Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02378:01318
Extra
PDB:
ATOM 1 O3' C A2377 60.689 118.457 90.304 1.00 38.53 O
ATOM 2 P G A2378 59.716 118.825 89.086 1.00 39.63 P
ATOM 3 OP1 G A2378 58.611 117.839 89.086 1.00 42.38 O
ATOM 4 OP2 G A2378 60.518 119.027 87.853 1.00 39.19 O
ATOM 5 O5' G A2378 59.109 120.224 89.513 1.00 39.38 O
ATOM 6 C5' G A2378 59.508 121.431 88.860 1.00 42.02 C
ATOM 7 C4' G A2378 58.295 122.123 88.307 1.00 44.49 C
ATOM 8 O4' G A2378 57.758 121.339 87.226 1.00 45.06 O
ATOM 9 C3' G A2378 57.130 122.202 89.275 1.00 44.56 C
ATOM 10 O3' G A2378 57.330 123.350 90.095 1.00 47.43 O
ATOM 11 C2' G A2378 55.936 122.387 88.342 1.00 43.22 C
ATOM 12 O2' G A2378 55.762 123.736 87.997 1.00 44.52 O
ATOM 13 C1' G A2378 56.403 121.666 87.072 1.00 43.50 C
ATOM 14 N9 G A2378 55.679 120.478 86.635 1.00 42.66 N
ATOM 15 C8 G A2378 55.730 119.216 87.170 1.00 41.80 C
ATOM 16 N7 G A2378 54.994 118.357 86.520 1.00 41.58 N
ATOM 17 C5 G A2378 54.416 119.102 85.502 1.00 41.64 C
ATOM 18 C6 G A2378 53.527 118.712 84.473 1.00 41.49 C
ATOM 19 O6 G A2378 53.041 117.599 84.263 1.00 43.72 O
ATOM 20 N1 G A2378 53.206 119.780 83.641 1.00 41.00 N
ATOM 21 C2 G A2378 53.672 121.064 83.790 1.00 41.63 C
ATOM 22 N2 G A2378 53.259 121.963 82.884 1.00 40.14 N
ATOM 23 N3 G A2378 54.489 121.441 84.755 1.00 41.86 N
ATOM 24 C4 G A2378 54.823 120.413 85.565 1.00 41.94 C
ATOM 25 P A A2379 57.013 123.295 91.667 1.00 49.48 P
ATOM 26 OP1 A A2379 55.622 122.807 91.844 1.00 51.04 O
ATOM 27 OP2 A A2379 57.408 124.617 92.214 1.00 49.25 O
ATOM 28 O5' A A2379 57.988 122.185 92.257 1.00 49.90 O
TER
ATOM 1 O3' A B1317 50.169 121.404 79.138 1.00 35.04 O
ATOM 2 P U B1318 51.291 122.559 79.131 1.00 35.33 P
ATOM 3 OP1 U B1318 51.832 122.753 77.763 1.00 34.31 O
ATOM 4 OP2 U B1318 52.201 122.186 80.226 1.00 35.92 O
ATOM 5 O5' U B1318 50.532 123.888 79.569 1.00 35.49 O
ATOM 6 C5' U B1318 49.962 124.032 80.888 1.00 38.06 C
ATOM 7 C4' U B1318 50.630 125.174 81.626 1.00 39.93 C
ATOM 8 O4' U B1318 51.980 124.799 81.972 1.00 41.02 O
ATOM 9 C3' U B1318 50.849 126.439 80.815 1.00 40.11 C
ATOM 10 O3' U B1318 49.653 127.210 80.789 1.00 38.86 O
ATOM 11 C2' U B1318 51.974 127.149 81.575 1.00 40.30 C
ATOM 12 O2' U B1318 51.526 127.961 82.640 1.00 43.86 O
ATOM 13 C1' U B1318 52.733 125.973 82.191 1.00 39.17 C
ATOM 14 N1 U B1318 54.128 125.759 81.775 1.00 37.83 N
ATOM 15 C2 U B1318 55.092 126.588 82.330 1.00 37.79 C
ATOM 16 O2 U B1318 54.828 127.493 83.106 1.00 39.36 O
ATOM 17 N3 U B1318 56.378 126.320 81.946 1.00 36.00 N
ATOM 18 C4 U B1318 56.794 125.341 81.089 1.00 35.61 C
ATOM 19 O4 U B1318 57.987 125.234 80.844 1.00 35.81 O
ATOM 20 C5 U B1318 55.748 124.532 80.547 1.00 36.74 C
ATOM 21 C6 U B1318 54.481 124.766 80.896 1.00 37.01 C
ATOM 22 P C B1319 49.354 128.170 79.545 1.00 37.77 P
ATOM 23 OP1 C B1319 50.338 129.268 79.580 1.00 41.27 O
ATOM 24 OP2 C B1319 47.917 128.489 79.558 1.00 38.47 O
ATOM 25 O5' C B1319 49.675 127.263 78.280 1.00 38.29 O
TER
ATOM 2 P G A2378 59.716 118.825 89.086 1.00 39.63 P
ATOM 3 OP1 G A2378 58.611 117.839 89.086 1.00 42.38 O
ATOM 4 OP2 G A2378 60.518 119.027 87.853 1.00 39.19 O
ATOM 5 O5' G A2378 59.109 120.224 89.513 1.00 39.38 O
ATOM 6 C5' G A2378 59.508 121.431 88.860 1.00 42.02 C
ATOM 7 C4' G A2378 58.295 122.123 88.307 1.00 44.49 C
ATOM 8 O4' G A2378 57.758 121.339 87.226 1.00 45.06 O
ATOM 9 C3' G A2378 57.130 122.202 89.275 1.00 44.56 C
ATOM 10 O3' G A2378 57.330 123.350 90.095 1.00 47.43 O
ATOM 11 C2' G A2378 55.936 122.387 88.342 1.00 43.22 C
ATOM 12 O2' G A2378 55.762 123.736 87.997 1.00 44.52 O
ATOM 13 C1' G A2378 56.403 121.666 87.072 1.00 43.50 C
ATOM 14 N9 G A2378 55.679 120.478 86.635 1.00 42.66 N
ATOM 15 C8 G A2378 55.730 119.216 87.170 1.00 41.80 C
ATOM 16 N7 G A2378 54.994 118.357 86.520 1.00 41.58 N
ATOM 17 C5 G A2378 54.416 119.102 85.502 1.00 41.64 C
ATOM 18 C6 G A2378 53.527 118.712 84.473 1.00 41.49 C
ATOM 19 O6 G A2378 53.041 117.599 84.263 1.00 43.72 O
ATOM 20 N1 G A2378 53.206 119.780 83.641 1.00 41.00 N
ATOM 21 C2 G A2378 53.672 121.064 83.790 1.00 41.63 C
ATOM 22 N2 G A2378 53.259 121.963 82.884 1.00 40.14 N
ATOM 23 N3 G A2378 54.489 121.441 84.755 1.00 41.86 N
ATOM 24 C4 G A2378 54.823 120.413 85.565 1.00 41.94 C
ATOM 25 P A A2379 57.013 123.295 91.667 1.00 49.48 P
ATOM 26 OP1 A A2379 55.622 122.807 91.844 1.00 51.04 O
ATOM 27 OP2 A A2379 57.408 124.617 92.214 1.00 49.25 O
ATOM 28 O5' A A2379 57.988 122.185 92.257 1.00 49.90 O
TER
ATOM 1 O3' A B1317 50.169 121.404 79.138 1.00 35.04 O
ATOM 2 P U B1318 51.291 122.559 79.131 1.00 35.33 P
ATOM 3 OP1 U B1318 51.832 122.753 77.763 1.00 34.31 O
ATOM 4 OP2 U B1318 52.201 122.186 80.226 1.00 35.92 O
ATOM 5 O5' U B1318 50.532 123.888 79.569 1.00 35.49 O
ATOM 6 C5' U B1318 49.962 124.032 80.888 1.00 38.06 C
ATOM 7 C4' U B1318 50.630 125.174 81.626 1.00 39.93 C
ATOM 8 O4' U B1318 51.980 124.799 81.972 1.00 41.02 O
ATOM 9 C3' U B1318 50.849 126.439 80.815 1.00 40.11 C
ATOM 10 O3' U B1318 49.653 127.210 80.789 1.00 38.86 O
ATOM 11 C2' U B1318 51.974 127.149 81.575 1.00 40.30 C
ATOM 12 O2' U B1318 51.526 127.961 82.640 1.00 43.86 O
ATOM 13 C1' U B1318 52.733 125.973 82.191 1.00 39.17 C
ATOM 14 N1 U B1318 54.128 125.759 81.775 1.00 37.83 N
ATOM 15 C2 U B1318 55.092 126.588 82.330 1.00 37.79 C
ATOM 16 O2 U B1318 54.828 127.493 83.106 1.00 39.36 O
ATOM 17 N3 U B1318 56.378 126.320 81.946 1.00 36.00 N
ATOM 18 C4 U B1318 56.794 125.341 81.089 1.00 35.61 C
ATOM 19 O4 U B1318 57.987 125.234 80.844 1.00 35.81 O
ATOM 20 C5 U B1318 55.748 124.532 80.547 1.00 36.74 C
ATOM 21 C6 U B1318 54.481 124.766 80.896 1.00 37.01 C
ATOM 22 P C B1319 49.354 128.170 79.545 1.00 37.77 P
ATOM 23 OP1 C B1319 50.338 129.268 79.580 1.00 41.27 O
ATOM 24 OP2 C B1319 47.917 128.489 79.558 1.00 38.47 O
ATOM 25 O5' C B1319 49.675 127.263 78.280 1.00 38.29 O
TER
Atoms:
OP1: (58.611,117.839,89.086)
OP2: (60.518,119.027,87.853)
C3': (57.130,122.202,89.275)
C1': (56.403,121.666,87.072)
C5': (59.508,121.431,88.860)
O6: (53.041,117.599,84.263)
O4': (57.758,121.339,87.226)
C8: (55.730,119.216,87.170)
C2: (53.672,121.064,83.790)
C6: (53.527,118.712,84.473)
C5: (54.416,119.102,85.502)
C4: (54.823,120.413,85.565)
P: (59.716,118.825,89.086)
C4': (58.295,122.123,88.307)
C2': (55.936,122.387,88.342)
O2': (55.762,123.736,87.997)
N1: (53.206,119.780,83.641)
N2: (53.259,121.963,82.884)
N3: (54.489,121.441,84.755)
N7: (54.994,118.357,86.520)
N9: (55.679,120.478,86.635)
O5': (59.109,120.224,89.513)
O3': (57.330,123.350,90.095)
OP2: (60.518,119.027,87.853)
C3': (57.130,122.202,89.275)
C1': (56.403,121.666,87.072)
C5': (59.508,121.431,88.860)
O6: (53.041,117.599,84.263)
O4': (57.758,121.339,87.226)
C8: (55.730,119.216,87.170)
C2: (53.672,121.064,83.790)
C6: (53.527,118.712,84.473)
C5: (54.416,119.102,85.502)
C4: (54.823,120.413,85.565)
P: (59.716,118.825,89.086)
C4': (58.295,122.123,88.307)
C2': (55.936,122.387,88.342)
O2': (55.762,123.736,87.997)
N1: (53.206,119.780,83.641)
N2: (53.259,121.963,82.884)
N3: (54.489,121.441,84.755)
N7: (54.994,118.357,86.520)
N9: (55.679,120.478,86.635)
O5': (59.109,120.224,89.513)
O3': (57.330,123.350,90.095)
C4: (56.794,125.341,81.089)
N3: (56.378,126.320,81.946)
OP1: (51.832,122.753,77.763)
OP2: (52.201,122.186,80.226)
C2: (55.092,126.588,82.330)
C1': (52.733,125.973,82.191)
C3': (50.849,126.439,80.815)
O5': (50.532,123.888,79.569)
O4': (51.980,124.799,81.972)
C5': (49.962,124.032,80.888)
P: (51.291,122.559,79.131)
C4': (50.630,125.174,81.626)
C2': (51.974,127.149,81.575)
O2': (51.526,127.961,82.640)
N1: (54.128,125.759,81.775)
O4: (57.987,125.234,80.844)
O2: (54.828,127.493,83.106)
C6: (54.481,124.766,80.896)
C5: (55.748,124.532,80.547)
O3': (49.653,127.210,80.789)
N3: (56.378,126.320,81.946)
OP1: (51.832,122.753,77.763)
OP2: (52.201,122.186,80.226)
C2: (55.092,126.588,82.330)
C1': (52.733,125.973,82.191)
C3': (50.849,126.439,80.815)
O5': (50.532,123.888,79.569)
O4': (51.980,124.799,81.972)
C5': (49.962,124.032,80.888)
P: (51.291,122.559,79.131)
C4': (50.630,125.174,81.626)
C2': (51.974,127.149,81.575)
O2': (51.526,127.961,82.640)
N1: (54.128,125.759,81.775)
O4: (57.987,125.234,80.844)
O2: (54.828,127.493,83.106)
C6: (54.481,124.766,80.896)
C5: (55.748,124.532,80.547)
O3': (49.653,127.210,80.789)
Image (generated by PyMOL):