Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A253:A235
Extra
PDB:
ATOM 1 O3' G A 252 91.840 119.426 3.850 1.00 56.97 O
ATOM 2 P U A 253 90.574 119.289 4.828 1.00 55.81 P
ATOM 3 OP1 U A 253 90.971 119.912 6.122 1.00 56.02 O
ATOM 4 OP2 U A 253 90.143 117.869 4.814 1.00 54.99 O
ATOM 5 O5' U A 253 89.455 120.203 4.153 1.00 54.14 O
ATOM 6 C5' U A 253 89.319 121.594 4.513 1.00 54.43 C
ATOM 7 C4' U A 253 88.841 122.409 3.330 1.00 56.43 C
ATOM 8 O4' U A 253 89.924 122.610 2.374 1.00 58.77 O
ATOM 9 C3' U A 253 87.709 121.804 2.515 1.00 57.00 C
ATOM 10 O3' U A 253 86.427 121.983 3.125 1.00 55.23 O
ATOM 11 C2' U A 253 87.885 122.482 1.155 1.00 57.68 C
ATOM 12 O2' U A 253 87.361 123.797 1.088 1.00 55.91 O
ATOM 13 C1' U A 253 89.419 122.524 1.039 1.00 58.74 C
ATOM 14 N1 U A 253 90.048 121.351 0.382 1.00 59.60 N
ATOM 15 C2 U A 253 89.939 121.221 -1.008 1.00 58.60 C
ATOM 16 O2 U A 253 89.370 122.035 -1.714 1.00 58.80 O
ATOM 17 N3 U A 253 90.534 120.104 -1.538 1.00 58.54 N
ATOM 18 C4 U A 253 91.224 119.122 -0.864 1.00 59.33 C
ATOM 19 O4 U A 253 91.628 118.135 -1.484 1.00 60.93 O
ATOM 20 C5 U A 253 91.317 119.322 0.551 1.00 58.59 C
ATOM 21 C6 U A 253 90.737 120.396 1.116 1.00 58.73 C
ATOM 22 P G A 254 85.370 120.757 3.137 1.00 54.74 P
ATOM 23 OP1 G A 254 84.054 121.288 3.585 1.00 52.03 O
ATOM 24 OP2 G A 254 85.960 119.569 3.812 1.00 52.18 O
ATOM 25 O5' G A 254 85.240 120.356 1.602 1.00 55.21 O
TER
ATOM 1 O3' G B 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 2 P A B 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 3 OP1 A B 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 4 OP2 A B 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 5 O5' A B 235 94.071 120.166 -8.232 1.00 68.36 O
ATOM 6 C5' A B 235 92.672 120.293 -8.518 1.00 65.00 C
ATOM 7 C4' A B 235 92.113 121.447 -7.736 1.00 63.47 C
ATOM 8 O4' A B 235 92.096 121.104 -6.319 1.00 62.86 O
ATOM 9 C3' A B 235 92.960 122.706 -7.843 1.00 63.32 C
ATOM 10 O3' A B 235 92.104 123.826 -7.733 1.00 64.79 O
ATOM 11 C2' A B 235 93.845 122.606 -6.606 1.00 62.65 C
ATOM 12 O2' A B 235 94.386 123.832 -6.171 1.00 61.49 O
ATOM 13 C1' A B 235 92.853 122.050 -5.593 1.00 62.65 C
ATOM 14 N9 A B 235 93.442 121.401 -4.415 1.00 62.98 N
ATOM 15 C8 A B 235 94.179 120.233 -4.349 1.00 63.34 C
ATOM 16 N7 A B 235 94.555 119.912 -3.137 1.00 62.88 N
ATOM 17 C5 A B 235 94.038 120.931 -2.348 1.00 62.56 C
ATOM 18 C6 A B 235 94.093 121.173 -0.966 1.00 62.38 C
ATOM 19 N6 A B 235 94.717 120.375 -0.097 1.00 61.95 N
ATOM 20 N1 A B 235 93.478 122.284 -0.496 1.00 62.29 N
ATOM 21 C2 A B 235 92.854 123.087 -1.363 1.00 62.05 C
ATOM 22 N3 A B 235 92.731 122.968 -2.682 1.00 61.90 N
ATOM 23 C4 A B 235 93.353 121.857 -3.120 1.00 62.43 C
ATOM 24 P A B 236 91.541 124.519 -9.062 1.00 66.17 P
ATOM 25 OP1 A B 236 92.569 124.315 -10.132 1.00 66.21 O
ATOM 26 OP2 A B 236 91.120 125.888 -8.682 1.00 66.36 O
ATOM 27 O5' A B 236 90.250 123.670 -9.457 1.00 65.21 O
TER
ATOM 2 P U A 253 90.574 119.289 4.828 1.00 55.81 P
ATOM 3 OP1 U A 253 90.971 119.912 6.122 1.00 56.02 O
ATOM 4 OP2 U A 253 90.143 117.869 4.814 1.00 54.99 O
ATOM 5 O5' U A 253 89.455 120.203 4.153 1.00 54.14 O
ATOM 6 C5' U A 253 89.319 121.594 4.513 1.00 54.43 C
ATOM 7 C4' U A 253 88.841 122.409 3.330 1.00 56.43 C
ATOM 8 O4' U A 253 89.924 122.610 2.374 1.00 58.77 O
ATOM 9 C3' U A 253 87.709 121.804 2.515 1.00 57.00 C
ATOM 10 O3' U A 253 86.427 121.983 3.125 1.00 55.23 O
ATOM 11 C2' U A 253 87.885 122.482 1.155 1.00 57.68 C
ATOM 12 O2' U A 253 87.361 123.797 1.088 1.00 55.91 O
ATOM 13 C1' U A 253 89.419 122.524 1.039 1.00 58.74 C
ATOM 14 N1 U A 253 90.048 121.351 0.382 1.00 59.60 N
ATOM 15 C2 U A 253 89.939 121.221 -1.008 1.00 58.60 C
ATOM 16 O2 U A 253 89.370 122.035 -1.714 1.00 58.80 O
ATOM 17 N3 U A 253 90.534 120.104 -1.538 1.00 58.54 N
ATOM 18 C4 U A 253 91.224 119.122 -0.864 1.00 59.33 C
ATOM 19 O4 U A 253 91.628 118.135 -1.484 1.00 60.93 O
ATOM 20 C5 U A 253 91.317 119.322 0.551 1.00 58.59 C
ATOM 21 C6 U A 253 90.737 120.396 1.116 1.00 58.73 C
ATOM 22 P G A 254 85.370 120.757 3.137 1.00 54.74 P
ATOM 23 OP1 G A 254 84.054 121.288 3.585 1.00 52.03 O
ATOM 24 OP2 G A 254 85.960 119.569 3.812 1.00 52.18 O
ATOM 25 O5' G A 254 85.240 120.356 1.602 1.00 55.21 O
TER
ATOM 1 O3' G B 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 2 P A B 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 3 OP1 A B 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 4 OP2 A B 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 5 O5' A B 235 94.071 120.166 -8.232 1.00 68.36 O
ATOM 6 C5' A B 235 92.672 120.293 -8.518 1.00 65.00 C
ATOM 7 C4' A B 235 92.113 121.447 -7.736 1.00 63.47 C
ATOM 8 O4' A B 235 92.096 121.104 -6.319 1.00 62.86 O
ATOM 9 C3' A B 235 92.960 122.706 -7.843 1.00 63.32 C
ATOM 10 O3' A B 235 92.104 123.826 -7.733 1.00 64.79 O
ATOM 11 C2' A B 235 93.845 122.606 -6.606 1.00 62.65 C
ATOM 12 O2' A B 235 94.386 123.832 -6.171 1.00 61.49 O
ATOM 13 C1' A B 235 92.853 122.050 -5.593 1.00 62.65 C
ATOM 14 N9 A B 235 93.442 121.401 -4.415 1.00 62.98 N
ATOM 15 C8 A B 235 94.179 120.233 -4.349 1.00 63.34 C
ATOM 16 N7 A B 235 94.555 119.912 -3.137 1.00 62.88 N
ATOM 17 C5 A B 235 94.038 120.931 -2.348 1.00 62.56 C
ATOM 18 C6 A B 235 94.093 121.173 -0.966 1.00 62.38 C
ATOM 19 N6 A B 235 94.717 120.375 -0.097 1.00 61.95 N
ATOM 20 N1 A B 235 93.478 122.284 -0.496 1.00 62.29 N
ATOM 21 C2 A B 235 92.854 123.087 -1.363 1.00 62.05 C
ATOM 22 N3 A B 235 92.731 122.968 -2.682 1.00 61.90 N
ATOM 23 C4 A B 235 93.353 121.857 -3.120 1.00 62.43 C
ATOM 24 P A B 236 91.541 124.519 -9.062 1.00 66.17 P
ATOM 25 OP1 A B 236 92.569 124.315 -10.132 1.00 66.21 O
ATOM 26 OP2 A B 236 91.120 125.888 -8.682 1.00 66.36 O
ATOM 27 O5' A B 236 90.250 123.670 -9.457 1.00 65.21 O
TER
Atoms:
C4: (91.224,119.122,-0.864)
N3: (90.534,120.104,-1.538)
OP1: (90.971,119.912,6.122)
OP2: (90.143,117.869,4.814)
C2: (89.939,121.221,-1.008)
C1': (89.419,122.524,1.039)
C3': (87.709,121.804,2.515)
O5': (89.455,120.203,4.153)
O4': (89.924,122.610,2.374)
C5': (89.319,121.594,4.513)
P: (90.574,119.289,4.828)
C4': (88.841,122.409,3.330)
C2': (87.885,122.482,1.155)
O2': (87.361,123.797,1.088)
N1: (90.048,121.351,0.382)
O4: (91.628,118.135,-1.484)
O2: (89.370,122.035,-1.714)
C6: (90.737,120.396,1.116)
C5: (91.317,119.322,0.551)
O3': (86.427,121.983,3.125)
N3: (90.534,120.104,-1.538)
OP1: (90.971,119.912,6.122)
OP2: (90.143,117.869,4.814)
C2: (89.939,121.221,-1.008)
C1': (89.419,122.524,1.039)
C3': (87.709,121.804,2.515)
O5': (89.455,120.203,4.153)
O4': (89.924,122.610,2.374)
C5': (89.319,121.594,4.513)
P: (90.574,119.289,4.828)
C4': (88.841,122.409,3.330)
C2': (87.885,122.482,1.155)
O2': (87.361,123.797,1.088)
N1: (90.048,121.351,0.382)
O4: (91.628,118.135,-1.484)
O2: (89.370,122.035,-1.714)
C6: (90.737,120.396,1.116)
C5: (91.317,119.322,0.551)
O3': (86.427,121.983,3.125)
OP1: (94.445,118.264,-9.796)
OP2: (96.288,119.055,-8.182)
C3': (92.960,122.706,-7.843)
C1': (92.853,122.050,-5.593)
C5': (92.672,120.293,-8.518)
O4': (92.096,121.104,-6.319)
C8: (94.179,120.233,-4.349)
O2': (94.386,123.832,-6.171)
C6: (94.093,121.173,-0.966)
C5: (94.038,120.931,-2.348)
C4: (93.353,121.857,-3.120)
P: (94.849,118.799,-8.464)
C4': (92.113,121.447,-7.736)
C2': (93.845,122.606,-6.606)
C2: (92.854,123.087,-1.363)
N1: (93.478,122.284,-0.496)
N3: (92.731,122.968,-2.682)
N6: (94.717,120.375,-0.097)
N7: (94.555,119.912,-3.137)
N9: (93.442,121.401,-4.415)
O5': (94.071,120.166,-8.232)
O3': (92.104,123.826,-7.733)
OP2: (96.288,119.055,-8.182)
C3': (92.960,122.706,-7.843)
C1': (92.853,122.050,-5.593)
C5': (92.672,120.293,-8.518)
O4': (92.096,121.104,-6.319)
C8: (94.179,120.233,-4.349)
O2': (94.386,123.832,-6.171)
C6: (94.093,121.173,-0.966)
C5: (94.038,120.931,-2.348)
C4: (93.353,121.857,-3.120)
P: (94.849,118.799,-8.464)
C4': (92.113,121.447,-7.736)
C2': (93.845,122.606,-6.606)
C2: (92.854,123.087,-1.363)
N1: (93.478,122.284,-0.496)
N3: (92.731,122.968,-2.682)
N6: (94.717,120.375,-0.097)
N7: (94.555,119.912,-3.137)
N9: (93.442,121.401,-4.415)
O5': (94.071,120.166,-8.232)
O3': (92.104,123.826,-7.733)
Image (generated by PyMOL):