Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1321:A1309
Extra
PDB:
ATOM 1 O3' G A1320 43.427 -23.398 -47.544 1.00 54.97 O
ATOM 2 P U A1321 41.938 -23.597 -46.976 1.00 58.72 P
ATOM 3 OP1 U A1321 41.894 -23.002 -45.620 1.00 55.01 O
ATOM 4 OP2 U A1321 41.615 -25.034 -47.133 1.00 56.56 O
ATOM 5 O5' U A1321 41.063 -22.726 -47.978 1.00 93.59 O
ATOM 6 C5' U A1321 41.124 -21.303 -47.971 1.00101.34 C
ATOM 7 C4' U A1321 39.999 -20.704 -48.785 1.00108.31 C
ATOM 8 O4' U A1321 40.227 -20.960 -50.203 1.00105.96 O
ATOM 9 C3' U A1321 38.617 -21.286 -48.520 1.00112.90 C
ATOM 10 O3' U A1321 37.986 -20.743 -47.355 1.00109.69 O
ATOM 11 C2' U A1321 37.871 -21.031 -49.836 1.00 99.70 C
ATOM 12 O2' U A1321 37.392 -19.701 -49.897 1.00102.64 O
ATOM 13 C1' U A1321 38.995 -21.183 -50.866 1.00 98.46 C
ATOM 14 N1 U A1321 39.018 -22.540 -51.495 1.00 87.01 N
ATOM 15 C2 U A1321 38.197 -22.782 -52.587 1.00 86.84 C
ATOM 16 O2 U A1321 37.458 -21.926 -53.030 1.00 92.51 O
ATOM 17 N3 U A1321 38.255 -24.048 -53.133 1.00 74.54 N
ATOM 18 C4 U A1321 39.046 -25.097 -52.716 1.00 73.52 C
ATOM 19 O4 U A1321 39.006 -26.186 -53.282 1.00 70.09 O
ATOM 20 C5 U A1321 39.872 -24.779 -51.597 1.00 78.49 C
ATOM 21 C6 U A1321 39.834 -23.554 -51.045 1.00 83.65 C
ATOM 22 P A A1322 37.000 -21.661 -46.464 1.00 77.06 P
ATOM 23 OP1 A A1322 36.556 -20.850 -45.318 1.00 91.11 O
ATOM 24 OP2 A A1322 37.697 -22.932 -46.194 1.00 93.72 O
ATOM 25 O5' A A1322 35.793 -21.914 -47.464 1.00 61.72 O
TER
ATOM 1 O3' A B1308 38.632 -29.383 -59.046 1.00 79.62 O
ATOM 2 P A B1309 39.785 -28.671 -59.907 1.00 81.60 P
ATOM 3 OP1 A B1309 39.443 -28.863 -61.338 1.00 75.89 O
ATOM 4 OP2 A B1309 41.098 -29.198 -59.403 1.00 88.55 O
ATOM 5 O5' A B1309 39.620 -27.137 -59.513 1.00 52.31 O
ATOM 6 C5' A B1309 38.711 -26.317 -60.213 1.00 54.29 C
ATOM 7 C4' A B1309 38.842 -24.877 -59.821 1.00 48.87 C
ATOM 8 O4' A B1309 38.567 -24.719 -58.411 1.00 60.65 O
ATOM 9 C3' A B1309 40.210 -24.271 -59.971 1.00 46.78 C
ATOM 10 O3' A B1309 40.547 -23.981 -61.307 1.00 44.97 O
ATOM 11 C2' A B1309 40.111 -23.051 -59.062 1.00 50.90 C
ATOM 12 O2' A B1309 39.340 -22.025 -59.658 1.00 40.42 O
ATOM 13 C1' A B1309 39.311 -23.631 -57.902 1.00 54.52 C
ATOM 14 N9 A B1309 40.197 -24.125 -56.842 1.00 57.26 N
ATOM 15 C8 A B1309 40.798 -25.355 -56.723 1.00 58.40 C
ATOM 16 N7 A B1309 41.570 -25.454 -55.674 1.00 52.15 N
ATOM 17 C5 A B1309 41.462 -24.203 -55.093 1.00 56.74 C
ATOM 18 C6 A B1309 42.032 -23.665 -53.936 1.00 66.24 C
ATOM 19 N6 A B1309 42.860 -24.371 -53.147 1.00 62.94 N
ATOM 20 N1 A B1309 41.721 -22.377 -53.629 1.00 64.74 N
ATOM 21 C2 A B1309 40.887 -21.704 -54.437 1.00 62.24 C
ATOM 22 N3 A B1309 40.285 -22.113 -55.549 1.00 53.66 N
ATOM 23 C4 A B1309 40.628 -23.376 -55.806 1.00 50.53 C
ATOM 24 P G B1310 41.994 -24.379 -61.869 1.00 61.26 P
ATOM 25 OP1 G B1310 42.163 -23.657 -63.150 1.00 66.60 O
ATOM 26 OP2 G B1310 42.088 -25.859 -61.861 1.00 56.61 O
ATOM 27 O5' G B1310 42.977 -23.771 -60.776 1.00 57.06 O
TER
ATOM 2 P U A1321 41.938 -23.597 -46.976 1.00 58.72 P
ATOM 3 OP1 U A1321 41.894 -23.002 -45.620 1.00 55.01 O
ATOM 4 OP2 U A1321 41.615 -25.034 -47.133 1.00 56.56 O
ATOM 5 O5' U A1321 41.063 -22.726 -47.978 1.00 93.59 O
ATOM 6 C5' U A1321 41.124 -21.303 -47.971 1.00101.34 C
ATOM 7 C4' U A1321 39.999 -20.704 -48.785 1.00108.31 C
ATOM 8 O4' U A1321 40.227 -20.960 -50.203 1.00105.96 O
ATOM 9 C3' U A1321 38.617 -21.286 -48.520 1.00112.90 C
ATOM 10 O3' U A1321 37.986 -20.743 -47.355 1.00109.69 O
ATOM 11 C2' U A1321 37.871 -21.031 -49.836 1.00 99.70 C
ATOM 12 O2' U A1321 37.392 -19.701 -49.897 1.00102.64 O
ATOM 13 C1' U A1321 38.995 -21.183 -50.866 1.00 98.46 C
ATOM 14 N1 U A1321 39.018 -22.540 -51.495 1.00 87.01 N
ATOM 15 C2 U A1321 38.197 -22.782 -52.587 1.00 86.84 C
ATOM 16 O2 U A1321 37.458 -21.926 -53.030 1.00 92.51 O
ATOM 17 N3 U A1321 38.255 -24.048 -53.133 1.00 74.54 N
ATOM 18 C4 U A1321 39.046 -25.097 -52.716 1.00 73.52 C
ATOM 19 O4 U A1321 39.006 -26.186 -53.282 1.00 70.09 O
ATOM 20 C5 U A1321 39.872 -24.779 -51.597 1.00 78.49 C
ATOM 21 C6 U A1321 39.834 -23.554 -51.045 1.00 83.65 C
ATOM 22 P A A1322 37.000 -21.661 -46.464 1.00 77.06 P
ATOM 23 OP1 A A1322 36.556 -20.850 -45.318 1.00 91.11 O
ATOM 24 OP2 A A1322 37.697 -22.932 -46.194 1.00 93.72 O
ATOM 25 O5' A A1322 35.793 -21.914 -47.464 1.00 61.72 O
TER
ATOM 1 O3' A B1308 38.632 -29.383 -59.046 1.00 79.62 O
ATOM 2 P A B1309 39.785 -28.671 -59.907 1.00 81.60 P
ATOM 3 OP1 A B1309 39.443 -28.863 -61.338 1.00 75.89 O
ATOM 4 OP2 A B1309 41.098 -29.198 -59.403 1.00 88.55 O
ATOM 5 O5' A B1309 39.620 -27.137 -59.513 1.00 52.31 O
ATOM 6 C5' A B1309 38.711 -26.317 -60.213 1.00 54.29 C
ATOM 7 C4' A B1309 38.842 -24.877 -59.821 1.00 48.87 C
ATOM 8 O4' A B1309 38.567 -24.719 -58.411 1.00 60.65 O
ATOM 9 C3' A B1309 40.210 -24.271 -59.971 1.00 46.78 C
ATOM 10 O3' A B1309 40.547 -23.981 -61.307 1.00 44.97 O
ATOM 11 C2' A B1309 40.111 -23.051 -59.062 1.00 50.90 C
ATOM 12 O2' A B1309 39.340 -22.025 -59.658 1.00 40.42 O
ATOM 13 C1' A B1309 39.311 -23.631 -57.902 1.00 54.52 C
ATOM 14 N9 A B1309 40.197 -24.125 -56.842 1.00 57.26 N
ATOM 15 C8 A B1309 40.798 -25.355 -56.723 1.00 58.40 C
ATOM 16 N7 A B1309 41.570 -25.454 -55.674 1.00 52.15 N
ATOM 17 C5 A B1309 41.462 -24.203 -55.093 1.00 56.74 C
ATOM 18 C6 A B1309 42.032 -23.665 -53.936 1.00 66.24 C
ATOM 19 N6 A B1309 42.860 -24.371 -53.147 1.00 62.94 N
ATOM 20 N1 A B1309 41.721 -22.377 -53.629 1.00 64.74 N
ATOM 21 C2 A B1309 40.887 -21.704 -54.437 1.00 62.24 C
ATOM 22 N3 A B1309 40.285 -22.113 -55.549 1.00 53.66 N
ATOM 23 C4 A B1309 40.628 -23.376 -55.806 1.00 50.53 C
ATOM 24 P G B1310 41.994 -24.379 -61.869 1.00 61.26 P
ATOM 25 OP1 G B1310 42.163 -23.657 -63.150 1.00 66.60 O
ATOM 26 OP2 G B1310 42.088 -25.859 -61.861 1.00 56.61 O
ATOM 27 O5' G B1310 42.977 -23.771 -60.776 1.00 57.06 O
TER
Atoms:
C4: (39.046,-25.097,-52.716)
N3: (38.255,-24.048,-53.133)
OP1: (41.894,-23.002,-45.620)
OP2: (41.615,-25.034,-47.133)
C2: (38.197,-22.782,-52.587)
C1': (38.995,-21.183,-50.866)
C3': (38.617,-21.286,-48.520)
O5': (41.063,-22.726,-47.978)
O4': (40.227,-20.960,-50.203)
C5': (41.124,-21.303,-47.971)
P: (41.938,-23.597,-46.976)
C4': (39.999,-20.704,-48.785)
C2': (37.871,-21.031,-49.836)
O2': (37.392,-19.701,-49.897)
N1: (39.018,-22.540,-51.495)
O4: (39.006,-26.186,-53.282)
O2: (37.458,-21.926,-53.030)
C6: (39.834,-23.554,-51.045)
C5: (39.872,-24.779,-51.597)
O3': (37.986,-20.743,-47.355)
N3: (38.255,-24.048,-53.133)
OP1: (41.894,-23.002,-45.620)
OP2: (41.615,-25.034,-47.133)
C2: (38.197,-22.782,-52.587)
C1': (38.995,-21.183,-50.866)
C3': (38.617,-21.286,-48.520)
O5': (41.063,-22.726,-47.978)
O4': (40.227,-20.960,-50.203)
C5': (41.124,-21.303,-47.971)
P: (41.938,-23.597,-46.976)
C4': (39.999,-20.704,-48.785)
C2': (37.871,-21.031,-49.836)
O2': (37.392,-19.701,-49.897)
N1: (39.018,-22.540,-51.495)
O4: (39.006,-26.186,-53.282)
O2: (37.458,-21.926,-53.030)
C6: (39.834,-23.554,-51.045)
C5: (39.872,-24.779,-51.597)
O3': (37.986,-20.743,-47.355)
OP1: (39.443,-28.863,-61.338)
OP2: (41.098,-29.198,-59.403)
C3': (40.210,-24.271,-59.971)
C1': (39.311,-23.631,-57.902)
C5': (38.711,-26.317,-60.213)
O4': (38.567,-24.719,-58.411)
C8: (40.798,-25.355,-56.723)
O2': (39.340,-22.025,-59.658)
C6: (42.032,-23.665,-53.936)
C5: (41.462,-24.203,-55.093)
C4: (40.628,-23.376,-55.806)
P: (39.785,-28.671,-59.907)
C4': (38.842,-24.877,-59.821)
C2': (40.111,-23.051,-59.062)
C2: (40.887,-21.704,-54.437)
N1: (41.721,-22.377,-53.629)
N3: (40.285,-22.113,-55.549)
N6: (42.860,-24.371,-53.147)
N7: (41.570,-25.454,-55.674)
N9: (40.197,-24.125,-56.842)
O5': (39.620,-27.137,-59.513)
O3': (40.547,-23.981,-61.307)
OP2: (41.098,-29.198,-59.403)
C3': (40.210,-24.271,-59.971)
C1': (39.311,-23.631,-57.902)
C5': (38.711,-26.317,-60.213)
O4': (38.567,-24.719,-58.411)
C8: (40.798,-25.355,-56.723)
O2': (39.340,-22.025,-59.658)
C6: (42.032,-23.665,-53.936)
C5: (41.462,-24.203,-55.093)
C4: (40.628,-23.376,-55.806)
P: (39.785,-28.671,-59.907)
C4': (38.842,-24.877,-59.821)
C2': (40.111,-23.051,-59.062)
C2: (40.887,-21.704,-54.437)
N1: (41.721,-22.377,-53.629)
N3: (40.285,-22.113,-55.549)
N6: (42.860,-24.371,-53.147)
N7: (41.570,-25.454,-55.674)
N9: (40.197,-24.125,-56.842)
O5': (39.620,-27.137,-59.513)
O3': (40.547,-23.981,-61.307)
Image (generated by PyMOL):