Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01193:02012
Extra
PDB:
ATOM 1 O3' A A1192 53.276 121.729 122.797 1.00 40.07 O
ATOM 2 P U A1193 52.967 122.321 121.345 1.00 40.19 P
ATOM 3 OP1 U A1193 52.234 121.292 120.564 1.00 40.39 O
ATOM 4 OP2 U A1193 54.235 122.889 120.824 1.00 38.82 O
ATOM 5 O5' U A1193 51.955 123.511 121.633 1.00 40.36 O
ATOM 6 C5' U A1193 52.337 124.631 122.446 1.00 39.68 C
ATOM 7 C4' U A1193 51.207 125.630 122.503 1.00 38.66 C
ATOM 8 O4' U A1193 50.882 126.041 121.150 1.00 39.22 O
ATOM 9 C3' U A1193 49.901 125.131 123.102 1.00 37.17 C
ATOM 10 O3' U A1193 49.211 126.262 123.617 1.00 38.25 O
ATOM 11 C2' U A1193 49.163 124.620 121.874 1.00 38.40 C
ATOM 12 O2' U A1193 47.764 124.539 122.059 1.00 37.41 O
ATOM 13 C1' U A1193 49.545 125.694 120.856 1.00 39.49 C
ATOM 14 N1 U A1193 49.480 125.314 119.438 1.00 39.70 N
ATOM 15 C2 U A1193 48.632 126.030 118.621 1.00 41.21 C
ATOM 16 O2 U A1193 47.910 126.926 119.032 1.00 43.22 O
ATOM 17 N3 U A1193 48.655 125.662 117.301 1.00 41.22 N
ATOM 18 C4 U A1193 49.413 124.672 116.730 1.00 41.24 C
ATOM 19 O4 U A1193 49.355 124.490 115.516 1.00 42.10 O
ATOM 20 C5 U A1193 50.246 123.962 117.644 1.00 42.42 C
ATOM 21 C6 U A1193 50.250 124.298 118.934 1.00 41.04 C
ATOM 22 P G A1194 48.869 126.354 125.179 1.00 41.01 P
ATOM 23 OP1 G A1194 48.384 127.741 125.424 1.00 39.43 O
ATOM 24 OP2 G A1194 50.027 125.827 125.943 1.00 41.09 O
ATOM 25 O5' G A1194 47.661 125.339 125.383 1.00 39.96 O
TER
ATOM 1 O3' C B2011 44.599 128.279 115.787 1.00 39.01 O
ATOM 2 P C B2012 45.386 126.889 115.641 1.00 39.86 P
ATOM 3 OP1 C B2012 46.795 127.132 116.036 1.00 39.70 O
ATOM 4 OP2 C B2012 45.091 126.312 114.313 1.00 40.52 O
ATOM 5 O5' C B2012 44.694 125.946 116.715 1.00 38.61 O
ATOM 6 C5' C B2012 44.695 126.293 118.102 1.00 38.96 C
ATOM 7 C4' C B2012 43.976 125.235 118.889 1.00 39.09 C
ATOM 8 O4' C B2012 42.589 125.179 118.478 1.00 39.32 O
ATOM 9 C3' C B2012 44.503 123.838 118.658 1.00 38.60 C
ATOM 10 O3' C B2012 45.612 123.624 119.517 1.00 38.08 O
ATOM 11 C2' C B2012 43.299 122.962 118.989 1.00 40.30 C
ATOM 12 O2' C B2012 43.150 122.707 120.372 1.00 42.23 O
ATOM 13 C1' C B2012 42.139 123.840 118.511 1.00 39.62 C
ATOM 14 N1 C B2012 41.590 123.499 117.189 1.00 39.88 N
ATOM 15 C2 C B2012 40.607 122.508 117.106 1.00 39.75 C
ATOM 16 O2 C B2012 40.249 121.934 118.140 1.00 41.74 O
ATOM 17 N3 C B2012 40.072 122.204 115.905 1.00 38.42 N
ATOM 18 C4 C B2012 40.487 122.844 114.812 1.00 38.10 C
ATOM 19 N4 C B2012 39.929 122.516 113.651 1.00 37.73 N
ATOM 20 C5 C B2012 41.495 123.850 114.864 1.00 38.11 C
ATOM 21 C6 C B2012 42.016 124.142 116.060 1.00 38.56 C
ATOM 22 P A B2013 46.518 122.322 119.337 1.00 38.98 P
ATOM 23 OP1 A B2013 47.390 122.209 120.522 1.00 40.38 O
ATOM 24 OP2 A B2013 47.119 122.370 117.988 1.00 39.25 O
ATOM 25 O5' A B2013 45.472 121.128 119.380 1.00 39.14 O
TER
ATOM 2 P U A1193 52.967 122.321 121.345 1.00 40.19 P
ATOM 3 OP1 U A1193 52.234 121.292 120.564 1.00 40.39 O
ATOM 4 OP2 U A1193 54.235 122.889 120.824 1.00 38.82 O
ATOM 5 O5' U A1193 51.955 123.511 121.633 1.00 40.36 O
ATOM 6 C5' U A1193 52.337 124.631 122.446 1.00 39.68 C
ATOM 7 C4' U A1193 51.207 125.630 122.503 1.00 38.66 C
ATOM 8 O4' U A1193 50.882 126.041 121.150 1.00 39.22 O
ATOM 9 C3' U A1193 49.901 125.131 123.102 1.00 37.17 C
ATOM 10 O3' U A1193 49.211 126.262 123.617 1.00 38.25 O
ATOM 11 C2' U A1193 49.163 124.620 121.874 1.00 38.40 C
ATOM 12 O2' U A1193 47.764 124.539 122.059 1.00 37.41 O
ATOM 13 C1' U A1193 49.545 125.694 120.856 1.00 39.49 C
ATOM 14 N1 U A1193 49.480 125.314 119.438 1.00 39.70 N
ATOM 15 C2 U A1193 48.632 126.030 118.621 1.00 41.21 C
ATOM 16 O2 U A1193 47.910 126.926 119.032 1.00 43.22 O
ATOM 17 N3 U A1193 48.655 125.662 117.301 1.00 41.22 N
ATOM 18 C4 U A1193 49.413 124.672 116.730 1.00 41.24 C
ATOM 19 O4 U A1193 49.355 124.490 115.516 1.00 42.10 O
ATOM 20 C5 U A1193 50.246 123.962 117.644 1.00 42.42 C
ATOM 21 C6 U A1193 50.250 124.298 118.934 1.00 41.04 C
ATOM 22 P G A1194 48.869 126.354 125.179 1.00 41.01 P
ATOM 23 OP1 G A1194 48.384 127.741 125.424 1.00 39.43 O
ATOM 24 OP2 G A1194 50.027 125.827 125.943 1.00 41.09 O
ATOM 25 O5' G A1194 47.661 125.339 125.383 1.00 39.96 O
TER
ATOM 1 O3' C B2011 44.599 128.279 115.787 1.00 39.01 O
ATOM 2 P C B2012 45.386 126.889 115.641 1.00 39.86 P
ATOM 3 OP1 C B2012 46.795 127.132 116.036 1.00 39.70 O
ATOM 4 OP2 C B2012 45.091 126.312 114.313 1.00 40.52 O
ATOM 5 O5' C B2012 44.694 125.946 116.715 1.00 38.61 O
ATOM 6 C5' C B2012 44.695 126.293 118.102 1.00 38.96 C
ATOM 7 C4' C B2012 43.976 125.235 118.889 1.00 39.09 C
ATOM 8 O4' C B2012 42.589 125.179 118.478 1.00 39.32 O
ATOM 9 C3' C B2012 44.503 123.838 118.658 1.00 38.60 C
ATOM 10 O3' C B2012 45.612 123.624 119.517 1.00 38.08 O
ATOM 11 C2' C B2012 43.299 122.962 118.989 1.00 40.30 C
ATOM 12 O2' C B2012 43.150 122.707 120.372 1.00 42.23 O
ATOM 13 C1' C B2012 42.139 123.840 118.511 1.00 39.62 C
ATOM 14 N1 C B2012 41.590 123.499 117.189 1.00 39.88 N
ATOM 15 C2 C B2012 40.607 122.508 117.106 1.00 39.75 C
ATOM 16 O2 C B2012 40.249 121.934 118.140 1.00 41.74 O
ATOM 17 N3 C B2012 40.072 122.204 115.905 1.00 38.42 N
ATOM 18 C4 C B2012 40.487 122.844 114.812 1.00 38.10 C
ATOM 19 N4 C B2012 39.929 122.516 113.651 1.00 37.73 N
ATOM 20 C5 C B2012 41.495 123.850 114.864 1.00 38.11 C
ATOM 21 C6 C B2012 42.016 124.142 116.060 1.00 38.56 C
ATOM 22 P A B2013 46.518 122.322 119.337 1.00 38.98 P
ATOM 23 OP1 A B2013 47.390 122.209 120.522 1.00 40.38 O
ATOM 24 OP2 A B2013 47.119 122.370 117.988 1.00 39.25 O
ATOM 25 O5' A B2013 45.472 121.128 119.380 1.00 39.14 O
TER
Atoms:
C4: (49.413,124.672,116.730)
N3: (48.655,125.662,117.301)
OP1: (52.234,121.292,120.564)
OP2: (54.235,122.889,120.824)
C2: (48.632,126.030,118.621)
C1': (49.545,125.694,120.856)
C3': (49.901,125.131,123.102)
O5': (51.955,123.511,121.633)
O4': (50.882,126.041,121.150)
C5': (52.337,124.631,122.446)
P: (52.967,122.321,121.345)
C4': (51.207,125.630,122.503)
C2': (49.163,124.620,121.874)
O2': (47.764,124.539,122.059)
N1: (49.480,125.314,119.438)
O4: (49.355,124.490,115.516)
O2: (47.910,126.926,119.032)
C6: (50.250,124.298,118.934)
C5: (50.246,123.962,117.644)
O3': (49.211,126.262,123.617)
N3: (48.655,125.662,117.301)
OP1: (52.234,121.292,120.564)
OP2: (54.235,122.889,120.824)
C2: (48.632,126.030,118.621)
C1': (49.545,125.694,120.856)
C3': (49.901,125.131,123.102)
O5': (51.955,123.511,121.633)
O4': (50.882,126.041,121.150)
C5': (52.337,124.631,122.446)
P: (52.967,122.321,121.345)
C4': (51.207,125.630,122.503)
C2': (49.163,124.620,121.874)
O2': (47.764,124.539,122.059)
N1: (49.480,125.314,119.438)
O4: (49.355,124.490,115.516)
O2: (47.910,126.926,119.032)
C6: (50.250,124.298,118.934)
C5: (50.246,123.962,117.644)
O3': (49.211,126.262,123.617)
C2: (40.607,122.508,117.106)
OP1: (46.795,127.132,116.036)
OP2: (45.091,126.312,114.313)
C4: (40.487,122.844,114.812)
O5': (44.694,125.946,116.715)
C3': (44.503,123.838,118.658)
C1': (42.139,123.840,118.511)
O4': (42.589,125.179,118.478)
C5': (44.695,126.293,118.102)
P: (45.386,126.889,115.641)
O2: (40.249,121.934,118.140)
C4': (43.976,125.235,118.889)
C2': (43.299,122.962,118.989)
O2': (43.150,122.707,120.372)
N1: (41.590,123.499,117.189)
N3: (40.072,122.204,115.905)
N4: (39.929,122.516,113.651)
C6: (42.016,124.142,116.060)
C5: (41.495,123.850,114.864)
O3': (45.612,123.624,119.517)
OP1: (46.795,127.132,116.036)
OP2: (45.091,126.312,114.313)
C4: (40.487,122.844,114.812)
O5': (44.694,125.946,116.715)
C3': (44.503,123.838,118.658)
C1': (42.139,123.840,118.511)
O4': (42.589,125.179,118.478)
C5': (44.695,126.293,118.102)
P: (45.386,126.889,115.641)
O2: (40.249,121.934,118.140)
C4': (43.976,125.235,118.889)
C2': (43.299,122.962,118.989)
O2': (43.150,122.707,120.372)
N1: (41.590,123.499,117.189)
N3: (40.072,122.204,115.905)
N4: (39.929,122.516,113.651)
C6: (42.016,124.142,116.060)
C5: (41.495,123.850,114.864)
O3': (45.612,123.624,119.517)
Image (generated by PyMOL):