Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLJ:B5:B8
Extra
PDB:
ATOM 1 O3' C A 4 -18.333 -3.505 -51.784 1.00 87.82 O
ATOM 2 P G A 5 -18.960 -4.004 -53.173 1.00 90.85 P
ATOM 3 OP1 G A 5 -17.793 -4.117 -54.082 1.00 96.62 O
ATOM 4 OP2 G A 5 -20.060 -3.067 -53.511 1.00 91.34 O
ATOM 5 O5' G A 5 -19.561 -5.444 -52.856 1.00 75.89 O
ATOM 6 C5' G A 5 -18.717 -6.564 -52.637 1.00 94.18 C
ATOM 7 C4' G A 5 -19.467 -7.703 -51.992 1.00 95.15 C
ATOM 8 O4' G A 5 -20.011 -7.273 -50.717 1.00 96.94 O
ATOM 9 C3' G A 5 -20.679 -8.216 -52.752 1.00 97.06 C
ATOM 10 O3' G A 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 11 C2' G A 5 -21.502 -8.867 -51.648 1.00 96.62 C
ATOM 12 O2' G A 5 -20.949 -10.123 -51.282 1.00 91.49 O
ATOM 13 C1' G A 5 -21.265 -7.885 -50.502 1.00 98.73 C
ATOM 14 N9 G A 5 -22.295 -6.831 -50.468 1.00101.67 N
ATOM 15 C8 G A 5 -22.190 -5.530 -50.902 1.00101.80 C
ATOM 16 N7 G A 5 -23.289 -4.846 -50.733 1.00102.37 N
ATOM 17 C5 G A 5 -24.171 -5.750 -50.155 1.00102.36 C
ATOM 18 C6 G A 5 -25.519 -5.599 -49.738 1.00101.00 C
ATOM 19 O6 G A 5 -26.233 -4.594 -49.801 1.00 95.69 O
ATOM 20 N1 G A 5 -26.027 -6.779 -49.202 1.00104.65 N
ATOM 21 C2 G A 5 -25.327 -7.953 -49.083 1.00104.09 C
ATOM 22 N2 G A 5 -25.976 -8.989 -48.544 1.00103.27 N
ATOM 23 N3 G A 5 -24.075 -8.106 -49.466 1.00105.40 N
ATOM 24 C4 G A 5 -23.568 -6.975 -49.986 1.00103.69 C
ATOM 25 P U A 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 26 OP1 U A 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 27 OP2 U A 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 28 O5' U A 6 -22.358 -9.192 -55.224 1.00109.20 O
TER
ATOM 1 O3' A B 7 -29.214 -10.410 -49.712 1.00128.94 O
ATOM 2 P U B 8 -29.262 -9.892 -48.192 1.00118.77 P
ATOM 3 OP1 U B 8 -29.920 -8.561 -48.192 1.00117.01 O
ATOM 4 OP2 U B 8 -27.914 -10.033 -47.594 1.00116.80 O
ATOM 5 O5' U B 8 -30.226 -10.986 -47.576 1.00119.68 O
ATOM 6 C5' U B 8 -31.509 -10.646 -47.078 1.00118.94 C
ATOM 7 C4' U B 8 -32.417 -11.846 -47.114 1.00118.33 C
ATOM 8 O4' U B 8 -33.498 -11.609 -48.051 1.00119.43 O
ATOM 9 C3' U B 8 -31.755 -13.124 -47.604 1.00117.31 C
ATOM 10 O3' U B 8 -31.061 -13.807 -46.576 1.00117.62 O
ATOM 11 C2' U B 8 -32.911 -13.913 -48.203 1.00122.15 C
ATOM 12 O2' U B 8 -33.636 -14.600 -47.194 1.00123.10 O
ATOM 13 C1' U B 8 -33.790 -12.792 -48.761 1.00124.80 C
ATOM 14 N1 U B 8 -33.593 -12.556 -50.211 1.00127.47 N
ATOM 15 C2 U B 8 -32.729 -11.558 -50.647 1.00126.99 C
ATOM 16 O2 U B 8 -32.092 -10.826 -49.908 1.00126.82 O
ATOM 17 N3 U B 8 -32.632 -11.434 -52.011 1.00126.21 N
ATOM 18 C4 U B 8 -33.289 -12.185 -52.964 1.00131.92 C
ATOM 19 O4 U B 8 -33.096 -11.953 -54.161 1.00133.93 O
ATOM 20 C5 U B 8 -34.158 -13.192 -52.434 1.00134.61 C
ATOM 21 C6 U B 8 -34.276 -13.339 -51.112 1.00131.44 C
ATOM 22 P A B 9 -30.138 -15.072 -46.917 1.00141.98 P
ATOM 23 OP1 A B 9 -31.022 -16.260 -46.989 1.00144.94 O
ATOM 24 OP2 A B 9 -29.355 -14.673 -48.110 1.00139.89 O
ATOM 25 O5' A B 9 -29.189 -15.175 -45.641 1.00144.99 O
TER
ATOM 2 P G A 5 -18.960 -4.004 -53.173 1.00 90.85 P
ATOM 3 OP1 G A 5 -17.793 -4.117 -54.082 1.00 96.62 O
ATOM 4 OP2 G A 5 -20.060 -3.067 -53.511 1.00 91.34 O
ATOM 5 O5' G A 5 -19.561 -5.444 -52.856 1.00 75.89 O
ATOM 6 C5' G A 5 -18.717 -6.564 -52.637 1.00 94.18 C
ATOM 7 C4' G A 5 -19.467 -7.703 -51.992 1.00 95.15 C
ATOM 8 O4' G A 5 -20.011 -7.273 -50.717 1.00 96.94 O
ATOM 9 C3' G A 5 -20.679 -8.216 -52.752 1.00 97.06 C
ATOM 10 O3' G A 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 11 C2' G A 5 -21.502 -8.867 -51.648 1.00 96.62 C
ATOM 12 O2' G A 5 -20.949 -10.123 -51.282 1.00 91.49 O
ATOM 13 C1' G A 5 -21.265 -7.885 -50.502 1.00 98.73 C
ATOM 14 N9 G A 5 -22.295 -6.831 -50.468 1.00101.67 N
ATOM 15 C8 G A 5 -22.190 -5.530 -50.902 1.00101.80 C
ATOM 16 N7 G A 5 -23.289 -4.846 -50.733 1.00102.37 N
ATOM 17 C5 G A 5 -24.171 -5.750 -50.155 1.00102.36 C
ATOM 18 C6 G A 5 -25.519 -5.599 -49.738 1.00101.00 C
ATOM 19 O6 G A 5 -26.233 -4.594 -49.801 1.00 95.69 O
ATOM 20 N1 G A 5 -26.027 -6.779 -49.202 1.00104.65 N
ATOM 21 C2 G A 5 -25.327 -7.953 -49.083 1.00104.09 C
ATOM 22 N2 G A 5 -25.976 -8.989 -48.544 1.00103.27 N
ATOM 23 N3 G A 5 -24.075 -8.106 -49.466 1.00105.40 N
ATOM 24 C4 G A 5 -23.568 -6.975 -49.986 1.00103.69 C
ATOM 25 P U A 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 26 OP1 U A 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 27 OP2 U A 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 28 O5' U A 6 -22.358 -9.192 -55.224 1.00109.20 O
TER
ATOM 1 O3' A B 7 -29.214 -10.410 -49.712 1.00128.94 O
ATOM 2 P U B 8 -29.262 -9.892 -48.192 1.00118.77 P
ATOM 3 OP1 U B 8 -29.920 -8.561 -48.192 1.00117.01 O
ATOM 4 OP2 U B 8 -27.914 -10.033 -47.594 1.00116.80 O
ATOM 5 O5' U B 8 -30.226 -10.986 -47.576 1.00119.68 O
ATOM 6 C5' U B 8 -31.509 -10.646 -47.078 1.00118.94 C
ATOM 7 C4' U B 8 -32.417 -11.846 -47.114 1.00118.33 C
ATOM 8 O4' U B 8 -33.498 -11.609 -48.051 1.00119.43 O
ATOM 9 C3' U B 8 -31.755 -13.124 -47.604 1.00117.31 C
ATOM 10 O3' U B 8 -31.061 -13.807 -46.576 1.00117.62 O
ATOM 11 C2' U B 8 -32.911 -13.913 -48.203 1.00122.15 C
ATOM 12 O2' U B 8 -33.636 -14.600 -47.194 1.00123.10 O
ATOM 13 C1' U B 8 -33.790 -12.792 -48.761 1.00124.80 C
ATOM 14 N1 U B 8 -33.593 -12.556 -50.211 1.00127.47 N
ATOM 15 C2 U B 8 -32.729 -11.558 -50.647 1.00126.99 C
ATOM 16 O2 U B 8 -32.092 -10.826 -49.908 1.00126.82 O
ATOM 17 N3 U B 8 -32.632 -11.434 -52.011 1.00126.21 N
ATOM 18 C4 U B 8 -33.289 -12.185 -52.964 1.00131.92 C
ATOM 19 O4 U B 8 -33.096 -11.953 -54.161 1.00133.93 O
ATOM 20 C5 U B 8 -34.158 -13.192 -52.434 1.00134.61 C
ATOM 21 C6 U B 8 -34.276 -13.339 -51.112 1.00131.44 C
ATOM 22 P A B 9 -30.138 -15.072 -46.917 1.00141.98 P
ATOM 23 OP1 A B 9 -31.022 -16.260 -46.989 1.00144.94 O
ATOM 24 OP2 A B 9 -29.355 -14.673 -48.110 1.00139.89 O
ATOM 25 O5' A B 9 -29.189 -15.175 -45.641 1.00144.99 O
TER
Atoms:
OP1: (-17.793,-4.117,-54.082)
OP2: (-20.060,-3.067,-53.511)
C3': (-20.679,-8.216,-52.752)
C1': (-21.265,-7.885,-50.502)
C5': (-18.717,-6.564,-52.637)
O6: (-26.233,-4.594,-49.801)
O4': (-20.011,-7.273,-50.717)
C8: (-22.190,-5.530,-50.902)
C2: (-25.327,-7.953,-49.083)
C6: (-25.519,-5.599,-49.738)
C5: (-24.171,-5.750,-50.155)
C4: (-23.568,-6.975,-49.986)
P: (-18.960,-4.004,-53.173)
C4': (-19.467,-7.703,-51.992)
C2': (-21.502,-8.867,-51.648)
O2': (-20.949,-10.123,-51.282)
N1: (-26.027,-6.779,-49.202)
N2: (-25.976,-8.989,-48.544)
N3: (-24.075,-8.106,-49.466)
N7: (-23.289,-4.846,-50.733)
N9: (-22.295,-6.831,-50.468)
O5': (-19.561,-5.444,-52.856)
O3': (-20.336,-9.092,-53.810)
OP2: (-20.060,-3.067,-53.511)
C3': (-20.679,-8.216,-52.752)
C1': (-21.265,-7.885,-50.502)
C5': (-18.717,-6.564,-52.637)
O6: (-26.233,-4.594,-49.801)
O4': (-20.011,-7.273,-50.717)
C8: (-22.190,-5.530,-50.902)
C2: (-25.327,-7.953,-49.083)
C6: (-25.519,-5.599,-49.738)
C5: (-24.171,-5.750,-50.155)
C4: (-23.568,-6.975,-49.986)
P: (-18.960,-4.004,-53.173)
C4': (-19.467,-7.703,-51.992)
C2': (-21.502,-8.867,-51.648)
O2': (-20.949,-10.123,-51.282)
N1: (-26.027,-6.779,-49.202)
N2: (-25.976,-8.989,-48.544)
N3: (-24.075,-8.106,-49.466)
N7: (-23.289,-4.846,-50.733)
N9: (-22.295,-6.831,-50.468)
O5': (-19.561,-5.444,-52.856)
O3': (-20.336,-9.092,-53.810)
C4: (-33.289,-12.185,-52.964)
N3: (-32.632,-11.434,-52.011)
OP1: (-29.920,-8.561,-48.192)
OP2: (-27.914,-10.033,-47.594)
C2: (-32.729,-11.558,-50.647)
C1': (-33.790,-12.792,-48.761)
C3': (-31.755,-13.124,-47.604)
O5': (-30.226,-10.986,-47.576)
O4': (-33.498,-11.609,-48.051)
C5': (-31.509,-10.646,-47.078)
P: (-29.262,-9.892,-48.192)
C4': (-32.417,-11.846,-47.114)
C2': (-32.911,-13.913,-48.203)
O2': (-33.636,-14.600,-47.194)
N1: (-33.593,-12.556,-50.211)
O4: (-33.096,-11.953,-54.161)
O2: (-32.092,-10.826,-49.908)
C6: (-34.276,-13.339,-51.112)
C5: (-34.158,-13.192,-52.434)
O3': (-31.061,-13.807,-46.576)
N3: (-32.632,-11.434,-52.011)
OP1: (-29.920,-8.561,-48.192)
OP2: (-27.914,-10.033,-47.594)
C2: (-32.729,-11.558,-50.647)
C1': (-33.790,-12.792,-48.761)
C3': (-31.755,-13.124,-47.604)
O5': (-30.226,-10.986,-47.576)
O4': (-33.498,-11.609,-48.051)
C5': (-31.509,-10.646,-47.078)
P: (-29.262,-9.892,-48.192)
C4': (-32.417,-11.846,-47.114)
C2': (-32.911,-13.913,-48.203)
O2': (-33.636,-14.600,-47.194)
N1: (-33.593,-12.556,-50.211)
O4: (-33.096,-11.953,-54.161)
O2: (-32.092,-10.826,-49.908)
C6: (-34.276,-13.339,-51.112)
C5: (-34.158,-13.192,-52.434)
O3': (-31.061,-13.807,-46.576)
Image (generated by PyMOL):