Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01193:02012
Extra
PDB:
ATOM 1 O3' A A1192 53.354 121.923 123.216 1.00 41.86 O
ATOM 2 P U A1193 53.036 122.484 121.747 1.00 42.53 P
ATOM 3 OP1 U A1193 52.317 121.420 121.006 1.00 41.16 O
ATOM 4 OP2 U A1193 54.260 123.092 121.168 1.00 40.32 O
ATOM 5 O5' U A1193 52.019 123.670 122.038 1.00 44.33 O
ATOM 6 C5' U A1193 52.379 124.753 122.917 1.00 44.94 C
ATOM 7 C4' U A1193 51.270 125.775 122.954 1.00 44.67 C
ATOM 8 O4' U A1193 50.996 126.220 121.597 1.00 46.54 O
ATOM 9 C3' U A1193 49.933 125.286 123.499 1.00 44.08 C
ATOM 10 O3' U A1193 49.252 126.428 123.996 1.00 44.20 O
ATOM 11 C2' U A1193 49.223 124.815 122.237 1.00 45.78 C
ATOM 12 O2' U A1193 47.814 124.766 122.363 1.00 45.38 O
ATOM 13 C1' U A1193 49.658 125.906 121.259 1.00 47.04 C
ATOM 14 N1 U A1193 49.604 125.556 119.832 1.00 47.50 N
ATOM 15 C2 U A1193 48.717 126.252 119.047 1.00 48.62 C
ATOM 16 O2 U A1193 47.966 127.108 119.491 1.00 50.46 O
ATOM 17 N3 U A1193 48.730 125.910 117.720 1.00 47.94 N
ATOM 18 C4 U A1193 49.508 124.963 117.117 1.00 45.98 C
ATOM 19 O4 U A1193 49.406 124.782 115.906 1.00 45.02 O
ATOM 20 C5 U A1193 50.389 124.274 117.997 1.00 47.51 C
ATOM 21 C6 U A1193 50.407 124.586 119.293 1.00 47.36 C
ATOM 22 P G A1194 48.942 126.568 125.559 1.00 44.32 P
ATOM 23 OP1 G A1194 48.425 127.957 125.721 1.00 46.77 O
ATOM 24 OP2 G A1194 50.116 126.116 126.356 1.00 43.45 O
ATOM 25 O5' G A1194 47.749 125.551 125.814 1.00 42.92 O
TER
ATOM 1 O3' C B2011 44.795 128.504 116.174 1.00 39.11 O
ATOM 2 P C B2012 45.590 127.128 115.987 1.00 38.88 P
ATOM 3 OP1 C B2012 46.980 127.380 116.399 1.00 39.40 O
ATOM 4 OP2 C B2012 45.314 126.613 114.637 1.00 38.09 O
ATOM 5 O5' C B2012 44.901 126.164 117.042 1.00 36.88 O
ATOM 6 C5' C B2012 44.924 126.490 118.435 1.00 37.95 C
ATOM 7 C4' C B2012 44.181 125.451 119.230 1.00 37.88 C
ATOM 8 O4' C B2012 42.776 125.461 118.880 1.00 36.82 O
ATOM 9 C3' C B2012 44.642 124.030 118.997 1.00 38.34 C
ATOM 10 O3' C B2012 45.775 123.786 119.826 1.00 39.36 O
ATOM 11 C2' C B2012 43.404 123.215 119.365 1.00 37.13 C
ATOM 12 O2' C B2012 43.257 123.007 120.754 1.00 38.41 O
ATOM 13 C1' C B2012 42.275 124.139 118.895 1.00 36.00 C
ATOM 14 N1 C B2012 41.720 123.847 117.563 1.00 34.41 N
ATOM 15 C2 C B2012 40.806 122.803 117.425 1.00 33.69 C
ATOM 16 O2 C B2012 40.534 122.118 118.410 1.00 33.89 O
ATOM 17 N3 C B2012 40.248 122.565 116.217 1.00 34.62 N
ATOM 18 C4 C B2012 40.586 123.320 115.167 1.00 35.83 C
ATOM 19 N4 C B2012 40.000 123.069 113.992 1.00 35.37 N
ATOM 20 C5 C B2012 41.541 124.370 115.274 1.00 35.20 C
ATOM 21 C6 C B2012 42.078 124.597 116.477 1.00 34.57 C
ATOM 22 P A B2013 46.659 122.468 119.616 1.00 43.35 P
ATOM 23 OP1 A B2013 47.524 122.330 120.819 1.00 42.96 O
ATOM 24 OP2 A B2013 47.279 122.544 118.262 1.00 41.15 O
ATOM 25 O5' A B2013 45.598 121.281 119.645 1.00 40.28 O
TER
ATOM 2 P U A1193 53.036 122.484 121.747 1.00 42.53 P
ATOM 3 OP1 U A1193 52.317 121.420 121.006 1.00 41.16 O
ATOM 4 OP2 U A1193 54.260 123.092 121.168 1.00 40.32 O
ATOM 5 O5' U A1193 52.019 123.670 122.038 1.00 44.33 O
ATOM 6 C5' U A1193 52.379 124.753 122.917 1.00 44.94 C
ATOM 7 C4' U A1193 51.270 125.775 122.954 1.00 44.67 C
ATOM 8 O4' U A1193 50.996 126.220 121.597 1.00 46.54 O
ATOM 9 C3' U A1193 49.933 125.286 123.499 1.00 44.08 C
ATOM 10 O3' U A1193 49.252 126.428 123.996 1.00 44.20 O
ATOM 11 C2' U A1193 49.223 124.815 122.237 1.00 45.78 C
ATOM 12 O2' U A1193 47.814 124.766 122.363 1.00 45.38 O
ATOM 13 C1' U A1193 49.658 125.906 121.259 1.00 47.04 C
ATOM 14 N1 U A1193 49.604 125.556 119.832 1.00 47.50 N
ATOM 15 C2 U A1193 48.717 126.252 119.047 1.00 48.62 C
ATOM 16 O2 U A1193 47.966 127.108 119.491 1.00 50.46 O
ATOM 17 N3 U A1193 48.730 125.910 117.720 1.00 47.94 N
ATOM 18 C4 U A1193 49.508 124.963 117.117 1.00 45.98 C
ATOM 19 O4 U A1193 49.406 124.782 115.906 1.00 45.02 O
ATOM 20 C5 U A1193 50.389 124.274 117.997 1.00 47.51 C
ATOM 21 C6 U A1193 50.407 124.586 119.293 1.00 47.36 C
ATOM 22 P G A1194 48.942 126.568 125.559 1.00 44.32 P
ATOM 23 OP1 G A1194 48.425 127.957 125.721 1.00 46.77 O
ATOM 24 OP2 G A1194 50.116 126.116 126.356 1.00 43.45 O
ATOM 25 O5' G A1194 47.749 125.551 125.814 1.00 42.92 O
TER
ATOM 1 O3' C B2011 44.795 128.504 116.174 1.00 39.11 O
ATOM 2 P C B2012 45.590 127.128 115.987 1.00 38.88 P
ATOM 3 OP1 C B2012 46.980 127.380 116.399 1.00 39.40 O
ATOM 4 OP2 C B2012 45.314 126.613 114.637 1.00 38.09 O
ATOM 5 O5' C B2012 44.901 126.164 117.042 1.00 36.88 O
ATOM 6 C5' C B2012 44.924 126.490 118.435 1.00 37.95 C
ATOM 7 C4' C B2012 44.181 125.451 119.230 1.00 37.88 C
ATOM 8 O4' C B2012 42.776 125.461 118.880 1.00 36.82 O
ATOM 9 C3' C B2012 44.642 124.030 118.997 1.00 38.34 C
ATOM 10 O3' C B2012 45.775 123.786 119.826 1.00 39.36 O
ATOM 11 C2' C B2012 43.404 123.215 119.365 1.00 37.13 C
ATOM 12 O2' C B2012 43.257 123.007 120.754 1.00 38.41 O
ATOM 13 C1' C B2012 42.275 124.139 118.895 1.00 36.00 C
ATOM 14 N1 C B2012 41.720 123.847 117.563 1.00 34.41 N
ATOM 15 C2 C B2012 40.806 122.803 117.425 1.00 33.69 C
ATOM 16 O2 C B2012 40.534 122.118 118.410 1.00 33.89 O
ATOM 17 N3 C B2012 40.248 122.565 116.217 1.00 34.62 N
ATOM 18 C4 C B2012 40.586 123.320 115.167 1.00 35.83 C
ATOM 19 N4 C B2012 40.000 123.069 113.992 1.00 35.37 N
ATOM 20 C5 C B2012 41.541 124.370 115.274 1.00 35.20 C
ATOM 21 C6 C B2012 42.078 124.597 116.477 1.00 34.57 C
ATOM 22 P A B2013 46.659 122.468 119.616 1.00 43.35 P
ATOM 23 OP1 A B2013 47.524 122.330 120.819 1.00 42.96 O
ATOM 24 OP2 A B2013 47.279 122.544 118.262 1.00 41.15 O
ATOM 25 O5' A B2013 45.598 121.281 119.645 1.00 40.28 O
TER
Atoms:
C4: (49.508,124.963,117.117)
N3: (48.730,125.910,117.720)
OP1: (52.317,121.420,121.006)
OP2: (54.260,123.092,121.168)
C2: (48.717,126.252,119.047)
C1': (49.658,125.906,121.259)
C3': (49.933,125.286,123.499)
O5': (52.019,123.670,122.038)
O4': (50.996,126.220,121.597)
C5': (52.379,124.753,122.917)
P: (53.036,122.484,121.747)
C4': (51.270,125.775,122.954)
C2': (49.223,124.815,122.237)
O2': (47.814,124.766,122.363)
N1: (49.604,125.556,119.832)
O4: (49.406,124.782,115.906)
O2: (47.966,127.108,119.491)
C6: (50.407,124.586,119.293)
C5: (50.389,124.274,117.997)
O3': (49.252,126.428,123.996)
N3: (48.730,125.910,117.720)
OP1: (52.317,121.420,121.006)
OP2: (54.260,123.092,121.168)
C2: (48.717,126.252,119.047)
C1': (49.658,125.906,121.259)
C3': (49.933,125.286,123.499)
O5': (52.019,123.670,122.038)
O4': (50.996,126.220,121.597)
C5': (52.379,124.753,122.917)
P: (53.036,122.484,121.747)
C4': (51.270,125.775,122.954)
C2': (49.223,124.815,122.237)
O2': (47.814,124.766,122.363)
N1: (49.604,125.556,119.832)
O4: (49.406,124.782,115.906)
O2: (47.966,127.108,119.491)
C6: (50.407,124.586,119.293)
C5: (50.389,124.274,117.997)
O3': (49.252,126.428,123.996)
C2: (40.806,122.803,117.425)
OP1: (46.980,127.380,116.399)
OP2: (45.314,126.613,114.637)
C4: (40.586,123.320,115.167)
O5': (44.901,126.164,117.042)
C3': (44.642,124.030,118.997)
C1': (42.275,124.139,118.895)
O4': (42.776,125.461,118.880)
C5': (44.924,126.490,118.435)
P: (45.590,127.128,115.987)
O2: (40.534,122.118,118.410)
C4': (44.181,125.451,119.230)
C2': (43.404,123.215,119.365)
O2': (43.257,123.007,120.754)
N1: (41.720,123.847,117.563)
N3: (40.248,122.565,116.217)
N4: (40.000,123.069,113.992)
C6: (42.078,124.597,116.477)
C5: (41.541,124.370,115.274)
O3': (45.775,123.786,119.826)
OP1: (46.980,127.380,116.399)
OP2: (45.314,126.613,114.637)
C4: (40.586,123.320,115.167)
O5': (44.901,126.164,117.042)
C3': (44.642,124.030,118.997)
C1': (42.275,124.139,118.895)
O4': (42.776,125.461,118.880)
C5': (44.924,126.490,118.435)
P: (45.590,127.128,115.987)
O2: (40.534,122.118,118.410)
C4': (44.181,125.451,119.230)
C2': (43.404,123.215,119.365)
O2': (43.257,123.007,120.754)
N1: (41.720,123.847,117.563)
N3: (40.248,122.565,116.217)
N4: (40.000,123.069,113.992)
C6: (42.078,124.597,116.477)
C5: (41.541,124.370,115.274)
O3': (45.775,123.786,119.826)
Image (generated by PyMOL):