Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLK:D5:D8
Extra
PDB:
ATOM 1 O3' C A 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 2 P G A 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 3 OP1 G A 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 4 OP2 G A 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 5 O5' G A 5 9.441 0.167 -18.849 1.00 47.45 O
ATOM 6 C5' G A 5 9.714 1.552 -18.967 1.00 45.81 C
ATOM 7 C4' G A 5 11.166 1.825 -18.682 1.00 42.33 C
ATOM 8 O4' G A 5 11.404 1.706 -17.255 1.00 34.76 O
ATOM 9 C3' G A 5 12.149 0.852 -19.310 1.00 42.56 C
ATOM 10 O3' G A 5 12.424 1.138 -20.674 1.00 45.93 O
ATOM 11 C2' G A 5 13.363 0.964 -18.393 1.00 40.08 C
ATOM 12 O2' G A 5 14.182 2.081 -18.729 1.00 36.66 O
ATOM 13 C1' G A 5 12.693 1.176 -17.025 1.00 38.21 C
ATOM 14 N9 G A 5 12.578 -0.132 -16.349 1.00 32.47 N
ATOM 15 C8 G A 5 11.555 -1.045 -16.472 1.00 33.91 C
ATOM 16 N7 G A 5 11.771 -2.148 -15.797 1.00 30.85 N
ATOM 17 C5 G A 5 13.015 -1.952 -15.210 1.00 31.20 C
ATOM 18 C6 G A 5 13.769 -2.804 -14.370 1.00 35.21 C
ATOM 19 O6 G A 5 13.474 -3.941 -13.967 1.00 30.81 O
ATOM 20 N1 G A 5 14.978 -2.216 -14.008 1.00 37.16 N
ATOM 21 C2 G A 5 15.409 -0.964 -14.398 1.00 40.08 C
ATOM 22 N2 G A 5 16.610 -0.569 -13.943 1.00 38.80 N
ATOM 23 N3 G A 5 14.710 -0.162 -15.183 1.00 29.49 N
ATOM 24 C4 G A 5 13.533 -0.714 -15.550 1.00 31.22 C
ATOM 25 P U A 6 12.585 -0.014 -21.793 1.00 46.92 P
ATOM 26 OP1 U A 6 11.403 -0.916 -21.820 1.00 44.87 O
ATOM 27 OP2 U A 6 12.955 0.738 -23.021 1.00 49.40 O
ATOM 28 O5' U A 6 13.846 -0.843 -21.314 1.00 42.75 O
TER
ATOM 1 O3' A B 7 19.412 -2.754 -14.858 1.00 35.13 O
ATOM 2 P U B 8 19.640 -2.252 -13.350 1.00 44.18 P
ATOM 3 OP1 U B 8 18.388 -2.522 -12.601 1.00 48.42 O
ATOM 4 OP2 U B 8 20.157 -0.856 -13.393 1.00 49.87 O
ATOM 5 O5' U B 8 20.779 -3.243 -12.884 1.00 48.93 O
ATOM 6 C5' U B 8 21.640 -2.859 -11.826 1.00 52.15 C
ATOM 7 C4' U B 8 23.075 -2.932 -12.270 1.00 51.35 C
ATOM 8 O4' U B 8 23.346 -4.271 -12.758 1.00 51.91 O
ATOM 9 C3' U B 8 23.457 -2.024 -13.432 1.00 56.86 C
ATOM 10 O3' U B 8 23.727 -0.690 -13.029 1.00 59.02 O
ATOM 11 C2' U B 8 24.664 -2.743 -14.016 1.00 59.03 C
ATOM 12 O2' U B 8 25.813 -2.504 -13.217 1.00 63.24 O
ATOM 13 C1' U B 8 24.262 -4.207 -13.830 1.00 55.90 C
ATOM 14 N1 U B 8 23.660 -4.787 -15.050 1.00 55.07 N
ATOM 15 C2 U B 8 24.539 -5.213 -16.029 1.00 56.53 C
ATOM 16 O2 U B 8 25.748 -5.116 -15.904 1.00 56.49 O
ATOM 17 N3 U B 8 23.951 -5.748 -17.152 1.00 56.29 N
ATOM 18 C4 U B 8 22.596 -5.892 -17.376 1.00 55.61 C
ATOM 19 O4 U B 8 22.213 -6.389 -18.433 1.00 56.75 O
ATOM 20 C5 U B 8 21.753 -5.429 -16.310 1.00 54.51 C
ATOM 21 C6 U B 8 22.299 -4.906 -15.207 1.00 53.36 C
ATOM 22 P A B 9 23.528 0.571 -14.016 1.00 82.05 P
ATOM 23 OP1 A B 9 22.915 0.118 -15.281 1.00 81.29 O
ATOM 24 OP2 A B 9 24.829 1.269 -14.048 1.00 83.89 O
ATOM 25 O5' A B 9 22.462 1.515 -13.259 1.00 71.33 O
TER
ATOM 2 P G A 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 3 OP1 G A 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 4 OP2 G A 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 5 O5' G A 5 9.441 0.167 -18.849 1.00 47.45 O
ATOM 6 C5' G A 5 9.714 1.552 -18.967 1.00 45.81 C
ATOM 7 C4' G A 5 11.166 1.825 -18.682 1.00 42.33 C
ATOM 8 O4' G A 5 11.404 1.706 -17.255 1.00 34.76 O
ATOM 9 C3' G A 5 12.149 0.852 -19.310 1.00 42.56 C
ATOM 10 O3' G A 5 12.424 1.138 -20.674 1.00 45.93 O
ATOM 11 C2' G A 5 13.363 0.964 -18.393 1.00 40.08 C
ATOM 12 O2' G A 5 14.182 2.081 -18.729 1.00 36.66 O
ATOM 13 C1' G A 5 12.693 1.176 -17.025 1.00 38.21 C
ATOM 14 N9 G A 5 12.578 -0.132 -16.349 1.00 32.47 N
ATOM 15 C8 G A 5 11.555 -1.045 -16.472 1.00 33.91 C
ATOM 16 N7 G A 5 11.771 -2.148 -15.797 1.00 30.85 N
ATOM 17 C5 G A 5 13.015 -1.952 -15.210 1.00 31.20 C
ATOM 18 C6 G A 5 13.769 -2.804 -14.370 1.00 35.21 C
ATOM 19 O6 G A 5 13.474 -3.941 -13.967 1.00 30.81 O
ATOM 20 N1 G A 5 14.978 -2.216 -14.008 1.00 37.16 N
ATOM 21 C2 G A 5 15.409 -0.964 -14.398 1.00 40.08 C
ATOM 22 N2 G A 5 16.610 -0.569 -13.943 1.00 38.80 N
ATOM 23 N3 G A 5 14.710 -0.162 -15.183 1.00 29.49 N
ATOM 24 C4 G A 5 13.533 -0.714 -15.550 1.00 31.22 C
ATOM 25 P U A 6 12.585 -0.014 -21.793 1.00 46.92 P
ATOM 26 OP1 U A 6 11.403 -0.916 -21.820 1.00 44.87 O
ATOM 27 OP2 U A 6 12.955 0.738 -23.021 1.00 49.40 O
ATOM 28 O5' U A 6 13.846 -0.843 -21.314 1.00 42.75 O
TER
ATOM 1 O3' A B 7 19.412 -2.754 -14.858 1.00 35.13 O
ATOM 2 P U B 8 19.640 -2.252 -13.350 1.00 44.18 P
ATOM 3 OP1 U B 8 18.388 -2.522 -12.601 1.00 48.42 O
ATOM 4 OP2 U B 8 20.157 -0.856 -13.393 1.00 49.87 O
ATOM 5 O5' U B 8 20.779 -3.243 -12.884 1.00 48.93 O
ATOM 6 C5' U B 8 21.640 -2.859 -11.826 1.00 52.15 C
ATOM 7 C4' U B 8 23.075 -2.932 -12.270 1.00 51.35 C
ATOM 8 O4' U B 8 23.346 -4.271 -12.758 1.00 51.91 O
ATOM 9 C3' U B 8 23.457 -2.024 -13.432 1.00 56.86 C
ATOM 10 O3' U B 8 23.727 -0.690 -13.029 1.00 59.02 O
ATOM 11 C2' U B 8 24.664 -2.743 -14.016 1.00 59.03 C
ATOM 12 O2' U B 8 25.813 -2.504 -13.217 1.00 63.24 O
ATOM 13 C1' U B 8 24.262 -4.207 -13.830 1.00 55.90 C
ATOM 14 N1 U B 8 23.660 -4.787 -15.050 1.00 55.07 N
ATOM 15 C2 U B 8 24.539 -5.213 -16.029 1.00 56.53 C
ATOM 16 O2 U B 8 25.748 -5.116 -15.904 1.00 56.49 O
ATOM 17 N3 U B 8 23.951 -5.748 -17.152 1.00 56.29 N
ATOM 18 C4 U B 8 22.596 -5.892 -17.376 1.00 55.61 C
ATOM 19 O4 U B 8 22.213 -6.389 -18.433 1.00 56.75 O
ATOM 20 C5 U B 8 21.753 -5.429 -16.310 1.00 54.51 C
ATOM 21 C6 U B 8 22.299 -4.906 -15.207 1.00 53.36 C
ATOM 22 P A B 9 23.528 0.571 -14.016 1.00 82.05 P
ATOM 23 OP1 A B 9 22.915 0.118 -15.281 1.00 81.29 O
ATOM 24 OP2 A B 9 24.829 1.269 -14.048 1.00 83.89 O
ATOM 25 O5' A B 9 22.462 1.515 -13.259 1.00 71.33 O
TER
Atoms:
OP1: (7.283,0.230,-20.106)
OP2: (7.956,-1.839,-18.777)
C3': (12.149,0.852,-19.310)
C1': (12.693,1.176,-17.025)
C5': (9.714,1.552,-18.967)
O6: (13.474,-3.941,-13.967)
O4': (11.404,1.706,-17.255)
C8: (11.555,-1.045,-16.472)
C2: (15.409,-0.964,-14.398)
C6: (13.769,-2.804,-14.370)
C5: (13.015,-1.952,-15.210)
C4: (13.533,-0.714,-15.550)
P: (7.948,-0.368,-18.924)
C4': (11.166,1.825,-18.682)
C2': (13.363,0.964,-18.393)
O2': (14.182,2.081,-18.729)
N1: (14.978,-2.216,-14.008)
N2: (16.610,-0.569,-13.943)
N3: (14.710,-0.162,-15.183)
N7: (11.771,-2.148,-15.797)
N9: (12.578,-0.132,-16.349)
O5': (9.441,0.167,-18.849)
O3': (12.424,1.138,-20.674)
OP2: (7.956,-1.839,-18.777)
C3': (12.149,0.852,-19.310)
C1': (12.693,1.176,-17.025)
C5': (9.714,1.552,-18.967)
O6: (13.474,-3.941,-13.967)
O4': (11.404,1.706,-17.255)
C8: (11.555,-1.045,-16.472)
C2: (15.409,-0.964,-14.398)
C6: (13.769,-2.804,-14.370)
C5: (13.015,-1.952,-15.210)
C4: (13.533,-0.714,-15.550)
P: (7.948,-0.368,-18.924)
C4': (11.166,1.825,-18.682)
C2': (13.363,0.964,-18.393)
O2': (14.182,2.081,-18.729)
N1: (14.978,-2.216,-14.008)
N2: (16.610,-0.569,-13.943)
N3: (14.710,-0.162,-15.183)
N7: (11.771,-2.148,-15.797)
N9: (12.578,-0.132,-16.349)
O5': (9.441,0.167,-18.849)
O3': (12.424,1.138,-20.674)
C4: (22.596,-5.892,-17.376)
N3: (23.951,-5.748,-17.152)
OP1: (18.388,-2.522,-12.601)
OP2: (20.157,-0.856,-13.393)
C2: (24.539,-5.213,-16.029)
C1': (24.262,-4.207,-13.830)
C3': (23.457,-2.024,-13.432)
O5': (20.779,-3.243,-12.884)
O4': (23.346,-4.271,-12.758)
C5': (21.640,-2.859,-11.826)
P: (19.640,-2.252,-13.350)
C4': (23.075,-2.932,-12.270)
C2': (24.664,-2.743,-14.016)
O2': (25.813,-2.504,-13.217)
N1: (23.660,-4.787,-15.050)
O4: (22.213,-6.389,-18.433)
O2: (25.748,-5.116,-15.904)
C6: (22.299,-4.906,-15.207)
C5: (21.753,-5.429,-16.310)
O3': (23.727,-0.690,-13.029)
N3: (23.951,-5.748,-17.152)
OP1: (18.388,-2.522,-12.601)
OP2: (20.157,-0.856,-13.393)
C2: (24.539,-5.213,-16.029)
C1': (24.262,-4.207,-13.830)
C3': (23.457,-2.024,-13.432)
O5': (20.779,-3.243,-12.884)
O4': (23.346,-4.271,-12.758)
C5': (21.640,-2.859,-11.826)
P: (19.640,-2.252,-13.350)
C4': (23.075,-2.932,-12.270)
C2': (24.664,-2.743,-14.016)
O2': (25.813,-2.504,-13.217)
N1: (23.660,-4.787,-15.050)
O4: (22.213,-6.389,-18.433)
O2: (25.748,-5.116,-15.904)
C6: (22.299,-4.906,-15.207)
C5: (21.753,-5.429,-16.310)
O3': (23.727,-0.690,-13.029)
Image (generated by PyMOL):