Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 91.243 119.642 3.494 1.00 50.13 O
ATOM 2 P U A 253 89.934 119.516 4.414 1.00 50.66 P
ATOM 3 OP1 U A 253 90.276 120.113 5.729 1.00 51.04 O
ATOM 4 OP2 U A 253 89.461 118.114 4.347 1.00 50.71 O
ATOM 5 O5' U A 253 88.849 120.440 3.700 1.00 50.86 O
ATOM 6 C5' U A 253 88.672 121.817 4.084 1.00 50.72 C
ATOM 7 C4' U A 253 88.324 122.648 2.877 1.00 51.56 C
ATOM 8 O4' U A 253 89.470 122.722 1.991 1.00 52.81 O
ATOM 9 C3' U A 253 87.228 122.057 2.015 1.00 52.39 C
ATOM 10 O3' U A 253 85.950 122.389 2.524 1.00 53.98 O
ATOM 11 C2' U A 253 87.502 122.683 0.657 1.00 52.57 C
ATOM 12 O2' U A 253 87.005 124.001 0.558 1.00 53.17 O
ATOM 13 C1' U A 253 89.035 122.705 0.640 1.00 52.32 C
ATOM 14 N1 U A 253 89.647 121.547 -0.036 1.00 51.49 N
ATOM 15 C2 U A 253 89.433 121.401 -1.402 1.00 51.23 C
ATOM 16 O2 U A 253 88.792 122.198 -2.071 1.00 52.46 O
ATOM 17 N3 U A 253 90.000 120.287 -1.958 1.00 49.65 N
ATOM 18 C4 U A 253 90.745 119.328 -1.320 1.00 51.07 C
ATOM 19 O4 U A 253 91.145 118.355 -1.960 1.00 51.63 O
ATOM 20 C5 U A 253 90.943 119.555 0.081 1.00 51.11 C
ATOM 21 C6 U A 253 90.402 120.627 0.660 1.00 50.07 C
ATOM 22 P G A 254 84.828 121.252 2.633 1.00 55.20 P
ATOM 23 OP1 G A 254 83.582 121.901 3.134 1.00 52.77 O
ATOM 24 OP2 G A 254 85.431 120.118 3.382 1.00 53.98 O
ATOM 25 O5' G A 254 84.607 120.775 1.126 1.00 55.45 O
TER
ATOM 1 O3' G B 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 2 P A B 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 3 OP1 A B 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 4 OP2 A B 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 5 O5' A B 235 93.421 120.442 -8.519 1.00 63.20 O
ATOM 6 C5' A B 235 92.023 120.540 -8.850 1.00 62.71 C
ATOM 7 C4' A B 235 91.411 121.710 -8.129 1.00 63.23 C
ATOM 8 O4' A B 235 91.311 121.397 -6.712 1.00 62.65 O
ATOM 9 C3' A B 235 92.232 122.991 -8.220 1.00 63.70 C
ATOM 10 O3' A B 235 91.361 124.117 -8.176 1.00 64.63 O
ATOM 11 C2' A B 235 93.074 122.919 -6.950 1.00 62.92 C
ATOM 12 O2' A B 235 93.561 124.170 -6.515 1.00 63.59 O
ATOM 13 C1' A B 235 92.063 122.334 -5.968 1.00 62.79 C
ATOM 14 N9 A B 235 92.649 121.648 -4.818 1.00 63.10 N
ATOM 15 C8 A B 235 93.334 120.458 -4.795 1.00 64.06 C
ATOM 16 N7 A B 235 93.741 120.106 -3.600 1.00 63.74 N
ATOM 17 C5 A B 235 93.295 121.134 -2.781 1.00 62.77 C
ATOM 18 C6 A B 235 93.415 121.361 -1.402 1.00 61.24 C
ATOM 19 N6 A B 235 94.048 120.538 -0.570 1.00 61.47 N
ATOM 20 N1 A B 235 92.858 122.480 -0.901 1.00 60.33 N
ATOM 21 C2 A B 235 92.229 123.310 -1.735 1.00 62.05 C
ATOM 22 N3 A B 235 92.054 123.211 -3.048 1.00 62.84 N
ATOM 23 C4 A B 235 92.618 122.087 -3.516 1.00 62.83 C
ATOM 24 P A B 236 90.873 124.797 -9.545 1.00 65.59 P
ATOM 25 OP1 A B 236 91.964 124.578 -10.534 1.00 64.81 O
ATOM 26 OP2 A B 236 90.390 126.177 -9.273 1.00 66.33 O
ATOM 27 O5' A B 236 89.613 123.929 -9.981 1.00 63.22 O
TER
ATOM 2 P U A 253 89.934 119.516 4.414 1.00 50.66 P
ATOM 3 OP1 U A 253 90.276 120.113 5.729 1.00 51.04 O
ATOM 4 OP2 U A 253 89.461 118.114 4.347 1.00 50.71 O
ATOM 5 O5' U A 253 88.849 120.440 3.700 1.00 50.86 O
ATOM 6 C5' U A 253 88.672 121.817 4.084 1.00 50.72 C
ATOM 7 C4' U A 253 88.324 122.648 2.877 1.00 51.56 C
ATOM 8 O4' U A 253 89.470 122.722 1.991 1.00 52.81 O
ATOM 9 C3' U A 253 87.228 122.057 2.015 1.00 52.39 C
ATOM 10 O3' U A 253 85.950 122.389 2.524 1.00 53.98 O
ATOM 11 C2' U A 253 87.502 122.683 0.657 1.00 52.57 C
ATOM 12 O2' U A 253 87.005 124.001 0.558 1.00 53.17 O
ATOM 13 C1' U A 253 89.035 122.705 0.640 1.00 52.32 C
ATOM 14 N1 U A 253 89.647 121.547 -0.036 1.00 51.49 N
ATOM 15 C2 U A 253 89.433 121.401 -1.402 1.00 51.23 C
ATOM 16 O2 U A 253 88.792 122.198 -2.071 1.00 52.46 O
ATOM 17 N3 U A 253 90.000 120.287 -1.958 1.00 49.65 N
ATOM 18 C4 U A 253 90.745 119.328 -1.320 1.00 51.07 C
ATOM 19 O4 U A 253 91.145 118.355 -1.960 1.00 51.63 O
ATOM 20 C5 U A 253 90.943 119.555 0.081 1.00 51.11 C
ATOM 21 C6 U A 253 90.402 120.627 0.660 1.00 50.07 C
ATOM 22 P G A 254 84.828 121.252 2.633 1.00 55.20 P
ATOM 23 OP1 G A 254 83.582 121.901 3.134 1.00 52.77 O
ATOM 24 OP2 G A 254 85.431 120.118 3.382 1.00 53.98 O
ATOM 25 O5' G A 254 84.607 120.775 1.126 1.00 55.45 O
TER
ATOM 1 O3' G B 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 2 P A B 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 3 OP1 A B 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 4 OP2 A B 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 5 O5' A B 235 93.421 120.442 -8.519 1.00 63.20 O
ATOM 6 C5' A B 235 92.023 120.540 -8.850 1.00 62.71 C
ATOM 7 C4' A B 235 91.411 121.710 -8.129 1.00 63.23 C
ATOM 8 O4' A B 235 91.311 121.397 -6.712 1.00 62.65 O
ATOM 9 C3' A B 235 92.232 122.991 -8.220 1.00 63.70 C
ATOM 10 O3' A B 235 91.361 124.117 -8.176 1.00 64.63 O
ATOM 11 C2' A B 235 93.074 122.919 -6.950 1.00 62.92 C
ATOM 12 O2' A B 235 93.561 124.170 -6.515 1.00 63.59 O
ATOM 13 C1' A B 235 92.063 122.334 -5.968 1.00 62.79 C
ATOM 14 N9 A B 235 92.649 121.648 -4.818 1.00 63.10 N
ATOM 15 C8 A B 235 93.334 120.458 -4.795 1.00 64.06 C
ATOM 16 N7 A B 235 93.741 120.106 -3.600 1.00 63.74 N
ATOM 17 C5 A B 235 93.295 121.134 -2.781 1.00 62.77 C
ATOM 18 C6 A B 235 93.415 121.361 -1.402 1.00 61.24 C
ATOM 19 N6 A B 235 94.048 120.538 -0.570 1.00 61.47 N
ATOM 20 N1 A B 235 92.858 122.480 -0.901 1.00 60.33 N
ATOM 21 C2 A B 235 92.229 123.310 -1.735 1.00 62.05 C
ATOM 22 N3 A B 235 92.054 123.211 -3.048 1.00 62.84 N
ATOM 23 C4 A B 235 92.618 122.087 -3.516 1.00 62.83 C
ATOM 24 P A B 236 90.873 124.797 -9.545 1.00 65.59 P
ATOM 25 OP1 A B 236 91.964 124.578 -10.534 1.00 64.81 O
ATOM 26 OP2 A B 236 90.390 126.177 -9.273 1.00 66.33 O
ATOM 27 O5' A B 236 89.613 123.929 -9.981 1.00 63.22 O
TER
Atoms:
C4: (90.745,119.328,-1.320)
N3: (90.000,120.287,-1.958)
OP1: (90.276,120.113,5.729)
OP2: (89.461,118.114,4.347)
C2: (89.433,121.401,-1.402)
C1': (89.035,122.705,0.640)
C3': (87.228,122.057,2.015)
O5': (88.849,120.440,3.700)
O4': (89.470,122.722,1.991)
C5': (88.672,121.817,4.084)
P: (89.934,119.516,4.414)
C4': (88.324,122.648,2.877)
C2': (87.502,122.683,0.657)
O2': (87.005,124.001,0.558)
N1: (89.647,121.547,-0.036)
O4: (91.145,118.355,-1.960)
O2: (88.792,122.198,-2.071)
C6: (90.402,120.627,0.660)
C5: (90.943,119.555,0.081)
O3': (85.950,122.389,2.524)
N3: (90.000,120.287,-1.958)
OP1: (90.276,120.113,5.729)
OP2: (89.461,118.114,4.347)
C2: (89.433,121.401,-1.402)
C1': (89.035,122.705,0.640)
C3': (87.228,122.057,2.015)
O5': (88.849,120.440,3.700)
O4': (89.470,122.722,1.991)
C5': (88.672,121.817,4.084)
P: (89.934,119.516,4.414)
C4': (88.324,122.648,2.877)
C2': (87.502,122.683,0.657)
O2': (87.005,124.001,0.558)
N1: (89.647,121.547,-0.036)
O4: (91.145,118.355,-1.960)
O2: (88.792,122.198,-2.071)
C6: (90.402,120.627,0.660)
C5: (90.943,119.555,0.081)
O3': (85.950,122.389,2.524)
OP1: (93.717,118.588,-10.140)
OP2: (95.694,119.409,-8.724)
C3': (92.232,122.991,-8.220)
C1': (92.063,122.334,-5.968)
C5': (92.023,120.540,-8.850)
O4': (91.311,121.397,-6.712)
C8: (93.334,120.458,-4.795)
O2': (93.561,124.170,-6.515)
C6: (93.415,121.361,-1.402)
C5: (93.295,121.134,-2.781)
C4: (92.618,122.087,-3.516)
P: (94.246,119.126,-8.859)
C4': (91.411,121.710,-8.129)
C2': (93.074,122.919,-6.950)
C2: (92.229,123.310,-1.735)
N1: (92.858,122.480,-0.901)
N3: (92.054,123.211,-3.048)
N6: (94.048,120.538,-0.570)
N7: (93.741,120.106,-3.600)
N9: (92.649,121.648,-4.818)
O5': (93.421,120.442,-8.519)
O3': (91.361,124.117,-8.176)
OP2: (95.694,119.409,-8.724)
C3': (92.232,122.991,-8.220)
C1': (92.063,122.334,-5.968)
C5': (92.023,120.540,-8.850)
O4': (91.311,121.397,-6.712)
C8: (93.334,120.458,-4.795)
O2': (93.561,124.170,-6.515)
C6: (93.415,121.361,-1.402)
C5: (93.295,121.134,-2.781)
C4: (92.618,122.087,-3.516)
P: (94.246,119.126,-8.859)
C4': (91.411,121.710,-8.129)
C2': (93.074,122.919,-6.950)
C2: (92.229,123.310,-1.735)
N1: (92.858,122.480,-0.901)
N3: (92.054,123.211,-3.048)
N6: (94.048,120.538,-0.570)
N7: (93.741,120.106,-3.600)
N9: (92.649,121.648,-4.818)
O5': (93.421,120.442,-8.519)
O3': (91.361,124.117,-8.176)
Image (generated by PyMOL):