Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0577:0575
Extra
PDB:
ATOM 1 O3' G A 576 -7.798 88.599 106.595 1.00 65.22 O
ATOM 2 P U A 577 -8.081 89.653 105.409 1.00 65.74 P
ATOM 3 OP1 U A 577 -8.640 88.928 104.236 1.00 65.49 O
ATOM 4 OP2 U A 577 -6.874 90.494 105.238 1.00 67.84 O
ATOM 5 O5' U A 577 -9.206 90.602 106.021 1.00 65.41 O
ATOM 6 C5' U A 577 -10.527 90.101 106.332 1.00 65.00 C
ATOM 7 C4' U A 577 -11.078 90.798 107.558 1.00 64.67 C
ATOM 8 O4' U A 577 -10.428 90.307 108.761 1.00 64.75 O
ATOM 9 C3' U A 577 -10.850 92.295 107.591 1.00 64.72 C
ATOM 10 O3' U A 577 -11.816 92.979 106.800 1.00 66.32 O
ATOM 11 C2' U A 577 -10.928 92.615 109.080 1.00 64.51 C
ATOM 12 O2' U A 577 -12.246 92.726 109.565 1.00 64.70 O
ATOM 13 C1' U A 577 -10.286 91.368 109.700 1.00 64.66 C
ATOM 14 N1 U A 577 -8.862 91.499 110.075 1.00 64.37 N
ATOM 15 C2 U A 577 -8.502 92.496 110.985 1.00 64.67 C
ATOM 16 O2 U A 577 -9.304 93.274 111.488 1.00 64.20 O
ATOM 17 N3 U A 577 -7.162 92.549 111.284 1.00 65.25 N
ATOM 18 C4 U A 577 -6.160 91.735 110.787 1.00 66.07 C
ATOM 19 O4 U A 577 -4.994 91.916 111.153 1.00 66.09 O
ATOM 20 C5 U A 577 -6.604 90.734 109.866 1.00 64.78 C
ATOM 21 C6 U A 577 -7.902 90.652 109.548 1.00 64.97 C
ATOM 22 P A A 578 -11.410 94.341 106.051 1.00 68.40 P
ATOM 23 OP1 A A 578 -12.586 94.849 105.299 1.00 69.65 O
ATOM 24 OP2 A A 578 -10.128 94.116 105.334 1.00 69.40 O
ATOM 25 O5' A A 578 -11.145 95.352 107.247 1.00 65.71 O
TER
ATOM 1 O3' C B 574 -13.383 88.339 114.394 1.00 70.89 O
ATOM 2 P A B 575 -13.043 88.857 112.910 1.00 71.73 P
ATOM 3 OP1 A B 575 -12.430 90.207 113.020 1.00 71.71 O
ATOM 4 OP2 A B 575 -14.270 88.677 112.092 1.00 72.69 O
ATOM 5 O5' A B 575 -11.955 87.829 112.363 1.00 70.09 O
ATOM 6 C5' A B 575 -11.761 87.657 110.944 1.00 69.87 C
ATOM 7 C4' A B 575 -10.308 87.374 110.630 1.00 68.00 C
ATOM 8 O4' A B 575 -9.493 88.478 111.109 1.00 67.76 O
ATOM 9 C3' A B 575 -9.705 86.114 111.238 1.00 67.12 C
ATOM 10 O3' A B 575 -8.755 85.601 110.318 1.00 67.50 O
ATOM 11 C2' A B 575 -9.008 86.644 112.489 1.00 67.44 C
ATOM 12 O2' A B 575 -7.924 85.836 112.907 1.00 67.31 O
ATOM 13 C1' A B 575 -8.502 87.995 111.994 1.00 66.59 C
ATOM 14 N9 A B 575 -8.283 89.006 113.031 1.00 65.53 N
ATOM 15 C8 A B 575 -9.227 89.726 113.721 1.00 65.71 C
ATOM 16 N7 A B 575 -8.721 90.605 114.551 1.00 65.06 N
ATOM 17 C5 A B 575 -7.349 90.447 114.410 1.00 64.66 C
ATOM 18 C6 A B 575 -6.253 91.098 115.013 1.00 64.70 C
ATOM 19 N6 A B 575 -6.375 92.071 115.922 1.00 64.58 N
ATOM 20 N1 A B 575 -5.013 90.709 114.646 1.00 64.07 N
ATOM 21 C2 A B 575 -4.892 89.729 113.740 1.00 65.15 C
ATOM 22 N3 A B 575 -5.843 89.040 113.106 1.00 64.93 N
ATOM 23 C4 A B 575 -7.064 89.455 113.488 1.00 65.26 C
ATOM 24 P G B 576 -9.065 84.238 109.528 1.00 69.87 P
ATOM 25 OP1 G B 576 -10.513 83.954 109.670 1.00 73.28 O
ATOM 26 OP2 G B 576 -8.075 83.216 109.945 1.00 70.70 O
ATOM 27 O5' G B 576 -8.814 84.604 107.994 1.00 70.50 O
TER
ATOM 2 P U A 577 -8.081 89.653 105.409 1.00 65.74 P
ATOM 3 OP1 U A 577 -8.640 88.928 104.236 1.00 65.49 O
ATOM 4 OP2 U A 577 -6.874 90.494 105.238 1.00 67.84 O
ATOM 5 O5' U A 577 -9.206 90.602 106.021 1.00 65.41 O
ATOM 6 C5' U A 577 -10.527 90.101 106.332 1.00 65.00 C
ATOM 7 C4' U A 577 -11.078 90.798 107.558 1.00 64.67 C
ATOM 8 O4' U A 577 -10.428 90.307 108.761 1.00 64.75 O
ATOM 9 C3' U A 577 -10.850 92.295 107.591 1.00 64.72 C
ATOM 10 O3' U A 577 -11.816 92.979 106.800 1.00 66.32 O
ATOM 11 C2' U A 577 -10.928 92.615 109.080 1.00 64.51 C
ATOM 12 O2' U A 577 -12.246 92.726 109.565 1.00 64.70 O
ATOM 13 C1' U A 577 -10.286 91.368 109.700 1.00 64.66 C
ATOM 14 N1 U A 577 -8.862 91.499 110.075 1.00 64.37 N
ATOM 15 C2 U A 577 -8.502 92.496 110.985 1.00 64.67 C
ATOM 16 O2 U A 577 -9.304 93.274 111.488 1.00 64.20 O
ATOM 17 N3 U A 577 -7.162 92.549 111.284 1.00 65.25 N
ATOM 18 C4 U A 577 -6.160 91.735 110.787 1.00 66.07 C
ATOM 19 O4 U A 577 -4.994 91.916 111.153 1.00 66.09 O
ATOM 20 C5 U A 577 -6.604 90.734 109.866 1.00 64.78 C
ATOM 21 C6 U A 577 -7.902 90.652 109.548 1.00 64.97 C
ATOM 22 P A A 578 -11.410 94.341 106.051 1.00 68.40 P
ATOM 23 OP1 A A 578 -12.586 94.849 105.299 1.00 69.65 O
ATOM 24 OP2 A A 578 -10.128 94.116 105.334 1.00 69.40 O
ATOM 25 O5' A A 578 -11.145 95.352 107.247 1.00 65.71 O
TER
ATOM 1 O3' C B 574 -13.383 88.339 114.394 1.00 70.89 O
ATOM 2 P A B 575 -13.043 88.857 112.910 1.00 71.73 P
ATOM 3 OP1 A B 575 -12.430 90.207 113.020 1.00 71.71 O
ATOM 4 OP2 A B 575 -14.270 88.677 112.092 1.00 72.69 O
ATOM 5 O5' A B 575 -11.955 87.829 112.363 1.00 70.09 O
ATOM 6 C5' A B 575 -11.761 87.657 110.944 1.00 69.87 C
ATOM 7 C4' A B 575 -10.308 87.374 110.630 1.00 68.00 C
ATOM 8 O4' A B 575 -9.493 88.478 111.109 1.00 67.76 O
ATOM 9 C3' A B 575 -9.705 86.114 111.238 1.00 67.12 C
ATOM 10 O3' A B 575 -8.755 85.601 110.318 1.00 67.50 O
ATOM 11 C2' A B 575 -9.008 86.644 112.489 1.00 67.44 C
ATOM 12 O2' A B 575 -7.924 85.836 112.907 1.00 67.31 O
ATOM 13 C1' A B 575 -8.502 87.995 111.994 1.00 66.59 C
ATOM 14 N9 A B 575 -8.283 89.006 113.031 1.00 65.53 N
ATOM 15 C8 A B 575 -9.227 89.726 113.721 1.00 65.71 C
ATOM 16 N7 A B 575 -8.721 90.605 114.551 1.00 65.06 N
ATOM 17 C5 A B 575 -7.349 90.447 114.410 1.00 64.66 C
ATOM 18 C6 A B 575 -6.253 91.098 115.013 1.00 64.70 C
ATOM 19 N6 A B 575 -6.375 92.071 115.922 1.00 64.58 N
ATOM 20 N1 A B 575 -5.013 90.709 114.646 1.00 64.07 N
ATOM 21 C2 A B 575 -4.892 89.729 113.740 1.00 65.15 C
ATOM 22 N3 A B 575 -5.843 89.040 113.106 1.00 64.93 N
ATOM 23 C4 A B 575 -7.064 89.455 113.488 1.00 65.26 C
ATOM 24 P G B 576 -9.065 84.238 109.528 1.00 69.87 P
ATOM 25 OP1 G B 576 -10.513 83.954 109.670 1.00 73.28 O
ATOM 26 OP2 G B 576 -8.075 83.216 109.945 1.00 70.70 O
ATOM 27 O5' G B 576 -8.814 84.604 107.994 1.00 70.50 O
TER
Atoms:
C4: (-6.160,91.735,110.787)
N3: (-7.162,92.549,111.284)
OP1: (-8.640,88.928,104.236)
OP2: (-6.874,90.494,105.238)
C2: (-8.502,92.496,110.985)
C1': (-10.286,91.368,109.700)
C3': (-10.850,92.295,107.591)
O5': (-9.206,90.602,106.021)
O4': (-10.428,90.307,108.761)
C5': (-10.527,90.101,106.332)
P: (-8.081,89.653,105.409)
C4': (-11.078,90.798,107.558)
C2': (-10.928,92.615,109.080)
O2': (-12.246,92.726,109.565)
N1: (-8.862,91.499,110.075)
O4: (-4.994,91.916,111.153)
O2: (-9.304,93.274,111.488)
C6: (-7.902,90.652,109.548)
C5: (-6.604,90.734,109.866)
O3': (-11.816,92.979,106.800)
N3: (-7.162,92.549,111.284)
OP1: (-8.640,88.928,104.236)
OP2: (-6.874,90.494,105.238)
C2: (-8.502,92.496,110.985)
C1': (-10.286,91.368,109.700)
C3': (-10.850,92.295,107.591)
O5': (-9.206,90.602,106.021)
O4': (-10.428,90.307,108.761)
C5': (-10.527,90.101,106.332)
P: (-8.081,89.653,105.409)
C4': (-11.078,90.798,107.558)
C2': (-10.928,92.615,109.080)
O2': (-12.246,92.726,109.565)
N1: (-8.862,91.499,110.075)
O4: (-4.994,91.916,111.153)
O2: (-9.304,93.274,111.488)
C6: (-7.902,90.652,109.548)
C5: (-6.604,90.734,109.866)
O3': (-11.816,92.979,106.800)
OP1: (-12.430,90.207,113.020)
OP2: (-14.270,88.677,112.092)
C3': (-9.705,86.114,111.238)
C1': (-8.502,87.995,111.994)
C5': (-11.761,87.657,110.944)
O4': (-9.493,88.478,111.109)
C8: (-9.227,89.726,113.721)
O2': (-7.924,85.836,112.907)
C6: (-6.253,91.098,115.013)
C5: (-7.349,90.447,114.410)
C4: (-7.064,89.455,113.488)
P: (-13.043,88.857,112.910)
C4': (-10.308,87.374,110.630)
C2': (-9.008,86.644,112.489)
C2: (-4.892,89.729,113.740)
N1: (-5.013,90.709,114.646)
N3: (-5.843,89.040,113.106)
N6: (-6.375,92.071,115.922)
N7: (-8.721,90.605,114.551)
N9: (-8.283,89.006,113.031)
O5': (-11.955,87.829,112.363)
O3': (-8.755,85.601,110.318)
OP2: (-14.270,88.677,112.092)
C3': (-9.705,86.114,111.238)
C1': (-8.502,87.995,111.994)
C5': (-11.761,87.657,110.944)
O4': (-9.493,88.478,111.109)
C8: (-9.227,89.726,113.721)
O2': (-7.924,85.836,112.907)
C6: (-6.253,91.098,115.013)
C5: (-7.349,90.447,114.410)
C4: (-7.064,89.455,113.488)
P: (-13.043,88.857,112.910)
C4': (-10.308,87.374,110.630)
C2': (-9.008,86.644,112.489)
C2: (-4.892,89.729,113.740)
N1: (-5.013,90.709,114.646)
N3: (-5.843,89.040,113.106)
N6: (-6.375,92.071,115.922)
N7: (-8.721,90.605,114.551)
N9: (-8.283,89.006,113.031)
O5': (-11.955,87.829,112.363)
O3': (-8.755,85.601,110.318)
Image (generated by PyMOL):