Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0347:0345
Extra
PDB:
ATOM 1 O3' G A 346 58.735 123.353 8.466 1.00 64.25 O
ATOM 2 P U A 347 59.658 122.268 7.716 1.00 65.98 P
ATOM 3 OP1 U A 347 60.974 122.176 8.403 1.00 66.08 O
ATOM 4 OP2 U A 347 59.609 122.576 6.262 1.00 66.29 O
ATOM 5 O5' U A 347 58.868 120.899 7.920 1.00 64.70 O
ATOM 6 C5' U A 347 58.970 120.146 9.145 1.00 62.15 C
ATOM 7 C4' U A 347 57.632 119.537 9.498 1.00 62.07 C
ATOM 8 O4' U A 347 56.695 120.596 9.812 1.00 61.28 O
ATOM 9 C3' U A 347 56.934 118.750 8.401 1.00 63.04 C
ATOM 10 O3' U A 347 57.438 117.418 8.321 1.00 67.69 O
ATOM 11 C2' U A 347 55.477 118.785 8.851 1.00 61.73 C
ATOM 12 O2' U A 347 55.178 117.827 9.845 1.00 61.37 O
ATOM 13 C1' U A 347 55.384 120.177 9.482 1.00 60.22 C
ATOM 14 N1 U A 347 54.733 121.219 8.671 1.00 58.35 N
ATOM 15 C2 U A 347 53.366 121.111 8.460 1.00 58.26 C
ATOM 16 O2 U A 347 52.696 120.184 8.887 1.00 58.70 O
ATOM 17 N3 U A 347 52.809 122.133 7.731 1.00 57.50 N
ATOM 18 C4 U A 347 53.457 123.228 7.202 1.00 57.25 C
ATOM 19 O4 U A 347 52.800 124.099 6.629 1.00 55.56 O
ATOM 20 C5 U A 347 54.869 123.261 7.446 1.00 58.09 C
ATOM 21 C6 U A 347 55.445 122.279 8.150 1.00 57.98 C
ATOM 22 P A A 348 57.594 116.699 6.887 1.00 70.88 P
ATOM 23 OP1 A A 348 58.319 115.417 7.110 1.00 70.98 O
ATOM 24 OP2 A A 348 58.134 117.682 5.911 1.00 70.46 O
ATOM 25 O5' A A 348 56.097 116.359 6.463 1.00 70.78 O
TER
ATOM 1 O3' C B 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 2 P A B 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 3 OP1 A B 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 4 OP2 A B 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 5 O5' A B 345 54.725 121.455 13.721 1.00 55.91 O
ATOM 6 C5' A B 345 55.851 121.468 12.841 1.00 56.98 C
ATOM 7 C4' A B 345 55.901 122.777 12.108 1.00 58.35 C
ATOM 8 O4' A B 345 54.843 122.806 11.110 1.00 59.17 O
ATOM 9 C3' A B 345 55.695 124.005 12.989 1.00 58.75 C
ATOM 10 O3' A B 345 56.497 125.069 12.501 1.00 59.27 O
ATOM 11 C2' A B 345 54.212 124.309 12.793 1.00 59.29 C
ATOM 12 O2' A B 345 53.888 125.667 13.010 1.00 60.38 O
ATOM 13 C1' A B 345 54.021 123.934 11.325 1.00 59.42 C
ATOM 14 N9 A B 345 52.647 123.589 10.957 1.00 59.66 N
ATOM 15 C8 A B 345 51.898 122.509 11.362 1.00 60.03 C
ATOM 16 N7 A B 345 50.689 122.483 10.853 1.00 60.15 N
ATOM 17 C5 A B 345 50.634 123.621 10.059 1.00 59.95 C
ATOM 18 C6 A B 345 49.616 124.169 9.250 1.00 59.06 C
ATOM 19 N6 A B 345 48.407 123.626 9.107 1.00 57.94 N
ATOM 20 N1 A B 345 49.890 125.313 8.586 1.00 59.49 N
ATOM 21 C2 A B 345 51.103 125.866 8.731 1.00 60.24 C
ATOM 22 N3 A B 345 52.138 125.451 9.462 1.00 60.42 N
ATOM 23 C4 A B 345 51.835 124.311 10.110 1.00 60.28 C
ATOM 24 P G B 346 57.909 125.384 13.198 1.00 58.76 P
ATOM 25 OP1 G B 346 58.315 124.213 14.014 1.00 59.07 O
ATOM 26 OP2 G B 346 57.802 126.717 13.830 1.00 58.89 O
ATOM 27 O5' G B 346 58.919 125.474 11.971 1.00 60.24 O
TER
ATOM 2 P U A 347 59.658 122.268 7.716 1.00 65.98 P
ATOM 3 OP1 U A 347 60.974 122.176 8.403 1.00 66.08 O
ATOM 4 OP2 U A 347 59.609 122.576 6.262 1.00 66.29 O
ATOM 5 O5' U A 347 58.868 120.899 7.920 1.00 64.70 O
ATOM 6 C5' U A 347 58.970 120.146 9.145 1.00 62.15 C
ATOM 7 C4' U A 347 57.632 119.537 9.498 1.00 62.07 C
ATOM 8 O4' U A 347 56.695 120.596 9.812 1.00 61.28 O
ATOM 9 C3' U A 347 56.934 118.750 8.401 1.00 63.04 C
ATOM 10 O3' U A 347 57.438 117.418 8.321 1.00 67.69 O
ATOM 11 C2' U A 347 55.477 118.785 8.851 1.00 61.73 C
ATOM 12 O2' U A 347 55.178 117.827 9.845 1.00 61.37 O
ATOM 13 C1' U A 347 55.384 120.177 9.482 1.00 60.22 C
ATOM 14 N1 U A 347 54.733 121.219 8.671 1.00 58.35 N
ATOM 15 C2 U A 347 53.366 121.111 8.460 1.00 58.26 C
ATOM 16 O2 U A 347 52.696 120.184 8.887 1.00 58.70 O
ATOM 17 N3 U A 347 52.809 122.133 7.731 1.00 57.50 N
ATOM 18 C4 U A 347 53.457 123.228 7.202 1.00 57.25 C
ATOM 19 O4 U A 347 52.800 124.099 6.629 1.00 55.56 O
ATOM 20 C5 U A 347 54.869 123.261 7.446 1.00 58.09 C
ATOM 21 C6 U A 347 55.445 122.279 8.150 1.00 57.98 C
ATOM 22 P A A 348 57.594 116.699 6.887 1.00 70.88 P
ATOM 23 OP1 A A 348 58.319 115.417 7.110 1.00 70.98 O
ATOM 24 OP2 A A 348 58.134 117.682 5.911 1.00 70.46 O
ATOM 25 O5' A A 348 56.097 116.359 6.463 1.00 70.78 O
TER
ATOM 1 O3' C B 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 2 P A B 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 3 OP1 A B 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 4 OP2 A B 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 5 O5' A B 345 54.725 121.455 13.721 1.00 55.91 O
ATOM 6 C5' A B 345 55.851 121.468 12.841 1.00 56.98 C
ATOM 7 C4' A B 345 55.901 122.777 12.108 1.00 58.35 C
ATOM 8 O4' A B 345 54.843 122.806 11.110 1.00 59.17 O
ATOM 9 C3' A B 345 55.695 124.005 12.989 1.00 58.75 C
ATOM 10 O3' A B 345 56.497 125.069 12.501 1.00 59.27 O
ATOM 11 C2' A B 345 54.212 124.309 12.793 1.00 59.29 C
ATOM 12 O2' A B 345 53.888 125.667 13.010 1.00 60.38 O
ATOM 13 C1' A B 345 54.021 123.934 11.325 1.00 59.42 C
ATOM 14 N9 A B 345 52.647 123.589 10.957 1.00 59.66 N
ATOM 15 C8 A B 345 51.898 122.509 11.362 1.00 60.03 C
ATOM 16 N7 A B 345 50.689 122.483 10.853 1.00 60.15 N
ATOM 17 C5 A B 345 50.634 123.621 10.059 1.00 59.95 C
ATOM 18 C6 A B 345 49.616 124.169 9.250 1.00 59.06 C
ATOM 19 N6 A B 345 48.407 123.626 9.107 1.00 57.94 N
ATOM 20 N1 A B 345 49.890 125.313 8.586 1.00 59.49 N
ATOM 21 C2 A B 345 51.103 125.866 8.731 1.00 60.24 C
ATOM 22 N3 A B 345 52.138 125.451 9.462 1.00 60.42 N
ATOM 23 C4 A B 345 51.835 124.311 10.110 1.00 60.28 C
ATOM 24 P G B 346 57.909 125.384 13.198 1.00 58.76 P
ATOM 25 OP1 G B 346 58.315 124.213 14.014 1.00 59.07 O
ATOM 26 OP2 G B 346 57.802 126.717 13.830 1.00 58.89 O
ATOM 27 O5' G B 346 58.919 125.474 11.971 1.00 60.24 O
TER
Atoms:
C4: (53.457,123.228,7.202)
N3: (52.809,122.133,7.731)
OP1: (60.974,122.176,8.403)
OP2: (59.609,122.576,6.262)
C2: (53.366,121.111,8.460)
C1': (55.384,120.177,9.482)
C3': (56.934,118.750,8.401)
O5': (58.868,120.899,7.920)
O4': (56.695,120.596,9.812)
C5': (58.970,120.146,9.145)
P: (59.658,122.268,7.716)
C4': (57.632,119.537,9.498)
C2': (55.477,118.785,8.851)
O2': (55.178,117.827,9.845)
N1: (54.733,121.219,8.671)
O4: (52.800,124.099,6.629)
O2: (52.696,120.184,8.887)
C6: (55.445,122.279,8.150)
C5: (54.869,123.261,7.446)
O3': (57.438,117.418,8.321)
N3: (52.809,122.133,7.731)
OP1: (60.974,122.176,8.403)
OP2: (59.609,122.576,6.262)
C2: (53.366,121.111,8.460)
C1': (55.384,120.177,9.482)
C3': (56.934,118.750,8.401)
O5': (58.868,120.899,7.920)
O4': (56.695,120.596,9.812)
C5': (58.970,120.146,9.145)
P: (59.658,122.268,7.716)
C4': (57.632,119.537,9.498)
C2': (55.477,118.785,8.851)
O2': (55.178,117.827,9.845)
N1: (54.733,121.219,8.671)
O4: (52.800,124.099,6.629)
O2: (52.696,120.184,8.887)
C6: (55.445,122.279,8.150)
C5: (54.869,123.261,7.446)
O3': (57.438,117.418,8.321)
OP1: (53.159,119.695,12.958)
OP2: (55.063,119.157,14.601)
C3': (55.695,124.005,12.989)
C1': (54.021,123.934,11.325)
C5': (55.851,121.468,12.841)
O4': (54.843,122.806,11.110)
C8: (51.898,122.509,11.362)
O2': (53.888,125.667,13.010)
C6: (49.616,124.169,9.250)
C5: (50.634,123.621,10.059)
C4: (51.835,124.311,10.110)
P: (54.015,120.091,14.104)
C4': (55.901,122.777,12.108)
C2': (54.212,124.309,12.793)
C2: (51.103,125.866,8.731)
N1: (49.890,125.313,8.586)
N3: (52.138,125.451,9.462)
N6: (48.407,123.626,9.107)
N7: (50.689,122.483,10.853)
N9: (52.647,123.589,10.957)
O5': (54.725,121.455,13.721)
O3': (56.497,125.069,12.501)
OP2: (55.063,119.157,14.601)
C3': (55.695,124.005,12.989)
C1': (54.021,123.934,11.325)
C5': (55.851,121.468,12.841)
O4': (54.843,122.806,11.110)
C8: (51.898,122.509,11.362)
O2': (53.888,125.667,13.010)
C6: (49.616,124.169,9.250)
C5: (50.634,123.621,10.059)
C4: (51.835,124.311,10.110)
P: (54.015,120.091,14.104)
C4': (55.901,122.777,12.108)
C2': (54.212,124.309,12.793)
C2: (51.103,125.866,8.731)
N1: (49.890,125.313,8.586)
N3: (52.138,125.451,9.462)
N6: (48.407,123.626,9.107)
N7: (50.689,122.483,10.853)
N9: (52.647,123.589,10.957)
O5': (54.725,121.455,13.721)
O3': (56.497,125.069,12.501)
Image (generated by PyMOL):