C1' G A2378 56.109 121.307 86.608 1.00 37.24 C
ATOM 14 N9 G A2378 55.369 120.132 86.160 1.00 38.02 N
ATOM 15 C8 G A2378 55.397 118.870 86.702 1.00 38.21 C
ATOM 16 N7 G A2378 54.662 118.013 86.046 1.00 37.73 N
ATOM 17 C5 G A2378 54.107 118.754 85.013 1.00 38.76 C
ATOM 18 C6 G A2378 53.225 118.363 83.971 1.00 40.07 C
ATOM 19 O6 G A2378 52.736 117.243 83.754 1.00 40.72 O
ATOM 20 N1 G A2378 52.914 119.433 83.135 1.00 38.44 N
ATOM 21 C2 G A2378 53.383 120.715 83.287 1.00 37.29 C
ATOM 22 N2 G A2378 52.967 121.612 82.381 1.00 35.34 N
ATOM 23 N3 G A2378 54.200 121.092 84.256 1.00 37.78 N
ATOM 24 C4 G A2378 54.522 120.067 85.074 1.00 37.73 C
ATOM 25 P A A2379 56.674 122.928 91.213 1.00 44.08 P
ATOM 26 OP1 A A2379 55.303 122.379 91.356 1.00 46.93 O
ATOM 27 OP2 A A2379 56.985 124.273 91.756 1.00 43.68 O
ATOM 28 O5' A A2379 57.675 121.873 91.853 1.00 43.55 O
TER
ATOM 1 O3' A B1317 49.905 121.079 78.804 1.00 27.00 O
ATOM 2 P U B1318 51.036 122.210 78.748 1.00 27.56 P
ATOM 3 OP1 U B1318 51.499 122.395 77.357 1.00 25.69 O
ATOM 4 OP2 U B1318 51.993 121.774 79.796 1.00 25.52 O
ATOM 5 O5' U B1318 50.312 123.558 79.197 1.00 25.71 O
ATOM 6 C5' U B1318 49.792 123.722 80.529 1.00 27.63 C
ATOM 7 C4' U B1318 50.522 124.835 81.250 1.00 28.09 C
ATOM 8 O4' U B1318 51.873 124.430 81.556 1.00 28.39 O
ATOM 9 C3' U B1318 50.747 126.099 80.444 1.00 29.00 C
ATOM 10 O3' U B1318 49.570 126.890 80.458 1.00 28.40 O
ATOM 11 C2' U B1318 51.889 126.784 81.198 1.00 29.86 C
ATOM 12 O2' U B1318 51.459 127.610 82.258 1.00 31.87 O
ATOM 13 C1' U B1318 52.643 125.590 81.791 1.00 27.99 C
ATOM 14 N1 U B1318 54.024 125.375 81.329 1.00 27.59 N
ATOM 15 C2 U B1318 55.010 126.203 81.852 1.00 26.45 C
ATOM 16 O2 U B1318 54.774 127.119 82.621 1.00 27.10 O
ATOM 17 N3 U B1318 56.282 125.918 81.442 1.00 24.63 N
ATOM 18 C4 U B1318 56.670 124.928 80.583 1.00 24.88 C
ATOM 19 O4 U B1318 57.865 124.752 80.379 1.00 24.62 O
ATOM 20 C5 U B1318 55.601 124.136 80.062 1.00 26.24 C
ATOM 21 C6 U B1318 54.346 124.382 80.441 1.00 25.87 C
ATOM 22 P C B1319 49.221 127.821 79.207 1.00 27.07 P
ATOM 23 OP1 C B1319 50.171 128.950 79.211 1.00 29.40 O
ATOM 24 OP2 C B1319 47.770 128.091 79.276 1.00 27.15 O
ATOM 25 O5' C B1319 49.523 126.900 77.942 1.00 25.59 O
TER
Atoms:
OP1: (58.393,117.459,88.878)
OP2: (60.312,118.569,87.581)
C3': (56.845,121.828,88.818)
C1': (56.109,121.307,86.608)
C5': (59.241,121.053,88.385)
O6: (52.736,117.243,83.754)
O4': (57.459,120.948,86.774)
C8: (55.397,118.870,86.702)
C2: (53.383,120.715,83.287)
C6: (53.225,118.363,83.971)
C5: (54.107,118.754,85.013)
C4: (54.522,120.067,85.074)
P: (59.487,118.466,88.808)
C4': (58.009,121.732,87.847)
C2': (55.651,122.027,87.884)
O2': (55.458,123.387,87.569)
N1: (52.914,119.433,83.135)
N2: (52.967,121.612,82.381)
N3: (54.200,121.092,84.256)
N7: (54.662,118.013,86.046)
N9: (55.369,120.132,86.160)
O5': (58.864,119.890,89.126)
O3': (57.048,122.972,89.649)
OP2: (60.312,118.569,87.581)
C3': (56.845,121.828,88.818)
C1': (56.109,121.307,86.608)
C5': (59.241,121.053,88.385)
O6: (52.736,117.243,83.754)
O4': (57.459,120.948,86.774)
C8: (55.397,118.870,86.702)
C2: (53.383,120.715,83.287)
C6: (53.225,118.363,83.971)
C5: (54.107,118.754,85.013)
C4: (54.522,120.067,85.074)
P: (59.487,118.466,88.808)
C4': (58.009,121.732,87.847)
C2': (55.651,122.027,87.884)
O2': (55.458,123.387,87.569)
N1: (52.914,119.433,83.135)
N2: (52.967,121.612,82.381)
N3: (54.200,121.092,84.256)
N7: (54.662,118.013,86.046)
N9: (55.369,120.132,86.160)
O5': (58.864,119.890,89.126)
O3': (57.048,122.972,89.649)
C4: (56.670,124.928,80.583)
N3: (56.282,125.918,81.442)
OP1: (51.499,122.395,77.357)
OP2: (51.993,121.774,79.796)
C2: (55.010,126.203,81.852)
C1': (52.643,125.590,81.791)
C3': (50.747,126.099,80.444)
O5': (50.312,123.558,79.197)
O4': (51.873,124.430,81.556)
C5': (49.792,123.722,80.529)
P: (51.036,122.210,78.748)
C4': (50.522,124.835,81.250)
C2': (51.889,126.784,81.198)
O2': (51.459,127.610,82.258)
N1: (54.024,125.375,81.329)
O4: (57.865,124.752,80.379)
O2: (54.774,127.119,82.621)
C6: (54.346,124.382,80.441)
C5: (55.601,124.136,80.062)
O3': (49.570,126.890,80.458)
N3: (56.282,125.918,81.442)
OP1: (51.499,122.395,77.357)
OP2: (51.993,121.774,79.796)
C2: (55.010,126.203,81.852)
C1': (52.643,125.590,81.791)
C3': (50.747,126.099,80.444)
O5': (50.312,123.558,79.197)
O4': (51.873,124.430,81.556)
C5': (49.792,123.722,80.529)
P: (51.036,122.210,78.748)
C4': (50.522,124.835,81.250)
C2': (51.889,126.784,81.198)
O2': (51.459,127.610,82.258)
N1: (54.024,125.375,81.329)
O4: (57.865,124.752,80.379)
O2: (54.774,127.119,82.621)
C6: (54.346,124.382,80.441)
C5: (55.601,124.136,80.062)
O3': (49.570,126.890,80.458)
Image (generated by PyMOL):