Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A59:A11
Extra
PDB:
ATOM 1 O3' U A 58 2.660 -23.072 19.928 1.00 42.52 O
ATOM 2 P G A 59 3.224 -21.824 19.071 1.00 41.50 P
ATOM 3 OP1 G A 59 2.883 -22.061 17.654 1.00 36.23 O
ATOM 4 OP2 G A 59 4.648 -21.611 19.436 1.00 39.86 O
ATOM 5 O5' G A 59 2.219 -20.700 19.635 1.00 39.29 O
ATOM 6 C5' G A 59 2.443 -19.396 19.452 1.00 42.90 C
ATOM 7 C4' G A 59 1.149 -18.590 19.207 1.00 49.07 C
ATOM 8 O4' G A 59 0.484 -18.992 17.950 1.00 53.68 O
ATOM 9 C3' G A 59 0.031 -18.668 20.241 1.00 49.07 C
ATOM 10 O3' G A 59 0.246 -17.830 21.393 1.00 51.93 O
ATOM 11 C2' G A 59 -1.088 -18.059 19.396 1.00 52.75 C
ATOM 12 O2' G A 59 -0.915 -16.625 19.296 1.00 50.87 O
ATOM 13 C1' G A 59 -0.919 -18.732 18.013 1.00 50.19 C
ATOM 14 N9 G A 59 -1.598 -20.002 17.840 1.00 52.85 N
ATOM 15 C8 G A 59 -0.909 -21.185 17.669 1.00 51.78 C
ATOM 16 N7 G A 59 -1.665 -22.224 17.560 1.00 52.56 N
ATOM 17 C5 G A 59 -2.960 -21.740 17.656 1.00 52.24 C
ATOM 18 C6 G A 59 -4.186 -22.491 17.611 1.00 51.29 C
ATOM 19 O6 G A 59 -4.312 -23.733 17.455 1.00 49.76 O
ATOM 20 N1 G A 59 -5.305 -21.657 17.753 1.00 51.19 N
ATOM 21 C2 G A 59 -5.185 -20.274 17.939 1.00 56.28 C
ATOM 22 N2 G A 59 -6.336 -19.586 18.075 1.00 53.67 N
ATOM 23 N3 G A 59 -4.029 -19.574 17.991 1.00 53.30 N
ATOM 24 C4 G A 59 -2.941 -20.372 17.845 1.00 52.24 C
ATOM 25 P C A 60 -0.413 -18.352 22.773 1.00 46.83 P
ATOM 26 OP1 C A 60 -0.637 -19.719 22.390 1.00 44.76 O
ATOM 27 OP2 C A 60 -1.553 -17.567 23.259 1.00 42.95 O
ATOM 28 O5' C A 60 0.850 -18.269 23.792 1.00 44.84 O
TER
ATOM 1 O3' G B 10 -9.956 -19.700 17.704 1.00 36.38 O
ATOM 2 P U B 11 -10.052 -21.305 17.493 1.00 39.46 P
ATOM 3 OP1 U B 11 -8.743 -21.789 16.999 1.00 36.46 O
ATOM 4 OP2 U B 11 -11.396 -21.647 16.922 1.00 29.92 O
ATOM 5 O5' U B 11 -10.162 -21.690 19.032 1.00 37.06 O
ATOM 6 C5' U B 11 -9.118 -21.607 19.929 1.00 39.96 C
ATOM 7 C4' U B 11 -9.733 -21.836 21.317 1.00 41.71 C
ATOM 8 O4' U B 11 -10.736 -20.802 21.640 1.00 36.81 O
ATOM 9 C3' U B 11 -10.455 -23.150 21.492 1.00 36.17 C
ATOM 10 O3' U B 11 -9.398 -24.001 21.849 1.00 40.90 O
ATOM 11 C2' U B 11 -11.326 -22.849 22.706 1.00 41.41 C
ATOM 12 O2' U B 11 -10.654 -23.025 23.959 1.00 42.72 O
ATOM 13 C1' U B 11 -11.640 -21.344 22.570 1.00 35.92 C
ATOM 14 N1 U B 11 -12.957 -21.084 22.099 1.00 36.18 N
ATOM 15 C2 U B 11 -13.780 -20.439 22.988 1.00 39.54 C
ATOM 16 O2 U B 11 -13.306 -20.155 24.063 1.00 40.29 O
ATOM 17 N3 U B 11 -15.087 -20.179 22.606 1.00 34.53 N
ATOM 18 C4 U B 11 -15.558 -20.505 21.355 1.00 36.79 C
ATOM 19 O4 U B 11 -16.702 -20.228 21.053 1.00 41.74 O
ATOM 20 C5 U B 11 -14.633 -21.167 20.466 1.00 38.00 C
ATOM 21 C6 U B 11 -13.384 -21.437 20.854 1.00 36.89 C
ATOM 22 P G B 12 -9.200 -25.535 21.310 1.00 45.49 P
ATOM 23 OP1 G B 12 -9.873 -25.537 20.000 1.00 38.28 O
ATOM 24 OP2 G B 12 -9.636 -26.394 22.413 1.00 48.43 O
ATOM 25 O5' G B 12 -7.626 -25.759 21.129 1.00 38.53 O
TER
ATOM 2 P G A 59 3.224 -21.824 19.071 1.00 41.50 P
ATOM 3 OP1 G A 59 2.883 -22.061 17.654 1.00 36.23 O
ATOM 4 OP2 G A 59 4.648 -21.611 19.436 1.00 39.86 O
ATOM 5 O5' G A 59 2.219 -20.700 19.635 1.00 39.29 O
ATOM 6 C5' G A 59 2.443 -19.396 19.452 1.00 42.90 C
ATOM 7 C4' G A 59 1.149 -18.590 19.207 1.00 49.07 C
ATOM 8 O4' G A 59 0.484 -18.992 17.950 1.00 53.68 O
ATOM 9 C3' G A 59 0.031 -18.668 20.241 1.00 49.07 C
ATOM 10 O3' G A 59 0.246 -17.830 21.393 1.00 51.93 O
ATOM 11 C2' G A 59 -1.088 -18.059 19.396 1.00 52.75 C
ATOM 12 O2' G A 59 -0.915 -16.625 19.296 1.00 50.87 O
ATOM 13 C1' G A 59 -0.919 -18.732 18.013 1.00 50.19 C
ATOM 14 N9 G A 59 -1.598 -20.002 17.840 1.00 52.85 N
ATOM 15 C8 G A 59 -0.909 -21.185 17.669 1.00 51.78 C
ATOM 16 N7 G A 59 -1.665 -22.224 17.560 1.00 52.56 N
ATOM 17 C5 G A 59 -2.960 -21.740 17.656 1.00 52.24 C
ATOM 18 C6 G A 59 -4.186 -22.491 17.611 1.00 51.29 C
ATOM 19 O6 G A 59 -4.312 -23.733 17.455 1.00 49.76 O
ATOM 20 N1 G A 59 -5.305 -21.657 17.753 1.00 51.19 N
ATOM 21 C2 G A 59 -5.185 -20.274 17.939 1.00 56.28 C
ATOM 22 N2 G A 59 -6.336 -19.586 18.075 1.00 53.67 N
ATOM 23 N3 G A 59 -4.029 -19.574 17.991 1.00 53.30 N
ATOM 24 C4 G A 59 -2.941 -20.372 17.845 1.00 52.24 C
ATOM 25 P C A 60 -0.413 -18.352 22.773 1.00 46.83 P
ATOM 26 OP1 C A 60 -0.637 -19.719 22.390 1.00 44.76 O
ATOM 27 OP2 C A 60 -1.553 -17.567 23.259 1.00 42.95 O
ATOM 28 O5' C A 60 0.850 -18.269 23.792 1.00 44.84 O
TER
ATOM 1 O3' G B 10 -9.956 -19.700 17.704 1.00 36.38 O
ATOM 2 P U B 11 -10.052 -21.305 17.493 1.00 39.46 P
ATOM 3 OP1 U B 11 -8.743 -21.789 16.999 1.00 36.46 O
ATOM 4 OP2 U B 11 -11.396 -21.647 16.922 1.00 29.92 O
ATOM 5 O5' U B 11 -10.162 -21.690 19.032 1.00 37.06 O
ATOM 6 C5' U B 11 -9.118 -21.607 19.929 1.00 39.96 C
ATOM 7 C4' U B 11 -9.733 -21.836 21.317 1.00 41.71 C
ATOM 8 O4' U B 11 -10.736 -20.802 21.640 1.00 36.81 O
ATOM 9 C3' U B 11 -10.455 -23.150 21.492 1.00 36.17 C
ATOM 10 O3' U B 11 -9.398 -24.001 21.849 1.00 40.90 O
ATOM 11 C2' U B 11 -11.326 -22.849 22.706 1.00 41.41 C
ATOM 12 O2' U B 11 -10.654 -23.025 23.959 1.00 42.72 O
ATOM 13 C1' U B 11 -11.640 -21.344 22.570 1.00 35.92 C
ATOM 14 N1 U B 11 -12.957 -21.084 22.099 1.00 36.18 N
ATOM 15 C2 U B 11 -13.780 -20.439 22.988 1.00 39.54 C
ATOM 16 O2 U B 11 -13.306 -20.155 24.063 1.00 40.29 O
ATOM 17 N3 U B 11 -15.087 -20.179 22.606 1.00 34.53 N
ATOM 18 C4 U B 11 -15.558 -20.505 21.355 1.00 36.79 C
ATOM 19 O4 U B 11 -16.702 -20.228 21.053 1.00 41.74 O
ATOM 20 C5 U B 11 -14.633 -21.167 20.466 1.00 38.00 C
ATOM 21 C6 U B 11 -13.384 -21.437 20.854 1.00 36.89 C
ATOM 22 P G B 12 -9.200 -25.535 21.310 1.00 45.49 P
ATOM 23 OP1 G B 12 -9.873 -25.537 20.000 1.00 38.28 O
ATOM 24 OP2 G B 12 -9.636 -26.394 22.413 1.00 48.43 O
ATOM 25 O5' G B 12 -7.626 -25.759 21.129 1.00 38.53 O
TER
Atoms:
OP1: (2.883,-22.061,17.654)
OP2: (4.648,-21.611,19.436)
C3': (0.031,-18.668,20.241)
C1': (-0.919,-18.732,18.013)
C5': (2.443,-19.396,19.452)
O6: (-4.312,-23.733,17.455)
O4': (0.484,-18.992,17.950)
C8: (-0.909,-21.185,17.669)
C2: (-5.185,-20.274,17.939)
C6: (-4.186,-22.491,17.611)
C5: (-2.960,-21.740,17.656)
C4: (-2.941,-20.372,17.845)
P: (3.224,-21.824,19.071)
C4': (1.149,-18.590,19.207)
C2': (-1.088,-18.059,19.396)
O2': (-0.915,-16.625,19.296)
N1: (-5.305,-21.657,17.753)
N2: (-6.336,-19.586,18.075)
N3: (-4.029,-19.574,17.991)
N7: (-1.665,-22.224,17.560)
N9: (-1.598,-20.002,17.840)
O5': (2.219,-20.700,19.635)
O3': (0.246,-17.830,21.393)
OP2: (4.648,-21.611,19.436)
C3': (0.031,-18.668,20.241)
C1': (-0.919,-18.732,18.013)
C5': (2.443,-19.396,19.452)
O6: (-4.312,-23.733,17.455)
O4': (0.484,-18.992,17.950)
C8: (-0.909,-21.185,17.669)
C2: (-5.185,-20.274,17.939)
C6: (-4.186,-22.491,17.611)
C5: (-2.960,-21.740,17.656)
C4: (-2.941,-20.372,17.845)
P: (3.224,-21.824,19.071)
C4': (1.149,-18.590,19.207)
C2': (-1.088,-18.059,19.396)
O2': (-0.915,-16.625,19.296)
N1: (-5.305,-21.657,17.753)
N2: (-6.336,-19.586,18.075)
N3: (-4.029,-19.574,17.991)
N7: (-1.665,-22.224,17.560)
N9: (-1.598,-20.002,17.840)
O5': (2.219,-20.700,19.635)
O3': (0.246,-17.830,21.393)
C4: (-15.558,-20.505,21.355)
N3: (-15.087,-20.179,22.606)
OP1: (-8.743,-21.789,16.999)
OP2: (-11.396,-21.647,16.922)
C2: (-13.780,-20.439,22.988)
C1': (-11.640,-21.344,22.570)
C3': (-10.455,-23.150,21.492)
O5': (-10.162,-21.690,19.032)
O4': (-10.736,-20.802,21.640)
C5': (-9.118,-21.607,19.929)
P: (-10.052,-21.305,17.493)
C4': (-9.733,-21.836,21.317)
C2': (-11.326,-22.849,22.706)
O2': (-10.654,-23.025,23.959)
N1: (-12.957,-21.084,22.099)
O4: (-16.702,-20.228,21.053)
O2: (-13.306,-20.155,24.063)
C6: (-13.384,-21.437,20.854)
C5: (-14.633,-21.167,20.466)
O3': (-9.398,-24.001,21.849)
N3: (-15.087,-20.179,22.606)
OP1: (-8.743,-21.789,16.999)
OP2: (-11.396,-21.647,16.922)
C2: (-13.780,-20.439,22.988)
C1': (-11.640,-21.344,22.570)
C3': (-10.455,-23.150,21.492)
O5': (-10.162,-21.690,19.032)
O4': (-10.736,-20.802,21.640)
C5': (-9.118,-21.607,19.929)
P: (-10.052,-21.305,17.493)
C4': (-9.733,-21.836,21.317)
C2': (-11.326,-22.849,22.706)
O2': (-10.654,-23.025,23.959)
N1: (-12.957,-21.084,22.099)
O4: (-16.702,-20.228,21.053)
O2: (-13.306,-20.155,24.063)
C6: (-13.384,-21.437,20.854)
C5: (-14.633,-21.167,20.466)
O3': (-9.398,-24.001,21.849)
Image (generated by PyMOL):