Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02378:01318
Extra
PDB:
ATOM 1 O3' C A2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 2 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 3 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 4 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 5 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
ATOM 6 C5' G A2378 59.182 121.145 88.421 1.00 40.40 C
ATOM 7 C4' G A2378 58.044 121.979 87.906 1.00 43.18 C
ATOM 8 O4' G A2378 57.463 121.312 86.768 1.00 42.62 O
ATOM 9 C3' G A2378 56.879 122.112 88.875 1.00 44.70 C
ATOM 10 O3' G A2378 57.151 123.196 89.766 1.00 48.89 O
ATOM 11 C2' G A2378 55.698 122.412 87.950 1.00 43.85 C
ATOM 12 O2' G A2378 55.584 123.787 87.643 1.00 44.20 O
ATOM 13 C1' G A2378 56.103 121.669 86.671 1.00 44.40 C
ATOM 14 N9 G A2378 55.346 120.494 86.254 1.00 45.62 N
ATOM 15 C8 G A2378 55.361 119.242 86.820 1.00 45.66 C
ATOM 16 N7 G A2378 54.642 118.373 86.160 1.00 45.85 N
ATOM 17 C5 G A2378 54.103 119.100 85.106 1.00 45.93 C
ATOM 18 C6 G A2378 53.256 118.691 84.046 1.00 45.09 C
ATOM 19 O6 G A2378 52.790 117.570 83.824 1.00 44.46 O
ATOM 20 N1 G A2378 52.959 119.748 83.191 1.00 45.12 N
ATOM 21 C2 G A2378 53.410 121.036 83.338 1.00 44.61 C
ATOM 22 N2 G A2378 53.007 121.916 82.415 1.00 43.82 N
ATOM 23 N3 G A2378 54.198 121.431 84.319 1.00 45.23 N
ATOM 24 C4 G A2378 54.508 120.416 85.161 1.00 46.07 C
ATOM 25 P A A2379 56.692 123.123 91.306 1.00 50.58 P
ATOM 26 OP1 A A2379 55.292 122.635 91.369 1.00 52.88 O
ATOM 27 OP2 A A2379 57.034 124.440 91.893 1.00 51.66 O
ATOM 28 O5' A A2379 57.609 122.000 91.964 1.00 49.49 O
TER
ATOM 1 O3' A B1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 2 P U B1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 3 OP1 U B1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 4 OP2 U B1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 5 O5' U B1318 50.220 123.696 79.182 1.00 31.91 O
ATOM 6 C5' U B1318 49.713 123.858 80.520 1.00 33.64 C
ATOM 7 C4' U B1318 50.448 124.975 81.233 1.00 34.57 C
ATOM 8 O4' U B1318 51.796 124.563 81.540 1.00 35.00 O
ATOM 9 C3' U B1318 50.687 126.250 80.443 1.00 34.84 C
ATOM 10 O3' U B1318 49.522 127.058 80.458 1.00 34.59 O
ATOM 11 C2' U B1318 51.805 126.925 81.234 1.00 34.90 C
ATOM 12 O2' U B1318 51.306 127.686 82.312 1.00 36.57 O
ATOM 13 C1' U B1318 52.563 125.721 81.803 1.00 34.45 C
ATOM 14 N1 U B1318 53.952 125.512 81.358 1.00 34.03 N
ATOM 15 C2 U B1318 54.908 126.394 81.829 1.00 33.25 C
ATOM 16 O2 U B1318 54.633 127.358 82.523 1.00 34.46 O
ATOM 17 N3 U B1318 56.195 126.107 81.457 1.00 30.79 N
ATOM 18 C4 U B1318 56.615 125.062 80.677 1.00 30.09 C
ATOM 19 O4 U B1318 57.820 124.872 80.525 1.00 28.50 O
ATOM 20 C5 U B1318 55.569 124.223 80.194 1.00 30.82 C
ATOM 21 C6 U B1318 54.307 124.469 80.540 1.00 31.99 C
ATOM 22 P C B1319 49.161 127.958 79.187 1.00 32.79 P
ATOM 23 OP1 C B1319 50.081 129.115 79.181 1.00 34.43 O
ATOM 24 OP2 C B1319 47.701 128.181 79.248 1.00 31.39 O
ATOM 25 O5' C B1319 49.501 127.038 77.934 1.00 31.37 O
TER
ATOM 2 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 3 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 4 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 5 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
ATOM 6 C5' G A2378 59.182 121.145 88.421 1.00 40.40 C
ATOM 7 C4' G A2378 58.044 121.979 87.906 1.00 43.18 C
ATOM 8 O4' G A2378 57.463 121.312 86.768 1.00 42.62 O
ATOM 9 C3' G A2378 56.879 122.112 88.875 1.00 44.70 C
ATOM 10 O3' G A2378 57.151 123.196 89.766 1.00 48.89 O
ATOM 11 C2' G A2378 55.698 122.412 87.950 1.00 43.85 C
ATOM 12 O2' G A2378 55.584 123.787 87.643 1.00 44.20 O
ATOM 13 C1' G A2378 56.103 121.669 86.671 1.00 44.40 C
ATOM 14 N9 G A2378 55.346 120.494 86.254 1.00 45.62 N
ATOM 15 C8 G A2378 55.361 119.242 86.820 1.00 45.66 C
ATOM 16 N7 G A2378 54.642 118.373 86.160 1.00 45.85 N
ATOM 17 C5 G A2378 54.103 119.100 85.106 1.00 45.93 C
ATOM 18 C6 G A2378 53.256 118.691 84.046 1.00 45.09 C
ATOM 19 O6 G A2378 52.790 117.570 83.824 1.00 44.46 O
ATOM 20 N1 G A2378 52.959 119.748 83.191 1.00 45.12 N
ATOM 21 C2 G A2378 53.410 121.036 83.338 1.00 44.61 C
ATOM 22 N2 G A2378 53.007 121.916 82.415 1.00 43.82 N
ATOM 23 N3 G A2378 54.198 121.431 84.319 1.00 45.23 N
ATOM 24 C4 G A2378 54.508 120.416 85.161 1.00 46.07 C
ATOM 25 P A A2379 56.692 123.123 91.306 1.00 50.58 P
ATOM 26 OP1 A A2379 55.292 122.635 91.369 1.00 52.88 O
ATOM 27 OP2 A A2379 57.034 124.440 91.893 1.00 51.66 O
ATOM 28 O5' A A2379 57.609 122.000 91.964 1.00 49.49 O
TER
ATOM 1 O3' A B1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 2 P U B1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 3 OP1 U B1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 4 OP2 U B1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 5 O5' U B1318 50.220 123.696 79.182 1.00 31.91 O
ATOM 6 C5' U B1318 49.713 123.858 80.520 1.00 33.64 C
ATOM 7 C4' U B1318 50.448 124.975 81.233 1.00 34.57 C
ATOM 8 O4' U B1318 51.796 124.563 81.540 1.00 35.00 O
ATOM 9 C3' U B1318 50.687 126.250 80.443 1.00 34.84 C
ATOM 10 O3' U B1318 49.522 127.058 80.458 1.00 34.59 O
ATOM 11 C2' U B1318 51.805 126.925 81.234 1.00 34.90 C
ATOM 12 O2' U B1318 51.306 127.686 82.312 1.00 36.57 O
ATOM 13 C1' U B1318 52.563 125.721 81.803 1.00 34.45 C
ATOM 14 N1 U B1318 53.952 125.512 81.358 1.00 34.03 N
ATOM 15 C2 U B1318 54.908 126.394 81.829 1.00 33.25 C
ATOM 16 O2 U B1318 54.633 127.358 82.523 1.00 34.46 O
ATOM 17 N3 U B1318 56.195 126.107 81.457 1.00 30.79 N
ATOM 18 C4 U B1318 56.615 125.062 80.677 1.00 30.09 C
ATOM 19 O4 U B1318 57.820 124.872 80.525 1.00 28.50 O
ATOM 20 C5 U B1318 55.569 124.223 80.194 1.00 30.82 C
ATOM 21 C6 U B1318 54.307 124.469 80.540 1.00 31.99 C
ATOM 22 P C B1319 49.161 127.958 79.187 1.00 32.79 P
ATOM 23 OP1 C B1319 50.081 129.115 79.181 1.00 34.43 O
ATOM 24 OP2 C B1319 47.701 128.181 79.248 1.00 31.39 O
ATOM 25 O5' C B1319 49.501 127.038 77.934 1.00 31.37 O
TER
Atoms:
OP1: (58.471,117.467,88.705)
OP2: (60.482,118.695,87.708)
C3': (56.879,122.112,88.875)
C1': (56.103,121.669,86.671)
C5': (59.182,121.145,88.421)
O6: (52.790,117.570,83.824)
O4': (57.463,121.312,86.768)
C8: (55.361,119.242,86.820)
C2: (53.410,121.036,83.338)
C6: (53.256,118.691,84.046)
C5: (54.103,119.100,85.106)
C4: (54.508,120.416,85.161)
P: (59.476,118.551,88.781)
C4': (58.044,121.979,87.906)
C2': (55.698,122.412,87.950)
O2': (55.584,123.787,87.643)
N1: (52.959,119.748,83.191)
N2: (53.007,121.916,82.415)
N3: (54.198,121.431,84.319)
N7: (54.642,118.373,86.160)
N9: (55.346,120.494,86.254)
O5': (58.668,119.910,88.923)
O3': (57.151,123.196,89.766)
OP2: (60.482,118.695,87.708)
C3': (56.879,122.112,88.875)
C1': (56.103,121.669,86.671)
C5': (59.182,121.145,88.421)
O6: (52.790,117.570,83.824)
O4': (57.463,121.312,86.768)
C8: (55.361,119.242,86.820)
C2: (53.410,121.036,83.338)
C6: (53.256,118.691,84.046)
C5: (54.103,119.100,85.106)
C4: (54.508,120.416,85.161)
P: (59.476,118.551,88.781)
C4': (58.044,121.979,87.906)
C2': (55.698,122.412,87.950)
O2': (55.584,123.787,87.643)
N1: (52.959,119.748,83.191)
N2: (53.007,121.916,82.415)
N3: (54.198,121.431,84.319)
N7: (54.642,118.373,86.160)
N9: (55.346,120.494,86.254)
O5': (58.668,119.910,88.923)
O3': (57.151,123.196,89.766)
C4: (56.615,125.062,80.677)
N3: (56.195,126.107,81.457)
OP1: (51.411,122.555,77.328)
OP2: (51.913,121.925,79.772)
C2: (54.908,126.394,81.829)
C1': (52.563,125.721,81.803)
C3': (50.687,126.250,80.443)
O5': (50.220,123.696,79.182)
O4': (51.796,124.563,81.540)
C5': (49.713,123.858,80.520)
P: (50.948,122.356,78.724)
C4': (50.448,124.975,81.233)
C2': (51.805,126.925,81.234)
O2': (51.306,127.686,82.312)
N1: (53.952,125.512,81.358)
O4: (57.820,124.872,80.525)
O2: (54.633,127.358,82.523)
C6: (54.307,124.469,80.540)
C5: (55.569,124.223,80.194)
O3': (49.522,127.058,80.458)
N3: (56.195,126.107,81.457)
OP1: (51.411,122.555,77.328)
OP2: (51.913,121.925,79.772)
C2: (54.908,126.394,81.829)
C1': (52.563,125.721,81.803)
C3': (50.687,126.250,80.443)
O5': (50.220,123.696,79.182)
O4': (51.796,124.563,81.540)
C5': (49.713,123.858,80.520)
P: (50.948,122.356,78.724)
C4': (50.448,124.975,81.233)
C2': (51.805,126.925,81.234)
O2': (51.306,127.686,82.312)
N1: (53.952,125.512,81.358)
O4: (57.820,124.872,80.525)
O2: (54.633,127.358,82.523)
C6: (54.307,124.469,80.540)
C5: (55.569,124.223,80.194)
O3': (49.522,127.058,80.458)
Image (generated by PyMOL):