Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02079:02105
Extra
PDB:
ATOM 1 O3' C A2078 109.463 110.994 31.918 1.00 57.81 O
ATOM 2 P U A2079 110.938 111.113 31.291 1.00 59.34 P
ATOM 3 OP1 U A2079 111.630 112.245 31.958 1.00 59.10 O
ATOM 4 OP2 U A2079 110.802 111.098 29.806 1.00 57.80 O
ATOM 5 O5' U A2079 111.687 109.782 31.718 1.00 58.19 O
ATOM 6 C5' U A2079 112.924 109.427 31.091 1.00 60.46 C
ATOM 7 C4' U A2079 113.508 108.222 31.760 1.00 61.65 C
ATOM 8 O4' U A2079 114.060 108.596 33.048 1.00 61.09 O
ATOM 9 C3' U A2079 112.499 107.118 32.032 1.00 63.24 C
ATOM 10 O3' U A2079 113.168 105.869 31.953 1.00 67.40 O
ATOM 11 C2' U A2079 112.092 107.412 33.473 1.00 62.60 C
ATOM 12 O2' U A2079 111.605 106.284 34.163 1.00 64.35 O
ATOM 13 C1' U A2079 113.429 107.848 34.059 1.00 60.87 C
ATOM 14 N1 U A2079 113.371 108.660 35.281 1.00 59.74 N
ATOM 15 C2 U A2079 113.782 108.057 36.453 1.00 60.30 C
ATOM 16 O2 U A2079 114.119 106.882 36.513 1.00 61.66 O
ATOM 17 N3 U A2079 113.782 108.871 37.556 1.00 60.16 N
ATOM 18 C4 U A2079 113.408 110.192 37.612 1.00 60.24 C
ATOM 19 O4 U A2079 113.533 110.807 38.675 1.00 61.50 O
ATOM 20 C5 U A2079 112.955 110.738 36.365 1.00 59.04 C
ATOM 21 C6 U A2079 112.952 109.972 35.270 1.00 58.86 C
ATOM 22 P G A2080 113.575 105.271 30.519 1.00 69.51 P
ATOM 23 OP1 G A2080 112.592 105.786 29.524 1.00 68.04 O
ATOM 24 OP2 G A2080 113.756 103.800 30.680 1.00 69.61 O
ATOM 25 O5' G A2080 115.006 105.930 30.238 1.00 72.37 O
TER
ATOM 1 O3' A B2104 116.705 108.190 39.137 1.00 69.15 O
ATOM 2 P C B2105 115.994 107.122 40.113 1.00 69.17 P
ATOM 3 OP1 C B2105 116.834 105.889 40.184 1.00 69.49 O
ATOM 4 OP2 C B2105 114.577 107.006 39.684 1.00 68.39 O
ATOM 5 O5' C B2105 116.024 107.864 41.528 1.00 66.88 O
ATOM 6 C5' C B2105 116.956 107.469 42.555 1.00 64.55 C
ATOM 7 C4' C B2105 117.473 108.674 43.313 1.00 62.27 C
ATOM 8 O4' C B2105 118.147 109.578 42.402 1.00 60.43 O
ATOM 9 C3' C B2105 116.455 109.587 43.971 1.00 62.00 C
ATOM 10 O3' C B2105 115.949 109.072 45.189 1.00 61.80 O
ATOM 11 C2' C B2105 117.277 110.845 44.215 1.00 61.00 C
ATOM 12 O2' C B2105 118.127 110.758 45.341 1.00 60.87 O
ATOM 13 C1' C B2105 118.128 110.889 42.948 1.00 59.59 C
ATOM 14 N1 C B2105 117.591 111.827 41.949 1.00 58.11 N
ATOM 15 C2 C B2105 117.655 113.209 42.222 1.00 57.62 C
ATOM 16 O2 C B2105 118.144 113.592 43.302 1.00 55.11 O
ATOM 17 N3 C B2105 117.179 114.084 41.306 1.00 58.18 N
ATOM 18 C4 C B2105 116.649 113.632 40.162 1.00 59.57 C
ATOM 19 N4 C B2105 116.187 114.531 39.291 1.00 59.51 N
ATOM 20 C5 C B2105 116.567 112.236 39.864 1.00 58.61 C
ATOM 21 C6 C B2105 117.044 111.379 40.777 1.00 58.23 C
ATOM 22 P A B2106 114.454 109.441 45.633 1.00 61.75 P
ATOM 23 OP1 A B2106 114.268 108.930 47.015 1.00 63.74 O
ATOM 24 OP2 A B2106 113.537 108.995 44.553 1.00 61.27 O
ATOM 25 O5' A B2106 114.449 111.030 45.698 1.00 58.38 O
TER
ATOM 2 P U A2079 110.938 111.113 31.291 1.00 59.34 P
ATOM 3 OP1 U A2079 111.630 112.245 31.958 1.00 59.10 O
ATOM 4 OP2 U A2079 110.802 111.098 29.806 1.00 57.80 O
ATOM 5 O5' U A2079 111.687 109.782 31.718 1.00 58.19 O
ATOM 6 C5' U A2079 112.924 109.427 31.091 1.00 60.46 C
ATOM 7 C4' U A2079 113.508 108.222 31.760 1.00 61.65 C
ATOM 8 O4' U A2079 114.060 108.596 33.048 1.00 61.09 O
ATOM 9 C3' U A2079 112.499 107.118 32.032 1.00 63.24 C
ATOM 10 O3' U A2079 113.168 105.869 31.953 1.00 67.40 O
ATOM 11 C2' U A2079 112.092 107.412 33.473 1.00 62.60 C
ATOM 12 O2' U A2079 111.605 106.284 34.163 1.00 64.35 O
ATOM 13 C1' U A2079 113.429 107.848 34.059 1.00 60.87 C
ATOM 14 N1 U A2079 113.371 108.660 35.281 1.00 59.74 N
ATOM 15 C2 U A2079 113.782 108.057 36.453 1.00 60.30 C
ATOM 16 O2 U A2079 114.119 106.882 36.513 1.00 61.66 O
ATOM 17 N3 U A2079 113.782 108.871 37.556 1.00 60.16 N
ATOM 18 C4 U A2079 113.408 110.192 37.612 1.00 60.24 C
ATOM 19 O4 U A2079 113.533 110.807 38.675 1.00 61.50 O
ATOM 20 C5 U A2079 112.955 110.738 36.365 1.00 59.04 C
ATOM 21 C6 U A2079 112.952 109.972 35.270 1.00 58.86 C
ATOM 22 P G A2080 113.575 105.271 30.519 1.00 69.51 P
ATOM 23 OP1 G A2080 112.592 105.786 29.524 1.00 68.04 O
ATOM 24 OP2 G A2080 113.756 103.800 30.680 1.00 69.61 O
ATOM 25 O5' G A2080 115.006 105.930 30.238 1.00 72.37 O
TER
ATOM 1 O3' A B2104 116.705 108.190 39.137 1.00 69.15 O
ATOM 2 P C B2105 115.994 107.122 40.113 1.00 69.17 P
ATOM 3 OP1 C B2105 116.834 105.889 40.184 1.00 69.49 O
ATOM 4 OP2 C B2105 114.577 107.006 39.684 1.00 68.39 O
ATOM 5 O5' C B2105 116.024 107.864 41.528 1.00 66.88 O
ATOM 6 C5' C B2105 116.956 107.469 42.555 1.00 64.55 C
ATOM 7 C4' C B2105 117.473 108.674 43.313 1.00 62.27 C
ATOM 8 O4' C B2105 118.147 109.578 42.402 1.00 60.43 O
ATOM 9 C3' C B2105 116.455 109.587 43.971 1.00 62.00 C
ATOM 10 O3' C B2105 115.949 109.072 45.189 1.00 61.80 O
ATOM 11 C2' C B2105 117.277 110.845 44.215 1.00 61.00 C
ATOM 12 O2' C B2105 118.127 110.758 45.341 1.00 60.87 O
ATOM 13 C1' C B2105 118.128 110.889 42.948 1.00 59.59 C
ATOM 14 N1 C B2105 117.591 111.827 41.949 1.00 58.11 N
ATOM 15 C2 C B2105 117.655 113.209 42.222 1.00 57.62 C
ATOM 16 O2 C B2105 118.144 113.592 43.302 1.00 55.11 O
ATOM 17 N3 C B2105 117.179 114.084 41.306 1.00 58.18 N
ATOM 18 C4 C B2105 116.649 113.632 40.162 1.00 59.57 C
ATOM 19 N4 C B2105 116.187 114.531 39.291 1.00 59.51 N
ATOM 20 C5 C B2105 116.567 112.236 39.864 1.00 58.61 C
ATOM 21 C6 C B2105 117.044 111.379 40.777 1.00 58.23 C
ATOM 22 P A B2106 114.454 109.441 45.633 1.00 61.75 P
ATOM 23 OP1 A B2106 114.268 108.930 47.015 1.00 63.74 O
ATOM 24 OP2 A B2106 113.537 108.995 44.553 1.00 61.27 O
ATOM 25 O5' A B2106 114.449 111.030 45.698 1.00 58.38 O
TER
Atoms:
C4: (113.408,110.192,37.612)
N3: (113.782,108.871,37.556)
OP1: (111.630,112.245,31.958)
OP2: (110.802,111.098,29.806)
C2: (113.782,108.057,36.453)
C1': (113.429,107.848,34.059)
C3': (112.499,107.118,32.032)
O5': (111.687,109.782,31.718)
O4': (114.060,108.596,33.048)
C5': (112.924,109.427,31.091)
P: (110.938,111.113,31.291)
C4': (113.508,108.222,31.760)
C2': (112.092,107.412,33.473)
O2': (111.605,106.284,34.163)
N1: (113.371,108.660,35.281)
O4: (113.533,110.807,38.675)
O2: (114.119,106.882,36.513)
C6: (112.952,109.972,35.270)
C5: (112.955,110.738,36.365)
O3': (113.168,105.869,31.953)
N3: (113.782,108.871,37.556)
OP1: (111.630,112.245,31.958)
OP2: (110.802,111.098,29.806)
C2: (113.782,108.057,36.453)
C1': (113.429,107.848,34.059)
C3': (112.499,107.118,32.032)
O5': (111.687,109.782,31.718)
O4': (114.060,108.596,33.048)
C5': (112.924,109.427,31.091)
P: (110.938,111.113,31.291)
C4': (113.508,108.222,31.760)
C2': (112.092,107.412,33.473)
O2': (111.605,106.284,34.163)
N1: (113.371,108.660,35.281)
O4: (113.533,110.807,38.675)
O2: (114.119,106.882,36.513)
C6: (112.952,109.972,35.270)
C5: (112.955,110.738,36.365)
O3': (113.168,105.869,31.953)
C2: (117.655,113.209,42.222)
OP1: (116.834,105.889,40.184)
OP2: (114.577,107.006,39.684)
C4: (116.649,113.632,40.162)
O5': (116.024,107.864,41.528)
C3': (116.455,109.587,43.971)
C1': (118.128,110.889,42.948)
O4': (118.147,109.578,42.402)
C5': (116.956,107.469,42.555)
P: (115.994,107.122,40.113)
O2: (118.144,113.592,43.302)
C4': (117.473,108.674,43.313)
C2': (117.277,110.845,44.215)
O2': (118.127,110.758,45.341)
N1: (117.591,111.827,41.949)
N3: (117.179,114.084,41.306)
N4: (116.187,114.531,39.291)
C6: (117.044,111.379,40.777)
C5: (116.567,112.236,39.864)
O3': (115.949,109.072,45.189)
OP1: (116.834,105.889,40.184)
OP2: (114.577,107.006,39.684)
C4: (116.649,113.632,40.162)
O5': (116.024,107.864,41.528)
C3': (116.455,109.587,43.971)
C1': (118.128,110.889,42.948)
O4': (118.147,109.578,42.402)
C5': (116.956,107.469,42.555)
P: (115.994,107.122,40.113)
O2: (118.144,113.592,43.302)
C4': (117.473,108.674,43.313)
C2': (117.277,110.845,44.215)
O2': (118.127,110.758,45.341)
N1: (117.591,111.827,41.949)
N3: (117.179,114.084,41.306)
N4: (116.187,114.531,39.291)
C6: (117.044,111.379,40.777)
C5: (116.567,112.236,39.864)
O3': (115.949,109.072,45.189)
Image (generated by PyMOL):