ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:0253:0235

Extra

PDB:
ATOM 1 O3' G A 252 91.785 119.852 3.757 1.00 69.56 O
ATOM 2 P U A 253 90.505 119.755 4.722 1.00 70.29 P
ATOM 3 OP1 U A 253 90.910 120.370 6.023 1.00 69.98 O
ATOM 4 OP2 U A 253 90.018 118.346 4.687 1.00 69.86 O
ATOM 5 O5' U A 253 89.425 120.696 4.024 1.00 69.63 O
ATOM 6 C5' U A 253 89.307 122.081 4.399 1.00 68.72 C
ATOM 7 C4' U A 253 88.886 122.908 3.218 1.00 67.05 C
ATOM 8 O4' U A 253 90.005 123.063 2.310 1.00 67.64 O
ATOM 9 C3' U A 253 87.786 122.293 2.376 1.00 68.25 C
ATOM 10 O3' U A 253 86.492 122.545 2.906 1.00 70.32 O
ATOM 11 C2' U A 253 88.009 122.941 1.018 1.00 66.68 C
ATOM 12 O2' U A 253 87.409 124.224 0.929 1.00 64.96 O
ATOM 13 C1' U A 253 89.538 123.053 0.974 1.00 66.13 C
ATOM 14 N1 U A 253 90.197 121.944 0.264 1.00 66.26 N
ATOM 15 C2 U A 253 89.895 121.774 -1.078 1.00 66.21 C
ATOM 16 O2 U A 253 89.123 122.501 -1.685 1.00 67.31 O
ATOM 17 N3 U A 253 90.529 120.718 -1.686 1.00 67.14 N
ATOM 18 C4 U A 253 91.413 119.828 -1.110 1.00 67.31 C
ATOM 19 O4 U A 253 91.848 118.885 -1.785 1.00 67.47 O
ATOM 20 C5 U A 253 91.686 120.073 0.281 1.00 66.38 C
ATOM 21 C6 U A 253 91.086 121.095 0.904 1.00 65.14 C
ATOM 22 P G A 254 85.397 121.365 2.915 1.00 72.80 P
ATOM 23 OP1 G A 254 84.090 121.980 3.301 1.00 70.86 O
ATOM 24 OP2 G A 254 85.950 120.215 3.707 1.00 71.27 O
ATOM 25 O5' G A 254 85.299 120.917 1.385 1.00 73.04 O
TER

ATOM 1 O3' G B 234 94.427 118.321 -7.572 1.00 81.09 O
ATOM 2 P A B 235 95.134 119.318 -8.611 1.00 80.56 P
ATOM 3 OP1 A B 235 94.915 118.774 -9.988 1.00 81.04 O
ATOM 4 OP2 A B 235 96.522 119.508 -8.103 1.00 79.21 O
ATOM 5 O5' A B 235 94.290 120.661 -8.456 1.00 79.27 O
ATOM 6 C5' A B 235 92.859 120.686 -8.714 1.00 77.03 C
ATOM 7 C4' A B 235 92.218 121.803 -7.928 1.00 76.96 C
ATOM 8 O4' A B 235 92.154 121.436 -6.523 1.00 77.23 O
ATOM 9 C3' A B 235 92.981 123.122 -7.994 1.00 77.51 C
ATOM 10 O3' A B 235 92.071 124.209 -7.946 1.00 78.86 O
ATOM 11 C2' A B 235 93.784 123.113 -6.698 1.00 76.63 C
ATOM 12 O2' A B 235 94.176 124.396 -6.248 1.00 75.65 O
ATOM 13 C1' A B 235 92.804 122.423 -5.748 1.00 76.54 C
ATOM 14 N9 A B 235 93.420 121.784 -4.586 1.00 76.33 N
ATOM 15 C8 A B 235 94.224 120.667 -4.531 1.00 76.65 C
ATOM 16 N7 A B 235 94.642 120.379 -3.323 1.00 76.47 N
ATOM 17 C5 A B 235 94.068 121.364 -2.529 1.00 76.18 C
ATOM 18 C6 A B 235 94.137 121.626 -1.157 1.00 76.12 C
ATOM 19 N6 A B 235 94.847 120.898 -0.296 1.00 76.63 N
ATOM 20 N1 A B 235 93.445 122.682 -0.687 1.00 76.44 N
ATOM 21 C2 A B 235 92.738 123.422 -1.549 1.00 76.31 C
ATOM 22 N3 A B 235 92.600 123.283 -2.859 1.00 75.48 N
ATOM 23 C4 A B 235 93.303 122.225 -3.292 1.00 75.81 C
ATOM 24 P A B 236 91.657 124.960 -9.296 1.00 80.40 P
ATOM 25 OP1 A B 236 92.679 124.616 -10.333 1.00 79.84 O
ATOM 26 OP2 A B 236 91.393 126.393 -8.958 1.00 79.90 O
ATOM 27 O5' A B 236 90.286 124.263 -9.732 1.00 79.70 O
TER

Atoms:
C4: (91.413,119.828,-1.110)
N3: (90.529,120.718,-1.686)
OP1: (90.910,120.370,6.023)
OP2: (90.018,118.346,4.687)
C2: (89.895,121.774,-1.078)
C1': (89.538,123.053,0.974)
C3': (87.786,122.293,2.376)
O5': (89.425,120.696,4.024)
O4': (90.005,123.063,2.310)
C5': (89.307,122.081,4.399)
P: (90.505,119.755,4.722)
C4': (88.886,122.908,3.218)
C2': (88.009,122.941,1.018)
O2': (87.409,124.224,0.929)
N1: (90.197,121.944,0.264)
O4: (91.848,118.885,-1.785)
O2: (89.123,122.501,-1.685)
C6: (91.086,121.095,0.904)
C5: (91.686,120.073,0.281)
O3': (86.492,122.545,2.906)
OP1: (94.915,118.774,-9.988)
OP2: (96.522,119.508,-8.103)
C3': (92.981,123.122,-7.994)
C1': (92.804,122.423,-5.748)
C5': (92.859,120.686,-8.714)
O4': (92.154,121.436,-6.523)
C8: (94.224,120.667,-4.531)
O2': (94.176,124.396,-6.248)
C6: (94.137,121.626,-1.157)
C5: (94.068,121.364,-2.529)
C4: (93.303,122.225,-3.292)
P: (95.134,119.318,-8.611)
C4': (92.218,121.803,-7.928)
C2': (93.784,123.113,-6.698)
C2: (92.738,123.422,-1.549)
N1: (93.445,122.682,-0.687)
N3: (92.600,123.283,-2.859)
N6: (94.847,120.898,-0.296)
N7: (94.642,120.379,-3.323)
N9: (93.420,121.784,-4.586)
O5': (94.290,120.661,-8.456)
O3': (92.071,124.209,-7.946)
Image (generated by PyMOL):
PyMOL image
show in jmol