Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01193:02012
Extra
PDB:
ATOM 1 O3' A A1192 53.188 121.785 122.879 1.00 31.16 O
ATOM 2 P U A1193 52.870 122.363 121.416 1.00 32.20 P
ATOM 3 OP1 U A1193 52.125 121.342 120.639 1.00 31.17 O
ATOM 4 OP2 U A1193 54.131 122.932 120.872 1.00 32.30 O
ATOM 5 O5' U A1193 51.880 123.567 121.714 1.00 31.50 O
ATOM 6 C5' U A1193 52.288 124.665 122.540 1.00 32.78 C
ATOM 7 C4' U A1193 51.186 125.688 122.601 1.00 33.05 C
ATOM 8 O4' U A1193 50.856 126.099 121.245 1.00 34.30 O
ATOM 9 C3' U A1193 49.878 125.213 123.215 1.00 31.46 C
ATOM 10 O3' U A1193 49.243 126.368 123.734 1.00 33.63 O
ATOM 11 C2' U A1193 49.105 124.716 121.996 1.00 33.57 C
ATOM 12 O2' U A1193 47.702 124.712 122.182 1.00 30.39 O
ATOM 13 C1' U A1193 49.512 125.760 120.956 1.00 34.30 C
ATOM 14 N1 U A1193 49.439 125.334 119.548 1.00 35.91 N
ATOM 15 C2 U A1193 48.552 126.000 118.717 1.00 36.29 C
ATOM 16 O2 U A1193 47.795 126.876 119.112 1.00 38.89 O
ATOM 17 N3 U A1193 48.576 125.598 117.407 1.00 34.60 N
ATOM 18 C4 U A1193 49.357 124.613 116.853 1.00 35.19 C
ATOM 19 O4 U A1193 49.291 124.397 115.643 1.00 34.65 O
ATOM 20 C5 U A1193 50.221 123.948 117.778 1.00 35.33 C
ATOM 21 C6 U A1193 50.235 124.322 119.060 1.00 34.87 C
ATOM 22 P G A1194 48.844 126.442 125.278 1.00 32.50 P
ATOM 23 OP1 G A1194 48.301 127.805 125.493 1.00 35.51 O
ATOM 24 OP2 G A1194 49.971 125.965 126.104 1.00 34.67 O
ATOM 25 O5' G A1194 47.659 125.394 125.414 1.00 32.62 O
TER
ATOM 1 O3' C B2011 44.518 128.358 115.836 1.00 29.38 O
ATOM 2 P C B2012 45.321 126.975 115.728 1.00 30.96 P
ATOM 3 OP1 C B2012 46.706 127.265 116.167 1.00 30.03 O
ATOM 4 OP2 C B2012 45.082 126.359 114.398 1.00 27.63 O
ATOM 5 O5' C B2012 44.622 126.040 116.806 1.00 30.41 O
ATOM 6 C5' C B2012 44.648 126.374 118.198 1.00 31.33 C
ATOM 7 C4' C B2012 43.928 125.315 118.989 1.00 32.70 C
ATOM 8 O4' C B2012 42.527 125.284 118.613 1.00 31.52 O
ATOM 9 C3' C B2012 44.428 123.901 118.754 1.00 32.69 C
ATOM 10 O3' C B2012 45.545 123.653 119.599 1.00 32.37 O
ATOM 11 C2' C B2012 43.217 123.059 119.124 1.00 33.37 C
ATOM 12 O2' C B2012 43.125 122.903 120.526 1.00 34.09 O
ATOM 13 C1' C B2012 42.063 123.946 118.632 1.00 33.36 C
ATOM 14 N1 C B2012 41.510 123.626 117.296 1.00 34.27 N
ATOM 15 C2 C B2012 40.578 122.581 117.174 1.00 33.70 C
ATOM 16 O2 C B2012 40.285 121.915 118.172 1.00 34.29 O
ATOM 17 N3 C B2012 40.023 122.328 115.966 1.00 34.24 N
ATOM 18 C4 C B2012 40.369 123.063 114.905 1.00 33.72 C
ATOM 19 N4 C B2012 39.768 122.804 113.743 1.00 31.42 N
ATOM 20 C5 C B2012 41.339 124.103 114.992 1.00 32.88 C
ATOM 21 C6 C B2012 41.880 124.348 116.192 1.00 33.52 C
ATOM 22 P A B2013 46.460 122.359 119.366 1.00 34.99 P
ATOM 23 OP1 A B2013 47.395 122.273 120.516 1.00 33.09 O
ATOM 24 OP2 A B2013 46.999 122.398 117.981 1.00 33.74 O
ATOM 25 O5' A B2013 45.433 121.147 119.453 1.00 34.50 O
TER
ATOM 2 P U A1193 52.870 122.363 121.416 1.00 32.20 P
ATOM 3 OP1 U A1193 52.125 121.342 120.639 1.00 31.17 O
ATOM 4 OP2 U A1193 54.131 122.932 120.872 1.00 32.30 O
ATOM 5 O5' U A1193 51.880 123.567 121.714 1.00 31.50 O
ATOM 6 C5' U A1193 52.288 124.665 122.540 1.00 32.78 C
ATOM 7 C4' U A1193 51.186 125.688 122.601 1.00 33.05 C
ATOM 8 O4' U A1193 50.856 126.099 121.245 1.00 34.30 O
ATOM 9 C3' U A1193 49.878 125.213 123.215 1.00 31.46 C
ATOM 10 O3' U A1193 49.243 126.368 123.734 1.00 33.63 O
ATOM 11 C2' U A1193 49.105 124.716 121.996 1.00 33.57 C
ATOM 12 O2' U A1193 47.702 124.712 122.182 1.00 30.39 O
ATOM 13 C1' U A1193 49.512 125.760 120.956 1.00 34.30 C
ATOM 14 N1 U A1193 49.439 125.334 119.548 1.00 35.91 N
ATOM 15 C2 U A1193 48.552 126.000 118.717 1.00 36.29 C
ATOM 16 O2 U A1193 47.795 126.876 119.112 1.00 38.89 O
ATOM 17 N3 U A1193 48.576 125.598 117.407 1.00 34.60 N
ATOM 18 C4 U A1193 49.357 124.613 116.853 1.00 35.19 C
ATOM 19 O4 U A1193 49.291 124.397 115.643 1.00 34.65 O
ATOM 20 C5 U A1193 50.221 123.948 117.778 1.00 35.33 C
ATOM 21 C6 U A1193 50.235 124.322 119.060 1.00 34.87 C
ATOM 22 P G A1194 48.844 126.442 125.278 1.00 32.50 P
ATOM 23 OP1 G A1194 48.301 127.805 125.493 1.00 35.51 O
ATOM 24 OP2 G A1194 49.971 125.965 126.104 1.00 34.67 O
ATOM 25 O5' G A1194 47.659 125.394 125.414 1.00 32.62 O
TER
ATOM 1 O3' C B2011 44.518 128.358 115.836 1.00 29.38 O
ATOM 2 P C B2012 45.321 126.975 115.728 1.00 30.96 P
ATOM 3 OP1 C B2012 46.706 127.265 116.167 1.00 30.03 O
ATOM 4 OP2 C B2012 45.082 126.359 114.398 1.00 27.63 O
ATOM 5 O5' C B2012 44.622 126.040 116.806 1.00 30.41 O
ATOM 6 C5' C B2012 44.648 126.374 118.198 1.00 31.33 C
ATOM 7 C4' C B2012 43.928 125.315 118.989 1.00 32.70 C
ATOM 8 O4' C B2012 42.527 125.284 118.613 1.00 31.52 O
ATOM 9 C3' C B2012 44.428 123.901 118.754 1.00 32.69 C
ATOM 10 O3' C B2012 45.545 123.653 119.599 1.00 32.37 O
ATOM 11 C2' C B2012 43.217 123.059 119.124 1.00 33.37 C
ATOM 12 O2' C B2012 43.125 122.903 120.526 1.00 34.09 O
ATOM 13 C1' C B2012 42.063 123.946 118.632 1.00 33.36 C
ATOM 14 N1 C B2012 41.510 123.626 117.296 1.00 34.27 N
ATOM 15 C2 C B2012 40.578 122.581 117.174 1.00 33.70 C
ATOM 16 O2 C B2012 40.285 121.915 118.172 1.00 34.29 O
ATOM 17 N3 C B2012 40.023 122.328 115.966 1.00 34.24 N
ATOM 18 C4 C B2012 40.369 123.063 114.905 1.00 33.72 C
ATOM 19 N4 C B2012 39.768 122.804 113.743 1.00 31.42 N
ATOM 20 C5 C B2012 41.339 124.103 114.992 1.00 32.88 C
ATOM 21 C6 C B2012 41.880 124.348 116.192 1.00 33.52 C
ATOM 22 P A B2013 46.460 122.359 119.366 1.00 34.99 P
ATOM 23 OP1 A B2013 47.395 122.273 120.516 1.00 33.09 O
ATOM 24 OP2 A B2013 46.999 122.398 117.981 1.00 33.74 O
ATOM 25 O5' A B2013 45.433 121.147 119.453 1.00 34.50 O
TER
Atoms:
C4: (49.357,124.613,116.853)
N3: (48.576,125.598,117.407)
OP1: (52.125,121.342,120.639)
OP2: (54.131,122.932,120.872)
C2: (48.552,126.000,118.717)
C1': (49.512,125.760,120.956)
C3': (49.878,125.213,123.215)
O5': (51.880,123.567,121.714)
O4': (50.856,126.099,121.245)
C5': (52.288,124.665,122.540)
P: (52.870,122.363,121.416)
C4': (51.186,125.688,122.601)
C2': (49.105,124.716,121.996)
O2': (47.702,124.712,122.182)
N1: (49.439,125.334,119.548)
O4: (49.291,124.397,115.643)
O2: (47.795,126.876,119.112)
C6: (50.235,124.322,119.060)
C5: (50.221,123.948,117.778)
O3': (49.243,126.368,123.734)
N3: (48.576,125.598,117.407)
OP1: (52.125,121.342,120.639)
OP2: (54.131,122.932,120.872)
C2: (48.552,126.000,118.717)
C1': (49.512,125.760,120.956)
C3': (49.878,125.213,123.215)
O5': (51.880,123.567,121.714)
O4': (50.856,126.099,121.245)
C5': (52.288,124.665,122.540)
P: (52.870,122.363,121.416)
C4': (51.186,125.688,122.601)
C2': (49.105,124.716,121.996)
O2': (47.702,124.712,122.182)
N1: (49.439,125.334,119.548)
O4: (49.291,124.397,115.643)
O2: (47.795,126.876,119.112)
C6: (50.235,124.322,119.060)
C5: (50.221,123.948,117.778)
O3': (49.243,126.368,123.734)
C2: (40.578,122.581,117.174)
OP1: (46.706,127.265,116.167)
OP2: (45.082,126.359,114.398)
C4: (40.369,123.063,114.905)
O5': (44.622,126.040,116.806)
C3': (44.428,123.901,118.754)
C1': (42.063,123.946,118.632)
O4': (42.527,125.284,118.613)
C5': (44.648,126.374,118.198)
P: (45.321,126.975,115.728)
O2: (40.285,121.915,118.172)
C4': (43.928,125.315,118.989)
C2': (43.217,123.059,119.124)
O2': (43.125,122.903,120.526)
N1: (41.510,123.626,117.296)
N3: (40.023,122.328,115.966)
N4: (39.768,122.804,113.743)
C6: (41.880,124.348,116.192)
C5: (41.339,124.103,114.992)
O3': (45.545,123.653,119.599)
OP1: (46.706,127.265,116.167)
OP2: (45.082,126.359,114.398)
C4: (40.369,123.063,114.905)
O5': (44.622,126.040,116.806)
C3': (44.428,123.901,118.754)
C1': (42.063,123.946,118.632)
O4': (42.527,125.284,118.613)
C5': (44.648,126.374,118.198)
P: (45.321,126.975,115.728)
O2: (40.285,121.915,118.172)
C4': (43.928,125.315,118.989)
C2': (43.217,123.059,119.124)
O2': (43.125,122.903,120.526)
N1: (41.510,123.626,117.296)
N3: (40.023,122.328,115.966)
N4: (39.768,122.804,113.743)
C6: (41.880,124.348,116.192)
C5: (41.339,124.103,114.992)
O3': (45.545,123.653,119.599)
Image (generated by PyMOL):