Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 91.041 119.059 3.060 1.00 49.94 O
ATOM 2 P U A 253 89.694 118.848 3.910 1.00 50.40 P
ATOM 3 OP1 U A 253 89.959 119.356 5.282 1.00 48.67 O
ATOM 4 OP2 U A 253 89.252 117.445 3.725 1.00 50.64 O
ATOM 5 O5' U A 253 88.627 119.796 3.198 1.00 51.49 O
ATOM 6 C5' U A 253 88.448 121.170 3.609 1.00 52.26 C
ATOM 7 C4' U A 253 88.044 122.020 2.427 1.00 53.67 C
ATOM 8 O4' U A 253 89.168 122.157 1.517 1.00 53.47 O
ATOM 9 C3' U A 253 86.947 121.421 1.566 1.00 53.73 C
ATOM 10 O3' U A 253 85.649 121.651 2.090 1.00 53.90 O
ATOM 11 C2' U A 253 87.174 122.086 0.217 1.00 51.74 C
ATOM 12 O2' U A 253 86.636 123.390 0.153 1.00 51.90 O
ATOM 13 C1' U A 253 88.703 122.134 0.172 1.00 51.08 C
ATOM 14 N1 U A 253 89.312 120.976 -0.506 1.00 49.77 N
ATOM 15 C2 U A 253 89.152 120.866 -1.883 1.00 48.87 C
ATOM 16 O2 U A 253 88.533 121.680 -2.551 1.00 49.55 O
ATOM 17 N3 U A 253 89.737 119.762 -2.444 1.00 46.81 N
ATOM 18 C4 U A 253 90.445 118.775 -1.793 1.00 49.12 C
ATOM 19 O4 U A 253 90.899 117.826 -2.438 1.00 48.86 O
ATOM 20 C5 U A 253 90.578 118.966 -0.379 1.00 48.67 C
ATOM 21 C6 U A 253 90.024 120.031 0.199 1.00 47.62 C
ATOM 22 P G A 254 84.588 120.448 2.099 1.00 54.88 P
ATOM 23 OP1 G A 254 83.299 121.004 2.588 1.00 53.25 O
ATOM 24 OP2 G A 254 85.220 119.296 2.797 1.00 53.35 O
ATOM 25 O5' G A 254 84.441 120.027 0.566 1.00 56.68 O
TER
ATOM 1 O3' G B 234 93.624 117.435 -8.196 1.00 66.90 O
ATOM 2 P A B 235 94.082 118.436 -9.366 1.00 66.59 P
ATOM 3 OP1 A B 235 93.585 117.878 -10.653 1.00 68.01 O
ATOM 4 OP2 A B 235 95.534 118.691 -9.193 1.00 64.46 O
ATOM 5 O5' A B 235 93.276 119.773 -9.066 1.00 66.13 O
ATOM 6 C5' A B 235 91.873 119.887 -9.386 1.00 62.89 C
ATOM 7 C4' A B 235 91.276 121.051 -8.635 1.00 63.23 C
ATOM 8 O4' A B 235 91.158 120.705 -7.221 1.00 61.97 O
ATOM 9 C3' A B 235 92.119 122.325 -8.684 1.00 62.46 C
ATOM 10 O3' A B 235 91.275 123.473 -8.618 1.00 63.06 O
ATOM 11 C2' A B 235 92.935 122.211 -7.401 1.00 61.26 C
ATOM 12 O2' A B 235 93.472 123.424 -6.914 1.00 60.86 O
ATOM 13 C1' A B 235 91.885 121.643 -6.452 1.00 61.40 C
ATOM 14 N9 A B 235 92.446 120.980 -5.278 1.00 59.93 N
ATOM 15 C8 A B 235 93.130 119.792 -5.201 1.00 59.87 C
ATOM 16 N7 A B 235 93.543 119.500 -3.994 1.00 57.71 N
ATOM 17 C5 A B 235 93.088 120.561 -3.222 1.00 57.68 C
ATOM 18 C6 A B 235 93.205 120.853 -1.854 1.00 55.65 C
ATOM 19 N6 A B 235 93.848 120.068 -0.987 1.00 54.25 N
ATOM 20 N1 A B 235 92.635 121.990 -1.402 1.00 54.62 N
ATOM 21 C2 A B 235 91.995 122.775 -2.272 1.00 55.48 C
ATOM 22 N3 A B 235 91.820 122.612 -3.580 1.00 58.16 N
ATOM 23 C4 A B 235 92.401 121.472 -3.998 1.00 58.05 C
ATOM 24 P A B 236 90.753 124.152 -9.976 1.00 63.38 P
ATOM 25 OP1 A B 236 91.830 123.989 -10.989 1.00 65.32 O
ATOM 26 OP2 A B 236 90.250 125.510 -9.652 1.00 63.65 O
ATOM 27 O5' A B 236 89.512 123.248 -10.408 1.00 60.74 O
TER
ATOM 2 P U A 253 89.694 118.848 3.910 1.00 50.40 P
ATOM 3 OP1 U A 253 89.959 119.356 5.282 1.00 48.67 O
ATOM 4 OP2 U A 253 89.252 117.445 3.725 1.00 50.64 O
ATOM 5 O5' U A 253 88.627 119.796 3.198 1.00 51.49 O
ATOM 6 C5' U A 253 88.448 121.170 3.609 1.00 52.26 C
ATOM 7 C4' U A 253 88.044 122.020 2.427 1.00 53.67 C
ATOM 8 O4' U A 253 89.168 122.157 1.517 1.00 53.47 O
ATOM 9 C3' U A 253 86.947 121.421 1.566 1.00 53.73 C
ATOM 10 O3' U A 253 85.649 121.651 2.090 1.00 53.90 O
ATOM 11 C2' U A 253 87.174 122.086 0.217 1.00 51.74 C
ATOM 12 O2' U A 253 86.636 123.390 0.153 1.00 51.90 O
ATOM 13 C1' U A 253 88.703 122.134 0.172 1.00 51.08 C
ATOM 14 N1 U A 253 89.312 120.976 -0.506 1.00 49.77 N
ATOM 15 C2 U A 253 89.152 120.866 -1.883 1.00 48.87 C
ATOM 16 O2 U A 253 88.533 121.680 -2.551 1.00 49.55 O
ATOM 17 N3 U A 253 89.737 119.762 -2.444 1.00 46.81 N
ATOM 18 C4 U A 253 90.445 118.775 -1.793 1.00 49.12 C
ATOM 19 O4 U A 253 90.899 117.826 -2.438 1.00 48.86 O
ATOM 20 C5 U A 253 90.578 118.966 -0.379 1.00 48.67 C
ATOM 21 C6 U A 253 90.024 120.031 0.199 1.00 47.62 C
ATOM 22 P G A 254 84.588 120.448 2.099 1.00 54.88 P
ATOM 23 OP1 G A 254 83.299 121.004 2.588 1.00 53.25 O
ATOM 24 OP2 G A 254 85.220 119.296 2.797 1.00 53.35 O
ATOM 25 O5' G A 254 84.441 120.027 0.566 1.00 56.68 O
TER
ATOM 1 O3' G B 234 93.624 117.435 -8.196 1.00 66.90 O
ATOM 2 P A B 235 94.082 118.436 -9.366 1.00 66.59 P
ATOM 3 OP1 A B 235 93.585 117.878 -10.653 1.00 68.01 O
ATOM 4 OP2 A B 235 95.534 118.691 -9.193 1.00 64.46 O
ATOM 5 O5' A B 235 93.276 119.773 -9.066 1.00 66.13 O
ATOM 6 C5' A B 235 91.873 119.887 -9.386 1.00 62.89 C
ATOM 7 C4' A B 235 91.276 121.051 -8.635 1.00 63.23 C
ATOM 8 O4' A B 235 91.158 120.705 -7.221 1.00 61.97 O
ATOM 9 C3' A B 235 92.119 122.325 -8.684 1.00 62.46 C
ATOM 10 O3' A B 235 91.275 123.473 -8.618 1.00 63.06 O
ATOM 11 C2' A B 235 92.935 122.211 -7.401 1.00 61.26 C
ATOM 12 O2' A B 235 93.472 123.424 -6.914 1.00 60.86 O
ATOM 13 C1' A B 235 91.885 121.643 -6.452 1.00 61.40 C
ATOM 14 N9 A B 235 92.446 120.980 -5.278 1.00 59.93 N
ATOM 15 C8 A B 235 93.130 119.792 -5.201 1.00 59.87 C
ATOM 16 N7 A B 235 93.543 119.500 -3.994 1.00 57.71 N
ATOM 17 C5 A B 235 93.088 120.561 -3.222 1.00 57.68 C
ATOM 18 C6 A B 235 93.205 120.853 -1.854 1.00 55.65 C
ATOM 19 N6 A B 235 93.848 120.068 -0.987 1.00 54.25 N
ATOM 20 N1 A B 235 92.635 121.990 -1.402 1.00 54.62 N
ATOM 21 C2 A B 235 91.995 122.775 -2.272 1.00 55.48 C
ATOM 22 N3 A B 235 91.820 122.612 -3.580 1.00 58.16 N
ATOM 23 C4 A B 235 92.401 121.472 -3.998 1.00 58.05 C
ATOM 24 P A B 236 90.753 124.152 -9.976 1.00 63.38 P
ATOM 25 OP1 A B 236 91.830 123.989 -10.989 1.00 65.32 O
ATOM 26 OP2 A B 236 90.250 125.510 -9.652 1.00 63.65 O
ATOM 27 O5' A B 236 89.512 123.248 -10.408 1.00 60.74 O
TER
Atoms:
C4: (90.445,118.775,-1.793)
N3: (89.737,119.762,-2.444)
OP1: (89.959,119.356,5.282)
OP2: (89.252,117.445,3.725)
C2: (89.152,120.866,-1.883)
C1': (88.703,122.134,0.172)
C3': (86.947,121.421,1.566)
O5': (88.627,119.796,3.198)
O4': (89.168,122.157,1.517)
C5': (88.448,121.170,3.609)
P: (89.694,118.848,3.910)
C4': (88.044,122.020,2.427)
C2': (87.174,122.086,0.217)
O2': (86.636,123.390,0.153)
N1: (89.312,120.976,-0.506)
O4: (90.899,117.826,-2.438)
O2: (88.533,121.680,-2.551)
C6: (90.024,120.031,0.199)
C5: (90.578,118.966,-0.379)
O3': (85.649,121.651,2.090)
N3: (89.737,119.762,-2.444)
OP1: (89.959,119.356,5.282)
OP2: (89.252,117.445,3.725)
C2: (89.152,120.866,-1.883)
C1': (88.703,122.134,0.172)
C3': (86.947,121.421,1.566)
O5': (88.627,119.796,3.198)
O4': (89.168,122.157,1.517)
C5': (88.448,121.170,3.609)
P: (89.694,118.848,3.910)
C4': (88.044,122.020,2.427)
C2': (87.174,122.086,0.217)
O2': (86.636,123.390,0.153)
N1: (89.312,120.976,-0.506)
O4: (90.899,117.826,-2.438)
O2: (88.533,121.680,-2.551)
C6: (90.024,120.031,0.199)
C5: (90.578,118.966,-0.379)
O3': (85.649,121.651,2.090)
OP1: (93.585,117.878,-10.653)
OP2: (95.534,118.691,-9.193)
C3': (92.119,122.325,-8.684)
C1': (91.885,121.643,-6.452)
C5': (91.873,119.887,-9.386)
O4': (91.158,120.705,-7.221)
C8: (93.130,119.792,-5.201)
O2': (93.472,123.424,-6.914)
C6: (93.205,120.853,-1.854)
C5: (93.088,120.561,-3.222)
C4: (92.401,121.472,-3.998)
P: (94.082,118.436,-9.366)
C4': (91.276,121.051,-8.635)
C2': (92.935,122.211,-7.401)
C2: (91.995,122.775,-2.272)
N1: (92.635,121.990,-1.402)
N3: (91.820,122.612,-3.580)
N6: (93.848,120.068,-0.987)
N7: (93.543,119.500,-3.994)
N9: (92.446,120.980,-5.278)
O5': (93.276,119.773,-9.066)
O3': (91.275,123.473,-8.618)
OP2: (95.534,118.691,-9.193)
C3': (92.119,122.325,-8.684)
C1': (91.885,121.643,-6.452)
C5': (91.873,119.887,-9.386)
O4': (91.158,120.705,-7.221)
C8: (93.130,119.792,-5.201)
O2': (93.472,123.424,-6.914)
C6: (93.205,120.853,-1.854)
C5: (93.088,120.561,-3.222)
C4: (92.401,121.472,-3.998)
P: (94.082,118.436,-9.366)
C4': (91.276,121.051,-8.635)
C2': (92.935,122.211,-7.401)
C2: (91.995,122.775,-2.272)
N1: (92.635,121.990,-1.402)
N3: (91.820,122.612,-3.580)
N6: (93.848,120.068,-0.987)
N7: (93.543,119.500,-3.994)
N9: (92.446,120.980,-5.278)
O5': (93.276,119.773,-9.066)
O3': (91.275,123.473,-8.618)
Image (generated by PyMOL):