Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:A59:A11
Extra
PDB:
ATOM 1 O3' U A 58 -0.581 18.600 -36.350 1.00 35.35 O
ATOM 2 P G A 59 -1.760 17.702 -35.818 1.00 49.57 P
ATOM 3 OP1 G A 59 -3.104 18.048 -36.324 1.00 49.03 O
ATOM 4 OP2 G A 59 -1.516 17.606 -34.364 1.00 50.80 O
ATOM 5 O5' G A 59 -1.287 16.368 -36.551 1.00 51.86 O
ATOM 6 C5' G A 59 -2.160 15.270 -36.888 1.00 53.98 C
ATOM 7 C4' G A 59 -1.591 14.430 -38.032 1.00 54.07 C
ATOM 8 O4' G A 59 -2.435 14.594 -39.213 1.00 56.50 O
ATOM 9 C3' G A 59 -0.158 14.775 -38.486 1.00 54.44 C
ATOM 10 O3' G A 59 0.839 14.000 -37.830 1.00 48.97 O
ATOM 11 C2' G A 59 -0.287 14.437 -39.949 1.00 56.41 C
ATOM 12 O2' G A 59 -0.367 13.045 -40.129 1.00 56.15 O
ATOM 13 C1' G A 59 -1.619 15.076 -40.279 1.00 61.42 C
ATOM 14 N9 G A 59 -1.483 16.547 -40.344 1.00 65.92 N
ATOM 15 C8 G A 59 -1.843 17.458 -39.354 1.00 68.42 C
ATOM 16 N7 G A 59 -1.584 18.710 -39.643 1.00 70.88 N
ATOM 17 C5 G A 59 -1.024 18.630 -40.911 1.00 70.56 C
ATOM 18 C6 G A 59 -0.570 19.692 -41.709 1.00 71.82 C
ATOM 19 O6 G A 59 -0.604 20.891 -41.394 1.00 74.04 O
ATOM 20 N1 G A 59 -0.063 19.235 -42.934 1.00 71.36 N
ATOM 21 C2 G A 59 -0.011 17.907 -43.316 1.00 69.23 C
ATOM 22 N2 G A 59 0.507 17.680 -44.529 1.00 69.75 N
ATOM 23 N3 G A 59 -0.440 16.884 -42.571 1.00 66.91 N
ATOM 24 C4 G A 59 -0.939 17.317 -41.374 1.00 68.10 C
ATOM 25 P C A 60 2.276 13.635 -38.427 1.00 44.74 P
ATOM 26 OP1 C A 60 2.861 14.787 -39.134 1.00 47.13 O
ATOM 27 OP2 C A 60 2.223 12.349 -39.158 1.00 43.71 O
ATOM 28 O5' C A 60 3.001 13.411 -37.018 1.00 44.71 O
TER
ATOM 1 O3' G B 10 1.798 16.580 -48.567 1.00 31.79 O
ATOM 2 P U B 11 2.084 18.137 -48.454 1.00 32.30 P
ATOM 3 OP1 U B 11 1.401 18.601 -47.233 1.00 33.02 O
ATOM 4 OP2 U B 11 1.826 18.769 -49.763 1.00 32.71 O
ATOM 5 O5' U B 11 3.627 18.150 -48.092 1.00 32.06 O
ATOM 6 C5' U B 11 3.961 18.011 -46.754 1.00 31.03 C
ATOM 7 C4' U B 11 5.451 17.893 -46.664 1.00 32.12 C
ATOM 8 O4' U B 11 5.886 16.986 -47.667 1.00 32.08 O
ATOM 9 C3' U B 11 6.218 19.155 -46.980 1.00 33.83 C
ATOM 10 O3' U B 11 6.297 19.887 -45.766 1.00 35.36 O
ATOM 11 C2' U B 11 7.577 18.637 -47.428 1.00 34.14 C
ATOM 12 O2' U B 11 8.487 18.442 -46.348 1.00 36.63 O
ATOM 13 C1' U B 11 7.220 17.290 -47.996 1.00 33.08 C
ATOM 14 N1 U B 11 7.293 17.179 -49.442 1.00 33.45 N
ATOM 15 C2 U B 11 8.384 16.546 -49.983 1.00 33.80 C
ATOM 16 O2 U B 11 9.293 16.117 -49.307 1.00 33.40 O
ATOM 17 N3 U B 11 8.377 16.433 -51.352 1.00 35.41 N
ATOM 18 C4 U B 11 7.390 16.886 -52.208 1.00 35.61 C
ATOM 19 O4 U B 11 7.530 16.713 -53.415 1.00 36.17 O
ATOM 20 C5 U B 11 6.262 17.530 -51.566 1.00 35.16 C
ATOM 21 C6 U B 11 6.248 17.643 -50.227 1.00 34.47 C
ATOM 22 P G B 12 5.831 21.401 -45.670 1.00 35.55 P
ATOM 23 OP1 G B 12 4.708 21.644 -46.628 1.00 34.33 O
ATOM 24 OP2 G B 12 7.089 22.173 -45.710 1.00 37.53 O
ATOM 25 O5' G B 12 5.233 21.458 -44.206 1.00 33.07 O
TER
ATOM 2 P G A 59 -1.760 17.702 -35.818 1.00 49.57 P
ATOM 3 OP1 G A 59 -3.104 18.048 -36.324 1.00 49.03 O
ATOM 4 OP2 G A 59 -1.516 17.606 -34.364 1.00 50.80 O
ATOM 5 O5' G A 59 -1.287 16.368 -36.551 1.00 51.86 O
ATOM 6 C5' G A 59 -2.160 15.270 -36.888 1.00 53.98 C
ATOM 7 C4' G A 59 -1.591 14.430 -38.032 1.00 54.07 C
ATOM 8 O4' G A 59 -2.435 14.594 -39.213 1.00 56.50 O
ATOM 9 C3' G A 59 -0.158 14.775 -38.486 1.00 54.44 C
ATOM 10 O3' G A 59 0.839 14.000 -37.830 1.00 48.97 O
ATOM 11 C2' G A 59 -0.287 14.437 -39.949 1.00 56.41 C
ATOM 12 O2' G A 59 -0.367 13.045 -40.129 1.00 56.15 O
ATOM 13 C1' G A 59 -1.619 15.076 -40.279 1.00 61.42 C
ATOM 14 N9 G A 59 -1.483 16.547 -40.344 1.00 65.92 N
ATOM 15 C8 G A 59 -1.843 17.458 -39.354 1.00 68.42 C
ATOM 16 N7 G A 59 -1.584 18.710 -39.643 1.00 70.88 N
ATOM 17 C5 G A 59 -1.024 18.630 -40.911 1.00 70.56 C
ATOM 18 C6 G A 59 -0.570 19.692 -41.709 1.00 71.82 C
ATOM 19 O6 G A 59 -0.604 20.891 -41.394 1.00 74.04 O
ATOM 20 N1 G A 59 -0.063 19.235 -42.934 1.00 71.36 N
ATOM 21 C2 G A 59 -0.011 17.907 -43.316 1.00 69.23 C
ATOM 22 N2 G A 59 0.507 17.680 -44.529 1.00 69.75 N
ATOM 23 N3 G A 59 -0.440 16.884 -42.571 1.00 66.91 N
ATOM 24 C4 G A 59 -0.939 17.317 -41.374 1.00 68.10 C
ATOM 25 P C A 60 2.276 13.635 -38.427 1.00 44.74 P
ATOM 26 OP1 C A 60 2.861 14.787 -39.134 1.00 47.13 O
ATOM 27 OP2 C A 60 2.223 12.349 -39.158 1.00 43.71 O
ATOM 28 O5' C A 60 3.001 13.411 -37.018 1.00 44.71 O
TER
ATOM 1 O3' G B 10 1.798 16.580 -48.567 1.00 31.79 O
ATOM 2 P U B 11 2.084 18.137 -48.454 1.00 32.30 P
ATOM 3 OP1 U B 11 1.401 18.601 -47.233 1.00 33.02 O
ATOM 4 OP2 U B 11 1.826 18.769 -49.763 1.00 32.71 O
ATOM 5 O5' U B 11 3.627 18.150 -48.092 1.00 32.06 O
ATOM 6 C5' U B 11 3.961 18.011 -46.754 1.00 31.03 C
ATOM 7 C4' U B 11 5.451 17.893 -46.664 1.00 32.12 C
ATOM 8 O4' U B 11 5.886 16.986 -47.667 1.00 32.08 O
ATOM 9 C3' U B 11 6.218 19.155 -46.980 1.00 33.83 C
ATOM 10 O3' U B 11 6.297 19.887 -45.766 1.00 35.36 O
ATOM 11 C2' U B 11 7.577 18.637 -47.428 1.00 34.14 C
ATOM 12 O2' U B 11 8.487 18.442 -46.348 1.00 36.63 O
ATOM 13 C1' U B 11 7.220 17.290 -47.996 1.00 33.08 C
ATOM 14 N1 U B 11 7.293 17.179 -49.442 1.00 33.45 N
ATOM 15 C2 U B 11 8.384 16.546 -49.983 1.00 33.80 C
ATOM 16 O2 U B 11 9.293 16.117 -49.307 1.00 33.40 O
ATOM 17 N3 U B 11 8.377 16.433 -51.352 1.00 35.41 N
ATOM 18 C4 U B 11 7.390 16.886 -52.208 1.00 35.61 C
ATOM 19 O4 U B 11 7.530 16.713 -53.415 1.00 36.17 O
ATOM 20 C5 U B 11 6.262 17.530 -51.566 1.00 35.16 C
ATOM 21 C6 U B 11 6.248 17.643 -50.227 1.00 34.47 C
ATOM 22 P G B 12 5.831 21.401 -45.670 1.00 35.55 P
ATOM 23 OP1 G B 12 4.708 21.644 -46.628 1.00 34.33 O
ATOM 24 OP2 G B 12 7.089 22.173 -45.710 1.00 37.53 O
ATOM 25 O5' G B 12 5.233 21.458 -44.206 1.00 33.07 O
TER
Atoms:
OP1: (-3.104,18.048,-36.324)
OP2: (-1.516,17.606,-34.364)
C3': (-0.158,14.775,-38.486)
C1': (-1.619,15.076,-40.279)
C5': (-2.160,15.270,-36.888)
O6: (-0.604,20.891,-41.394)
O4': (-2.435,14.594,-39.213)
C8: (-1.843,17.458,-39.354)
C2: (-0.011,17.907,-43.316)
C6: (-0.570,19.692,-41.709)
C5: (-1.024,18.630,-40.911)
C4: (-0.939,17.317,-41.374)
P: (-1.760,17.702,-35.818)
C4': (-1.591,14.430,-38.032)
C2': (-0.287,14.437,-39.949)
O2': (-0.367,13.045,-40.129)
N1: (-0.063,19.235,-42.934)
N2: (0.507,17.680,-44.529)
N3: (-0.440,16.884,-42.571)
N7: (-1.584,18.710,-39.643)
N9: (-1.483,16.547,-40.344)
O5': (-1.287,16.368,-36.551)
O3': (0.839,14.000,-37.830)
OP2: (-1.516,17.606,-34.364)
C3': (-0.158,14.775,-38.486)
C1': (-1.619,15.076,-40.279)
C5': (-2.160,15.270,-36.888)
O6: (-0.604,20.891,-41.394)
O4': (-2.435,14.594,-39.213)
C8: (-1.843,17.458,-39.354)
C2: (-0.011,17.907,-43.316)
C6: (-0.570,19.692,-41.709)
C5: (-1.024,18.630,-40.911)
C4: (-0.939,17.317,-41.374)
P: (-1.760,17.702,-35.818)
C4': (-1.591,14.430,-38.032)
C2': (-0.287,14.437,-39.949)
O2': (-0.367,13.045,-40.129)
N1: (-0.063,19.235,-42.934)
N2: (0.507,17.680,-44.529)
N3: (-0.440,16.884,-42.571)
N7: (-1.584,18.710,-39.643)
N9: (-1.483,16.547,-40.344)
O5': (-1.287,16.368,-36.551)
O3': (0.839,14.000,-37.830)
C4: (7.390,16.886,-52.208)
N3: (8.377,16.433,-51.352)
OP1: (1.401,18.601,-47.233)
OP2: (1.826,18.769,-49.763)
C2: (8.384,16.546,-49.983)
C1': (7.220,17.290,-47.996)
C3': (6.218,19.155,-46.980)
O5': (3.627,18.150,-48.092)
O4': (5.886,16.986,-47.667)
C5': (3.961,18.011,-46.754)
P: (2.084,18.137,-48.454)
C4': (5.451,17.893,-46.664)
C2': (7.577,18.637,-47.428)
O2': (8.487,18.442,-46.348)
N1: (7.293,17.179,-49.442)
O4: (7.530,16.713,-53.415)
O2: (9.293,16.117,-49.307)
C6: (6.248,17.643,-50.227)
C5: (6.262,17.530,-51.566)
O3': (6.297,19.887,-45.766)
N3: (8.377,16.433,-51.352)
OP1: (1.401,18.601,-47.233)
OP2: (1.826,18.769,-49.763)
C2: (8.384,16.546,-49.983)
C1': (7.220,17.290,-47.996)
C3': (6.218,19.155,-46.980)
O5': (3.627,18.150,-48.092)
O4': (5.886,16.986,-47.667)
C5': (3.961,18.011,-46.754)
P: (2.084,18.137,-48.454)
C4': (5.451,17.893,-46.664)
C2': (7.577,18.637,-47.428)
O2': (8.487,18.442,-46.348)
N1: (7.293,17.179,-49.442)
O4: (7.530,16.713,-53.415)
O2: (9.293,16.117,-49.307)
C6: (6.248,17.643,-50.227)
C5: (6.262,17.530,-51.566)
O3': (6.297,19.887,-45.766)
Image (generated by PyMOL):