Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 90.841 118.726 2.988 1.00 46.01 O
ATOM 2 P U A 253 89.528 118.608 3.904 1.00 47.71 P
ATOM 3 OP1 U A 253 89.886 119.171 5.237 1.00 46.49 O
ATOM 4 OP2 U A 253 89.013 117.216 3.814 1.00 46.56 O
ATOM 5 O5' U A 253 88.476 119.573 3.191 1.00 46.76 O
ATOM 6 C5' U A 253 88.326 120.953 3.596 1.00 46.64 C
ATOM 7 C4' U A 253 87.928 121.798 2.410 1.00 47.36 C
ATOM 8 O4' U A 253 89.061 121.937 1.513 1.00 47.55 O
ATOM 9 C3' U A 253 86.837 121.192 1.542 1.00 46.91 C
ATOM 10 O3' U A 253 85.539 121.454 2.054 1.00 46.15 O
ATOM 11 C2' U A 253 87.084 121.846 0.190 1.00 45.49 C
ATOM 12 O2' U A 253 86.551 123.153 0.102 1.00 43.69 O
ATOM 13 C1' U A 253 88.613 121.903 0.164 1.00 44.35 C
ATOM 14 N1 U A 253 89.241 120.746 -0.501 1.00 43.21 N
ATOM 15 C2 U A 253 89.077 120.615 -1.874 1.00 43.09 C
ATOM 16 O2 U A 253 88.460 121.424 -2.554 1.00 43.93 O
ATOM 17 N3 U A 253 89.662 119.503 -2.421 1.00 41.20 N
ATOM 18 C4 U A 253 90.385 118.533 -1.759 1.00 43.26 C
ATOM 19 O4 U A 253 90.786 117.543 -2.380 1.00 42.00 O
ATOM 20 C5 U A 253 90.527 118.753 -0.351 1.00 42.51 C
ATOM 21 C6 U A 253 89.963 119.822 0.213 1.00 41.31 C
ATOM 22 P G A 254 84.443 120.282 2.056 1.00 47.38 P
ATOM 23 OP1 G A 254 83.152 120.894 2.499 1.00 46.32 O
ATOM 24 OP2 G A 254 85.018 119.131 2.806 1.00 46.64 O
ATOM 25 O5' G A 254 84.319 119.850 0.524 1.00 48.74 O
TER
ATOM 1 O3' G B 234 93.516 117.271 -8.263 1.00 57.28 O
ATOM 2 P A B 235 93.995 118.242 -9.444 1.00 57.11 P
ATOM 3 OP1 A B 235 93.495 117.656 -10.719 1.00 58.67 O
ATOM 4 OP2 A B 235 95.452 118.472 -9.266 1.00 56.50 O
ATOM 5 O5' A B 235 93.207 119.598 -9.165 1.00 55.87 O
ATOM 6 C5' A B 235 91.794 119.714 -9.454 1.00 53.76 C
ATOM 7 C4' A B 235 91.204 120.879 -8.689 1.00 54.06 C
ATOM 8 O4' A B 235 91.082 120.533 -7.274 1.00 52.86 O
ATOM 9 C3' A B 235 92.042 122.155 -8.734 1.00 53.12 C
ATOM 10 O3' A B 235 91.185 123.290 -8.633 1.00 54.90 O
ATOM 11 C2' A B 235 92.867 122.026 -7.457 1.00 52.14 C
ATOM 12 O2' A B 235 93.419 123.233 -6.969 1.00 53.21 O
ATOM 13 C1' A B 235 91.815 121.462 -6.503 1.00 51.11 C
ATOM 14 N9 A B 235 92.367 120.787 -5.330 1.00 48.87 N
ATOM 15 C8 A B 235 93.054 119.600 -5.274 1.00 47.85 C
ATOM 16 N7 A B 235 93.461 119.282 -4.071 1.00 45.59 N
ATOM 17 C5 A B 235 93.000 120.326 -3.277 1.00 46.11 C
ATOM 18 C6 A B 235 93.114 120.589 -1.899 1.00 43.52 C
ATOM 19 N6 A B 235 93.755 119.789 -1.046 1.00 41.62 N
ATOM 20 N1 A B 235 92.543 121.717 -1.426 1.00 42.81 N
ATOM 21 C2 A B 235 91.906 122.520 -2.282 1.00 44.23 C
ATOM 22 N3 A B 235 91.734 122.383 -3.596 1.00 47.23 N
ATOM 23 C4 A B 235 92.315 121.253 -4.037 1.00 46.63 C
ATOM 24 P A B 236 90.606 123.974 -9.966 1.00 56.69 P
ATOM 25 OP1 A B 236 91.673 123.872 -10.998 1.00 57.39 O
ATOM 26 OP2 A B 236 90.067 125.309 -9.590 1.00 56.48 O
ATOM 27 O5' A B 236 89.379 123.045 -10.395 1.00 54.38 O
TER
ATOM 2 P U A 253 89.528 118.608 3.904 1.00 47.71 P
ATOM 3 OP1 U A 253 89.886 119.171 5.237 1.00 46.49 O
ATOM 4 OP2 U A 253 89.013 117.216 3.814 1.00 46.56 O
ATOM 5 O5' U A 253 88.476 119.573 3.191 1.00 46.76 O
ATOM 6 C5' U A 253 88.326 120.953 3.596 1.00 46.64 C
ATOM 7 C4' U A 253 87.928 121.798 2.410 1.00 47.36 C
ATOM 8 O4' U A 253 89.061 121.937 1.513 1.00 47.55 O
ATOM 9 C3' U A 253 86.837 121.192 1.542 1.00 46.91 C
ATOM 10 O3' U A 253 85.539 121.454 2.054 1.00 46.15 O
ATOM 11 C2' U A 253 87.084 121.846 0.190 1.00 45.49 C
ATOM 12 O2' U A 253 86.551 123.153 0.102 1.00 43.69 O
ATOM 13 C1' U A 253 88.613 121.903 0.164 1.00 44.35 C
ATOM 14 N1 U A 253 89.241 120.746 -0.501 1.00 43.21 N
ATOM 15 C2 U A 253 89.077 120.615 -1.874 1.00 43.09 C
ATOM 16 O2 U A 253 88.460 121.424 -2.554 1.00 43.93 O
ATOM 17 N3 U A 253 89.662 119.503 -2.421 1.00 41.20 N
ATOM 18 C4 U A 253 90.385 118.533 -1.759 1.00 43.26 C
ATOM 19 O4 U A 253 90.786 117.543 -2.380 1.00 42.00 O
ATOM 20 C5 U A 253 90.527 118.753 -0.351 1.00 42.51 C
ATOM 21 C6 U A 253 89.963 119.822 0.213 1.00 41.31 C
ATOM 22 P G A 254 84.443 120.282 2.056 1.00 47.38 P
ATOM 23 OP1 G A 254 83.152 120.894 2.499 1.00 46.32 O
ATOM 24 OP2 G A 254 85.018 119.131 2.806 1.00 46.64 O
ATOM 25 O5' G A 254 84.319 119.850 0.524 1.00 48.74 O
TER
ATOM 1 O3' G B 234 93.516 117.271 -8.263 1.00 57.28 O
ATOM 2 P A B 235 93.995 118.242 -9.444 1.00 57.11 P
ATOM 3 OP1 A B 235 93.495 117.656 -10.719 1.00 58.67 O
ATOM 4 OP2 A B 235 95.452 118.472 -9.266 1.00 56.50 O
ATOM 5 O5' A B 235 93.207 119.598 -9.165 1.00 55.87 O
ATOM 6 C5' A B 235 91.794 119.714 -9.454 1.00 53.76 C
ATOM 7 C4' A B 235 91.204 120.879 -8.689 1.00 54.06 C
ATOM 8 O4' A B 235 91.082 120.533 -7.274 1.00 52.86 O
ATOM 9 C3' A B 235 92.042 122.155 -8.734 1.00 53.12 C
ATOM 10 O3' A B 235 91.185 123.290 -8.633 1.00 54.90 O
ATOM 11 C2' A B 235 92.867 122.026 -7.457 1.00 52.14 C
ATOM 12 O2' A B 235 93.419 123.233 -6.969 1.00 53.21 O
ATOM 13 C1' A B 235 91.815 121.462 -6.503 1.00 51.11 C
ATOM 14 N9 A B 235 92.367 120.787 -5.330 1.00 48.87 N
ATOM 15 C8 A B 235 93.054 119.600 -5.274 1.00 47.85 C
ATOM 16 N7 A B 235 93.461 119.282 -4.071 1.00 45.59 N
ATOM 17 C5 A B 235 93.000 120.326 -3.277 1.00 46.11 C
ATOM 18 C6 A B 235 93.114 120.589 -1.899 1.00 43.52 C
ATOM 19 N6 A B 235 93.755 119.789 -1.046 1.00 41.62 N
ATOM 20 N1 A B 235 92.543 121.717 -1.426 1.00 42.81 N
ATOM 21 C2 A B 235 91.906 122.520 -2.282 1.00 44.23 C
ATOM 22 N3 A B 235 91.734 122.383 -3.596 1.00 47.23 N
ATOM 23 C4 A B 235 92.315 121.253 -4.037 1.00 46.63 C
ATOM 24 P A B 236 90.606 123.974 -9.966 1.00 56.69 P
ATOM 25 OP1 A B 236 91.673 123.872 -10.998 1.00 57.39 O
ATOM 26 OP2 A B 236 90.067 125.309 -9.590 1.00 56.48 O
ATOM 27 O5' A B 236 89.379 123.045 -10.395 1.00 54.38 O
TER
Atoms:
C4: (90.385,118.533,-1.759)
N3: (89.662,119.503,-2.421)
OP1: (89.886,119.171,5.237)
OP2: (89.013,117.216,3.814)
C2: (89.077,120.615,-1.874)
C1': (88.613,121.903,0.164)
C3': (86.837,121.192,1.542)
O5': (88.476,119.573,3.191)
O4': (89.061,121.937,1.513)
C5': (88.326,120.953,3.596)
P: (89.528,118.608,3.904)
C4': (87.928,121.798,2.410)
C2': (87.084,121.846,0.190)
O2': (86.551,123.153,0.102)
N1: (89.241,120.746,-0.501)
O4: (90.786,117.543,-2.380)
O2: (88.460,121.424,-2.554)
C6: (89.963,119.822,0.213)
C5: (90.527,118.753,-0.351)
O3': (85.539,121.454,2.054)
N3: (89.662,119.503,-2.421)
OP1: (89.886,119.171,5.237)
OP2: (89.013,117.216,3.814)
C2: (89.077,120.615,-1.874)
C1': (88.613,121.903,0.164)
C3': (86.837,121.192,1.542)
O5': (88.476,119.573,3.191)
O4': (89.061,121.937,1.513)
C5': (88.326,120.953,3.596)
P: (89.528,118.608,3.904)
C4': (87.928,121.798,2.410)
C2': (87.084,121.846,0.190)
O2': (86.551,123.153,0.102)
N1: (89.241,120.746,-0.501)
O4: (90.786,117.543,-2.380)
O2: (88.460,121.424,-2.554)
C6: (89.963,119.822,0.213)
C5: (90.527,118.753,-0.351)
O3': (85.539,121.454,2.054)
OP1: (93.495,117.656,-10.719)
OP2: (95.452,118.472,-9.266)
C3': (92.042,122.155,-8.734)
C1': (91.815,121.462,-6.503)
C5': (91.794,119.714,-9.454)
O4': (91.082,120.533,-7.274)
C8: (93.054,119.600,-5.274)
O2': (93.419,123.233,-6.969)
C6: (93.114,120.589,-1.899)
C5: (93.000,120.326,-3.277)
C4: (92.315,121.253,-4.037)
P: (93.995,118.242,-9.444)
C4': (91.204,120.879,-8.689)
C2': (92.867,122.026,-7.457)
C2: (91.906,122.520,-2.282)
N1: (92.543,121.717,-1.426)
N3: (91.734,122.383,-3.596)
N6: (93.755,119.789,-1.046)
N7: (93.461,119.282,-4.071)
N9: (92.367,120.787,-5.330)
O5': (93.207,119.598,-9.165)
O3': (91.185,123.290,-8.633)
OP2: (95.452,118.472,-9.266)
C3': (92.042,122.155,-8.734)
C1': (91.815,121.462,-6.503)
C5': (91.794,119.714,-9.454)
O4': (91.082,120.533,-7.274)
C8: (93.054,119.600,-5.274)
O2': (93.419,123.233,-6.969)
C6: (93.114,120.589,-1.899)
C5: (93.000,120.326,-3.277)
C4: (92.315,121.253,-4.037)
P: (93.995,118.242,-9.444)
C4': (91.204,120.879,-8.689)
C2': (92.867,122.026,-7.457)
C2: (91.906,122.520,-2.282)
N1: (92.543,121.717,-1.426)
N3: (91.734,122.383,-3.596)
N6: (93.755,119.789,-1.046)
N7: (93.461,119.282,-4.071)
N9: (92.367,120.787,-5.330)
O5': (93.207,119.598,-9.165)
O3': (91.185,123.290,-8.633)
Image (generated by PyMOL):