Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BBV:N5:N4
Extra
PDB:
ATOM 1 O3' A A 4 -3.630 -7.864 106.487 1.00 48.39 O
ATOM 2 P U A 5 -4.918 -7.036 106.037 1.00 54.16 P
ATOM 3 OP1 U A 5 -6.143 -7.837 106.277 1.00 49.61 O
ATOM 4 OP2 U A 5 -4.758 -6.576 104.640 1.00 50.05 O
ATOM 5 O5' U A 5 -4.870 -5.776 107.029 1.00 47.95 O
ATOM 6 C5' U A 5 -4.403 -6.010 108.369 1.00 40.54 C
ATOM 7 C4' U A 5 -4.199 -4.695 109.140 1.00 38.71 C
ATOM 8 O4' U A 5 -2.902 -4.131 108.772 1.00 38.16 O
ATOM 9 C3' U A 5 -5.200 -3.576 108.869 1.00 41.68 C
ATOM 10 O3' U A 5 -6.377 -3.760 109.658 1.00 43.86 O
ATOM 11 C2' U A 5 -4.392 -2.337 109.241 1.00 38.50 C
ATOM 12 O2' U A 5 -4.493 -2.062 110.627 1.00 36.42 O
ATOM 13 C1' U A 5 -2.974 -2.703 108.781 1.00 36.31 C
ATOM 14 N1 U A 5 -2.604 -2.185 107.436 1.00 33.70 N
ATOM 15 C2 U A 5 -1.607 -1.245 107.400 1.00 36.74 C
ATOM 16 O2 U A 5 -1.034 -0.856 108.404 1.00 35.18 O
ATOM 17 N3 U A 5 -1.273 -0.752 106.154 1.00 37.24 N
ATOM 18 C4 U A 5 -1.848 -1.127 104.946 1.00 39.85 C
ATOM 19 O4 U A 5 -1.465 -0.608 103.896 1.00 40.52 O
ATOM 20 C5 U A 5 -2.879 -2.130 105.074 1.00 38.62 C
ATOM 21 C6 U A 5 -3.227 -2.624 106.280 1.00 36.57 C
ATOM 22 P A A 6 -7.526 -2.646 109.719 1.00 52.92 P
ATOM 23 OP1 A A 6 -8.541 -3.025 110.728 1.00 47.06 O
ATOM 24 OP2 A A 6 -8.061 -2.385 108.368 1.00 46.05 O
ATOM 25 O5' A A 6 -6.762 -1.333 110.230 1.00 50.70 O
TER
ATOM 1 O3' U B 3 -0.826 -8.832 101.650 1.00 42.14 O
ATOM 2 P A B 4 -1.914 -7.712 102.006 1.00 49.31 P
ATOM 3 OP1 A B 4 -3.276 -8.239 101.778 1.00 49.43 O
ATOM 4 OP2 A B 4 -1.607 -6.463 101.270 1.00 45.81 O
ATOM 5 O5' A B 4 -1.682 -7.453 103.585 1.00 46.08 O
ATOM 6 C5' A B 4 -1.188 -8.545 104.381 1.00 47.74 C
ATOM 7 C4' A B 4 -1.286 -8.266 105.901 1.00 46.76 C
ATOM 8 O4' A B 4 -0.006 -7.671 106.349 1.00 48.02 O
ATOM 9 C3' A B 4 -2.339 -7.269 106.365 1.00 50.55 C
ATOM 10 O3' A B 4 -3.630 -7.864 106.487 1.00 48.39 O
ATOM 11 C2' A B 4 -1.802 -6.799 107.706 1.00 48.70 C
ATOM 12 O2' A B 4 -2.188 -7.680 108.751 1.00 44.89 O
ATOM 13 C1' A B 4 -0.297 -6.763 107.443 1.00 44.79 C
ATOM 14 N9 A B 4 0.187 -5.367 107.165 1.00 38.45 N
ATOM 15 C8 A B 4 0.514 -4.414 108.083 1.00 37.69 C
ATOM 16 N7 A B 4 0.902 -3.284 107.576 1.00 35.51 N
ATOM 17 C5 A B 4 0.834 -3.488 106.220 1.00 32.10 C
ATOM 18 C6 A B 4 1.115 -2.663 105.113 1.00 32.23 C
ATOM 19 N6 A B 4 1.544 -1.388 105.238 1.00 30.24 N
ATOM 20 N1 A B 4 0.943 -3.181 103.892 1.00 31.10 N
ATOM 21 C2 A B 4 0.516 -4.448 103.782 1.00 30.06 C
ATOM 22 N3 A B 4 0.219 -5.316 104.737 1.00 31.55 N
ATOM 23 C4 A B 4 0.402 -4.757 105.944 1.00 34.60 C
ATOM 24 P U B 5 -4.918 -7.036 106.037 1.00 54.16 P
ATOM 25 OP1 U B 5 -6.143 -7.837 106.277 1.00 49.61 O
ATOM 26 OP2 U B 5 -4.758 -6.576 104.640 1.00 50.05 O
ATOM 27 O5' U B 5 -4.870 -5.776 107.029 1.00 47.95 O
TER
ATOM 2 P U A 5 -4.918 -7.036 106.037 1.00 54.16 P
ATOM 3 OP1 U A 5 -6.143 -7.837 106.277 1.00 49.61 O
ATOM 4 OP2 U A 5 -4.758 -6.576 104.640 1.00 50.05 O
ATOM 5 O5' U A 5 -4.870 -5.776 107.029 1.00 47.95 O
ATOM 6 C5' U A 5 -4.403 -6.010 108.369 1.00 40.54 C
ATOM 7 C4' U A 5 -4.199 -4.695 109.140 1.00 38.71 C
ATOM 8 O4' U A 5 -2.902 -4.131 108.772 1.00 38.16 O
ATOM 9 C3' U A 5 -5.200 -3.576 108.869 1.00 41.68 C
ATOM 10 O3' U A 5 -6.377 -3.760 109.658 1.00 43.86 O
ATOM 11 C2' U A 5 -4.392 -2.337 109.241 1.00 38.50 C
ATOM 12 O2' U A 5 -4.493 -2.062 110.627 1.00 36.42 O
ATOM 13 C1' U A 5 -2.974 -2.703 108.781 1.00 36.31 C
ATOM 14 N1 U A 5 -2.604 -2.185 107.436 1.00 33.70 N
ATOM 15 C2 U A 5 -1.607 -1.245 107.400 1.00 36.74 C
ATOM 16 O2 U A 5 -1.034 -0.856 108.404 1.00 35.18 O
ATOM 17 N3 U A 5 -1.273 -0.752 106.154 1.00 37.24 N
ATOM 18 C4 U A 5 -1.848 -1.127 104.946 1.00 39.85 C
ATOM 19 O4 U A 5 -1.465 -0.608 103.896 1.00 40.52 O
ATOM 20 C5 U A 5 -2.879 -2.130 105.074 1.00 38.62 C
ATOM 21 C6 U A 5 -3.227 -2.624 106.280 1.00 36.57 C
ATOM 22 P A A 6 -7.526 -2.646 109.719 1.00 52.92 P
ATOM 23 OP1 A A 6 -8.541 -3.025 110.728 1.00 47.06 O
ATOM 24 OP2 A A 6 -8.061 -2.385 108.368 1.00 46.05 O
ATOM 25 O5' A A 6 -6.762 -1.333 110.230 1.00 50.70 O
TER
ATOM 1 O3' U B 3 -0.826 -8.832 101.650 1.00 42.14 O
ATOM 2 P A B 4 -1.914 -7.712 102.006 1.00 49.31 P
ATOM 3 OP1 A B 4 -3.276 -8.239 101.778 1.00 49.43 O
ATOM 4 OP2 A B 4 -1.607 -6.463 101.270 1.00 45.81 O
ATOM 5 O5' A B 4 -1.682 -7.453 103.585 1.00 46.08 O
ATOM 6 C5' A B 4 -1.188 -8.545 104.381 1.00 47.74 C
ATOM 7 C4' A B 4 -1.286 -8.266 105.901 1.00 46.76 C
ATOM 8 O4' A B 4 -0.006 -7.671 106.349 1.00 48.02 O
ATOM 9 C3' A B 4 -2.339 -7.269 106.365 1.00 50.55 C
ATOM 10 O3' A B 4 -3.630 -7.864 106.487 1.00 48.39 O
ATOM 11 C2' A B 4 -1.802 -6.799 107.706 1.00 48.70 C
ATOM 12 O2' A B 4 -2.188 -7.680 108.751 1.00 44.89 O
ATOM 13 C1' A B 4 -0.297 -6.763 107.443 1.00 44.79 C
ATOM 14 N9 A B 4 0.187 -5.367 107.165 1.00 38.45 N
ATOM 15 C8 A B 4 0.514 -4.414 108.083 1.00 37.69 C
ATOM 16 N7 A B 4 0.902 -3.284 107.576 1.00 35.51 N
ATOM 17 C5 A B 4 0.834 -3.488 106.220 1.00 32.10 C
ATOM 18 C6 A B 4 1.115 -2.663 105.113 1.00 32.23 C
ATOM 19 N6 A B 4 1.544 -1.388 105.238 1.00 30.24 N
ATOM 20 N1 A B 4 0.943 -3.181 103.892 1.00 31.10 N
ATOM 21 C2 A B 4 0.516 -4.448 103.782 1.00 30.06 C
ATOM 22 N3 A B 4 0.219 -5.316 104.737 1.00 31.55 N
ATOM 23 C4 A B 4 0.402 -4.757 105.944 1.00 34.60 C
ATOM 24 P U B 5 -4.918 -7.036 106.037 1.00 54.16 P
ATOM 25 OP1 U B 5 -6.143 -7.837 106.277 1.00 49.61 O
ATOM 26 OP2 U B 5 -4.758 -6.576 104.640 1.00 50.05 O
ATOM 27 O5' U B 5 -4.870 -5.776 107.029 1.00 47.95 O
TER
Atoms:
C4: (-1.848,-1.127,104.946)
N3: (-1.273,-0.752,106.154)
OP1: (-6.143,-7.837,106.277)
OP2: (-4.758,-6.576,104.640)
C2: (-1.607,-1.245,107.400)
C1': (-2.974,-2.703,108.781)
C3': (-5.200,-3.576,108.869)
O5': (-4.870,-5.776,107.029)
O4': (-2.902,-4.131,108.772)
C5': (-4.403,-6.010,108.369)
P: (-4.918,-7.036,106.037)
C4': (-4.199,-4.695,109.140)
C2': (-4.392,-2.337,109.241)
O2': (-4.493,-2.062,110.627)
N1: (-2.604,-2.185,107.436)
O4: (-1.465,-0.608,103.896)
O2: (-1.034,-0.856,108.404)
C6: (-3.227,-2.624,106.280)
C5: (-2.879,-2.130,105.074)
O3': (-6.377,-3.760,109.658)
N3: (-1.273,-0.752,106.154)
OP1: (-6.143,-7.837,106.277)
OP2: (-4.758,-6.576,104.640)
C2: (-1.607,-1.245,107.400)
C1': (-2.974,-2.703,108.781)
C3': (-5.200,-3.576,108.869)
O5': (-4.870,-5.776,107.029)
O4': (-2.902,-4.131,108.772)
C5': (-4.403,-6.010,108.369)
P: (-4.918,-7.036,106.037)
C4': (-4.199,-4.695,109.140)
C2': (-4.392,-2.337,109.241)
O2': (-4.493,-2.062,110.627)
N1: (-2.604,-2.185,107.436)
O4: (-1.465,-0.608,103.896)
O2: (-1.034,-0.856,108.404)
C6: (-3.227,-2.624,106.280)
C5: (-2.879,-2.130,105.074)
O3': (-6.377,-3.760,109.658)
OP1: (-3.276,-8.239,101.778)
OP2: (-1.607,-6.463,101.270)
C3': (-2.339,-7.269,106.365)
C1': (-0.297,-6.763,107.443)
C5': (-1.188,-8.545,104.381)
O4': (-0.006,-7.671,106.349)
C8: (0.514,-4.414,108.083)
O2': (-2.188,-7.680,108.751)
C6: (1.115,-2.663,105.113)
C5: (0.834,-3.488,106.220)
C4: (0.402,-4.757,105.944)
P: (-1.914,-7.712,102.006)
C4': (-1.286,-8.266,105.901)
C2': (-1.802,-6.799,107.706)
C2: (0.516,-4.448,103.782)
N1: (0.943,-3.181,103.892)
N3: (0.219,-5.316,104.737)
N6: (1.544,-1.388,105.238)
N7: (0.902,-3.284,107.576)
N9: (0.187,-5.367,107.165)
O5': (-1.682,-7.453,103.585)
O3': (-3.630,-7.864,106.487)
OP2: (-1.607,-6.463,101.270)
C3': (-2.339,-7.269,106.365)
C1': (-0.297,-6.763,107.443)
C5': (-1.188,-8.545,104.381)
O4': (-0.006,-7.671,106.349)
C8: (0.514,-4.414,108.083)
O2': (-2.188,-7.680,108.751)
C6: (1.115,-2.663,105.113)
C5: (0.834,-3.488,106.220)
C4: (0.402,-4.757,105.944)
P: (-1.914,-7.712,102.006)
C4': (-1.286,-8.266,105.901)
C2': (-1.802,-6.799,107.706)
C2: (0.516,-4.448,103.782)
N1: (0.943,-3.181,103.892)
N3: (0.219,-5.316,104.737)
N6: (1.544,-1.388,105.238)
N7: (0.902,-3.284,107.576)
N9: (0.187,-5.367,107.165)
O5': (-1.682,-7.453,103.585)
O3': (-3.630,-7.864,106.487)
Image (generated by PyMOL):