Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01193:02012
Extra
PDB:
ATOM 1 O3' A A1192 53.351 121.547 122.767 1.00 31.67 O
ATOM 2 P U A1193 53.045 122.118 121.305 1.00 33.98 P
ATOM 3 OP1 U A1193 52.315 121.090 120.523 1.00 32.33 O
ATOM 4 OP2 U A1193 54.310 122.687 120.781 1.00 31.73 O
ATOM 5 O5' U A1193 52.044 123.321 121.584 1.00 35.04 O
ATOM 6 C5' U A1193 52.453 124.457 122.371 1.00 33.79 C
ATOM 7 C4' U A1193 51.341 125.473 122.429 1.00 32.23 C
ATOM 8 O4' U A1193 51.011 125.893 121.078 1.00 33.03 O
ATOM 9 C3' U A1193 50.033 124.987 123.037 1.00 31.13 C
ATOM 10 O3' U A1193 49.371 126.127 123.562 1.00 32.26 O
ATOM 11 C2' U A1193 49.271 124.489 121.817 1.00 32.43 C
ATOM 12 O2' U A1193 47.872 124.465 122.022 1.00 29.34 O
ATOM 13 C1' U A1193 49.669 125.550 120.787 1.00 34.05 C
ATOM 14 N1 U A1193 49.593 125.147 119.373 1.00 33.49 N
ATOM 15 C2 U A1193 48.662 125.777 118.578 1.00 33.94 C
ATOM 16 O2 U A1193 47.878 126.612 119.000 1.00 34.92 O
ATOM 17 N3 U A1193 48.676 125.397 117.264 1.00 35.07 N
ATOM 18 C4 U A1193 49.497 124.468 116.678 1.00 34.37 C
ATOM 19 O4 U A1193 49.402 124.254 115.469 1.00 35.00 O
ATOM 20 C5 U A1193 50.417 123.845 117.570 1.00 34.20 C
ATOM 21 C6 U A1193 50.432 124.195 118.854 1.00 33.16 C
ATOM 22 P G A1194 49.006 126.196 125.117 1.00 31.34 P
ATOM 23 OP1 G A1194 48.488 127.566 125.366 1.00 31.14 O
ATOM 24 OP2 G A1194 50.172 125.695 125.876 1.00 29.71 O
ATOM 25 O5' G A1194 47.812 125.156 125.286 1.00 31.61 O
TER
ATOM 1 O3' C B2011 44.712 128.105 115.786 1.00 33.36 O
ATOM 2 P C B2012 45.514 126.731 115.631 1.00 32.46 P
ATOM 3 OP1 C B2012 46.923 126.988 116.000 1.00 31.94 O
ATOM 4 OP2 C B2012 45.196 126.183 114.300 1.00 35.01 O
ATOM 5 O5' C B2012 44.848 125.774 116.709 1.00 32.59 O
ATOM 6 C5' C B2012 44.860 126.112 118.101 1.00 34.75 C
ATOM 7 C4' C B2012 44.132 125.056 118.895 1.00 35.41 C
ATOM 8 O4' C B2012 42.729 125.039 118.528 1.00 36.14 O
ATOM 9 C3' C B2012 44.619 123.640 118.656 1.00 34.32 C
ATOM 10 O3' C B2012 45.730 123.386 119.508 1.00 33.82 O
ATOM 11 C2' C B2012 43.397 122.803 119.010 1.00 35.15 C
ATOM 12 O2' C B2012 43.273 122.613 120.402 1.00 37.42 O
ATOM 13 C1' C B2012 42.254 123.704 118.532 1.00 35.94 C
ATOM 14 N1 C B2012 41.726 123.398 117.190 1.00 36.46 N
ATOM 15 C2 C B2012 40.732 122.426 117.060 1.00 35.88 C
ATOM 16 O2 C B2012 40.349 121.827 118.066 1.00 37.70 O
ATOM 17 N3 C B2012 40.215 122.166 115.838 1.00 36.08 N
ATOM 18 C4 C B2012 40.658 122.834 114.772 1.00 35.40 C
ATOM 19 N4 C B2012 40.110 122.562 113.593 1.00 34.68 N
ATOM 20 C5 C B2012 41.683 123.816 114.871 1.00 36.20 C
ATOM 21 C6 C B2012 42.186 124.064 116.085 1.00 36.45 C
ATOM 22 P A B2013 46.612 122.066 119.304 1.00 34.93 P
ATOM 23 OP1 A B2013 47.493 121.938 120.485 1.00 35.23 O
ATOM 24 OP2 A B2013 47.203 122.096 117.940 1.00 33.52 O
ATOM 25 O5' A B2013 45.549 120.885 119.359 1.00 34.94 O
TER
ATOM 2 P U A1193 53.045 122.118 121.305 1.00 33.98 P
ATOM 3 OP1 U A1193 52.315 121.090 120.523 1.00 32.33 O
ATOM 4 OP2 U A1193 54.310 122.687 120.781 1.00 31.73 O
ATOM 5 O5' U A1193 52.044 123.321 121.584 1.00 35.04 O
ATOM 6 C5' U A1193 52.453 124.457 122.371 1.00 33.79 C
ATOM 7 C4' U A1193 51.341 125.473 122.429 1.00 32.23 C
ATOM 8 O4' U A1193 51.011 125.893 121.078 1.00 33.03 O
ATOM 9 C3' U A1193 50.033 124.987 123.037 1.00 31.13 C
ATOM 10 O3' U A1193 49.371 126.127 123.562 1.00 32.26 O
ATOM 11 C2' U A1193 49.271 124.489 121.817 1.00 32.43 C
ATOM 12 O2' U A1193 47.872 124.465 122.022 1.00 29.34 O
ATOM 13 C1' U A1193 49.669 125.550 120.787 1.00 34.05 C
ATOM 14 N1 U A1193 49.593 125.147 119.373 1.00 33.49 N
ATOM 15 C2 U A1193 48.662 125.777 118.578 1.00 33.94 C
ATOM 16 O2 U A1193 47.878 126.612 119.000 1.00 34.92 O
ATOM 17 N3 U A1193 48.676 125.397 117.264 1.00 35.07 N
ATOM 18 C4 U A1193 49.497 124.468 116.678 1.00 34.37 C
ATOM 19 O4 U A1193 49.402 124.254 115.469 1.00 35.00 O
ATOM 20 C5 U A1193 50.417 123.845 117.570 1.00 34.20 C
ATOM 21 C6 U A1193 50.432 124.195 118.854 1.00 33.16 C
ATOM 22 P G A1194 49.006 126.196 125.117 1.00 31.34 P
ATOM 23 OP1 G A1194 48.488 127.566 125.366 1.00 31.14 O
ATOM 24 OP2 G A1194 50.172 125.695 125.876 1.00 29.71 O
ATOM 25 O5' G A1194 47.812 125.156 125.286 1.00 31.61 O
TER
ATOM 1 O3' C B2011 44.712 128.105 115.786 1.00 33.36 O
ATOM 2 P C B2012 45.514 126.731 115.631 1.00 32.46 P
ATOM 3 OP1 C B2012 46.923 126.988 116.000 1.00 31.94 O
ATOM 4 OP2 C B2012 45.196 126.183 114.300 1.00 35.01 O
ATOM 5 O5' C B2012 44.848 125.774 116.709 1.00 32.59 O
ATOM 6 C5' C B2012 44.860 126.112 118.101 1.00 34.75 C
ATOM 7 C4' C B2012 44.132 125.056 118.895 1.00 35.41 C
ATOM 8 O4' C B2012 42.729 125.039 118.528 1.00 36.14 O
ATOM 9 C3' C B2012 44.619 123.640 118.656 1.00 34.32 C
ATOM 10 O3' C B2012 45.730 123.386 119.508 1.00 33.82 O
ATOM 11 C2' C B2012 43.397 122.803 119.010 1.00 35.15 C
ATOM 12 O2' C B2012 43.273 122.613 120.402 1.00 37.42 O
ATOM 13 C1' C B2012 42.254 123.704 118.532 1.00 35.94 C
ATOM 14 N1 C B2012 41.726 123.398 117.190 1.00 36.46 N
ATOM 15 C2 C B2012 40.732 122.426 117.060 1.00 35.88 C
ATOM 16 O2 C B2012 40.349 121.827 118.066 1.00 37.70 O
ATOM 17 N3 C B2012 40.215 122.166 115.838 1.00 36.08 N
ATOM 18 C4 C B2012 40.658 122.834 114.772 1.00 35.40 C
ATOM 19 N4 C B2012 40.110 122.562 113.593 1.00 34.68 N
ATOM 20 C5 C B2012 41.683 123.816 114.871 1.00 36.20 C
ATOM 21 C6 C B2012 42.186 124.064 116.085 1.00 36.45 C
ATOM 22 P A B2013 46.612 122.066 119.304 1.00 34.93 P
ATOM 23 OP1 A B2013 47.493 121.938 120.485 1.00 35.23 O
ATOM 24 OP2 A B2013 47.203 122.096 117.940 1.00 33.52 O
ATOM 25 O5' A B2013 45.549 120.885 119.359 1.00 34.94 O
TER
Atoms:
C4: (49.497,124.468,116.678)
N3: (48.676,125.397,117.264)
OP1: (52.315,121.090,120.523)
OP2: (54.310,122.687,120.781)
C2: (48.662,125.777,118.578)
C1': (49.669,125.550,120.787)
C3': (50.033,124.987,123.037)
O5': (52.044,123.321,121.584)
O4': (51.011,125.893,121.078)
C5': (52.453,124.457,122.371)
P: (53.045,122.118,121.305)
C4': (51.341,125.473,122.429)
C2': (49.271,124.489,121.817)
O2': (47.872,124.465,122.022)
N1: (49.593,125.147,119.373)
O4: (49.402,124.254,115.469)
O2: (47.878,126.612,119.000)
C6: (50.432,124.195,118.854)
C5: (50.417,123.845,117.570)
O3': (49.371,126.127,123.562)
N3: (48.676,125.397,117.264)
OP1: (52.315,121.090,120.523)
OP2: (54.310,122.687,120.781)
C2: (48.662,125.777,118.578)
C1': (49.669,125.550,120.787)
C3': (50.033,124.987,123.037)
O5': (52.044,123.321,121.584)
O4': (51.011,125.893,121.078)
C5': (52.453,124.457,122.371)
P: (53.045,122.118,121.305)
C4': (51.341,125.473,122.429)
C2': (49.271,124.489,121.817)
O2': (47.872,124.465,122.022)
N1: (49.593,125.147,119.373)
O4: (49.402,124.254,115.469)
O2: (47.878,126.612,119.000)
C6: (50.432,124.195,118.854)
C5: (50.417,123.845,117.570)
O3': (49.371,126.127,123.562)
C2: (40.732,122.426,117.060)
OP1: (46.923,126.988,116.000)
OP2: (45.196,126.183,114.300)
C4: (40.658,122.834,114.772)
O5': (44.848,125.774,116.709)
C3': (44.619,123.640,118.656)
C1': (42.254,123.704,118.532)
O4': (42.729,125.039,118.528)
C5': (44.860,126.112,118.101)
P: (45.514,126.731,115.631)
O2: (40.349,121.827,118.066)
C4': (44.132,125.056,118.895)
C2': (43.397,122.803,119.010)
O2': (43.273,122.613,120.402)
N1: (41.726,123.398,117.190)
N3: (40.215,122.166,115.838)
N4: (40.110,122.562,113.593)
C6: (42.186,124.064,116.085)
C5: (41.683,123.816,114.871)
O3': (45.730,123.386,119.508)
OP1: (46.923,126.988,116.000)
OP2: (45.196,126.183,114.300)
C4: (40.658,122.834,114.772)
O5': (44.848,125.774,116.709)
C3': (44.619,123.640,118.656)
C1': (42.254,123.704,118.532)
O4': (42.729,125.039,118.528)
C5': (44.860,126.112,118.101)
P: (45.514,126.731,115.631)
O2: (40.349,121.827,118.066)
C4': (44.132,125.056,118.895)
C2': (43.397,122.803,119.010)
O2': (43.273,122.613,120.402)
N1: (41.726,123.398,117.190)
N3: (40.215,122.166,115.838)
N4: (40.110,122.562,113.593)
C6: (42.186,124.064,116.085)
C5: (41.683,123.816,114.871)
O3': (45.730,123.386,119.508)
Image (generated by PyMOL):