Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 91.452 119.074 3.239 1.00 39.37 O
ATOM 2 P U A 253 90.132 118.904 4.130 1.00 39.44 P
ATOM 3 OP1 U A 253 90.450 119.430 5.481 1.00 39.01 O
ATOM 4 OP2 U A 253 89.671 117.503 3.977 1.00 39.19 O
ATOM 5 O5' U A 253 89.071 119.864 3.430 1.00 39.07 O
ATOM 6 C5' U A 253 88.920 121.237 3.832 1.00 39.26 C
ATOM 7 C4' U A 253 88.499 122.074 2.648 1.00 40.58 C
ATOM 8 O4' U A 253 89.616 122.211 1.731 1.00 40.74 O
ATOM 9 C3' U A 253 87.398 121.453 1.808 1.00 40.82 C
ATOM 10 O3' U A 253 86.108 121.711 2.335 1.00 39.74 O
ATOM 11 C2' U A 253 87.619 122.093 0.446 1.00 39.39 C
ATOM 12 O2' U A 253 87.078 123.395 0.371 1.00 39.93 O
ATOM 13 C1' U A 253 89.147 122.150 0.391 1.00 38.70 C
ATOM 14 N1 U A 253 89.767 120.983 -0.260 1.00 37.12 N
ATOM 15 C2 U A 253 89.591 120.828 -1.628 1.00 37.57 C
ATOM 16 O2 U A 253 88.953 121.614 -2.311 1.00 39.75 O
ATOM 17 N3 U A 253 90.191 119.720 -2.165 1.00 36.41 N
ATOM 18 C4 U A 253 90.938 118.774 -1.496 1.00 38.30 C
ATOM 19 O4 U A 253 91.402 117.815 -2.117 1.00 37.78 O
ATOM 20 C5 U A 253 91.078 119.010 -0.090 1.00 37.07 C
ATOM 21 C6 U A 253 90.501 120.074 0.462 1.00 35.01 C
ATOM 22 P G A 254 85.018 120.537 2.355 1.00 41.23 P
ATOM 23 OP1 G A 254 83.727 121.151 2.789 1.00 39.69 O
ATOM 24 OP2 G A 254 85.590 119.392 3.109 1.00 37.36 O
ATOM 25 O5' G A 254 84.878 120.091 0.829 1.00 42.43 O
TER
ATOM 1 O3' G B 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 2 P A B 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 3 OP1 A B 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 4 OP2 A B 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 5 O5' A B 235 93.691 119.896 -8.855 1.00 50.53 O
ATOM 6 C5' A B 235 92.280 120.000 -9.140 1.00 50.54 C
ATOM 7 C4' A B 235 91.684 121.160 -8.378 1.00 50.98 C
ATOM 8 O4' A B 235 91.578 120.823 -6.962 1.00 50.06 O
ATOM 9 C3' A B 235 92.518 122.435 -8.446 1.00 49.99 C
ATOM 10 O3' A B 235 91.664 123.564 -8.378 1.00 50.11 O
ATOM 11 C2' A B 235 93.348 122.337 -7.173 1.00 49.87 C
ATOM 12 O2' A B 235 93.858 123.570 -6.715 1.00 49.77 O
ATOM 13 C1' A B 235 92.318 121.759 -6.204 1.00 50.09 C
ATOM 14 N9 A B 235 92.908 121.081 -5.050 1.00 49.79 N
ATOM 15 C8 A B 235 93.645 119.921 -5.022 1.00 49.51 C
ATOM 16 N7 A B 235 94.070 119.596 -3.827 1.00 48.53 N
ATOM 17 C5 A B 235 93.571 120.602 -3.010 1.00 47.10 C
ATOM 18 C6 A B 235 93.675 120.838 -1.631 1.00 44.62 C
ATOM 19 N6 A B 235 94.343 120.043 -0.796 1.00 43.19 N
ATOM 20 N1 A B 235 93.062 121.931 -1.133 1.00 43.84 N
ATOM 21 C2 A B 235 92.391 122.727 -1.970 1.00 44.52 C
ATOM 22 N3 A B 235 92.220 122.613 -3.282 1.00 46.98 N
ATOM 23 C4 A B 235 92.845 121.517 -3.748 1.00 47.72 C
ATOM 24 P A B 236 91.155 124.252 -9.732 1.00 52.03 P
ATOM 25 OP1 A B 236 92.218 124.059 -10.751 1.00 51.48 O
ATOM 26 OP2 A B 236 90.681 125.627 -9.405 1.00 51.81 O
ATOM 27 O5' A B 236 89.885 123.388 -10.159 1.00 50.44 O
TER
ATOM 2 P U A 253 90.132 118.904 4.130 1.00 39.44 P
ATOM 3 OP1 U A 253 90.450 119.430 5.481 1.00 39.01 O
ATOM 4 OP2 U A 253 89.671 117.503 3.977 1.00 39.19 O
ATOM 5 O5' U A 253 89.071 119.864 3.430 1.00 39.07 O
ATOM 6 C5' U A 253 88.920 121.237 3.832 1.00 39.26 C
ATOM 7 C4' U A 253 88.499 122.074 2.648 1.00 40.58 C
ATOM 8 O4' U A 253 89.616 122.211 1.731 1.00 40.74 O
ATOM 9 C3' U A 253 87.398 121.453 1.808 1.00 40.82 C
ATOM 10 O3' U A 253 86.108 121.711 2.335 1.00 39.74 O
ATOM 11 C2' U A 253 87.619 122.093 0.446 1.00 39.39 C
ATOM 12 O2' U A 253 87.078 123.395 0.371 1.00 39.93 O
ATOM 13 C1' U A 253 89.147 122.150 0.391 1.00 38.70 C
ATOM 14 N1 U A 253 89.767 120.983 -0.260 1.00 37.12 N
ATOM 15 C2 U A 253 89.591 120.828 -1.628 1.00 37.57 C
ATOM 16 O2 U A 253 88.953 121.614 -2.311 1.00 39.75 O
ATOM 17 N3 U A 253 90.191 119.720 -2.165 1.00 36.41 N
ATOM 18 C4 U A 253 90.938 118.774 -1.496 1.00 38.30 C
ATOM 19 O4 U A 253 91.402 117.815 -2.117 1.00 37.78 O
ATOM 20 C5 U A 253 91.078 119.010 -0.090 1.00 37.07 C
ATOM 21 C6 U A 253 90.501 120.074 0.462 1.00 35.01 C
ATOM 22 P G A 254 85.018 120.537 2.355 1.00 41.23 P
ATOM 23 OP1 G A 254 83.727 121.151 2.789 1.00 39.69 O
ATOM 24 OP2 G A 254 85.590 119.392 3.109 1.00 37.36 O
ATOM 25 O5' G A 254 84.878 120.091 0.829 1.00 42.43 O
TER
ATOM 1 O3' G B 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 2 P A B 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 3 OP1 A B 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 4 OP2 A B 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 5 O5' A B 235 93.691 119.896 -8.855 1.00 50.53 O
ATOM 6 C5' A B 235 92.280 120.000 -9.140 1.00 50.54 C
ATOM 7 C4' A B 235 91.684 121.160 -8.378 1.00 50.98 C
ATOM 8 O4' A B 235 91.578 120.823 -6.962 1.00 50.06 O
ATOM 9 C3' A B 235 92.518 122.435 -8.446 1.00 49.99 C
ATOM 10 O3' A B 235 91.664 123.564 -8.378 1.00 50.11 O
ATOM 11 C2' A B 235 93.348 122.337 -7.173 1.00 49.87 C
ATOM 12 O2' A B 235 93.858 123.570 -6.715 1.00 49.77 O
ATOM 13 C1' A B 235 92.318 121.759 -6.204 1.00 50.09 C
ATOM 14 N9 A B 235 92.908 121.081 -5.050 1.00 49.79 N
ATOM 15 C8 A B 235 93.645 119.921 -5.022 1.00 49.51 C
ATOM 16 N7 A B 235 94.070 119.596 -3.827 1.00 48.53 N
ATOM 17 C5 A B 235 93.571 120.602 -3.010 1.00 47.10 C
ATOM 18 C6 A B 235 93.675 120.838 -1.631 1.00 44.62 C
ATOM 19 N6 A B 235 94.343 120.043 -0.796 1.00 43.19 N
ATOM 20 N1 A B 235 93.062 121.931 -1.133 1.00 43.84 N
ATOM 21 C2 A B 235 92.391 122.727 -1.970 1.00 44.52 C
ATOM 22 N3 A B 235 92.220 122.613 -3.282 1.00 46.98 N
ATOM 23 C4 A B 235 92.845 121.517 -3.748 1.00 47.72 C
ATOM 24 P A B 236 91.155 124.252 -9.732 1.00 52.03 P
ATOM 25 OP1 A B 236 92.218 124.059 -10.751 1.00 51.48 O
ATOM 26 OP2 A B 236 90.681 125.627 -9.405 1.00 51.81 O
ATOM 27 O5' A B 236 89.885 123.388 -10.159 1.00 50.44 O
TER
Atoms:
C4: (90.938,118.774,-1.496)
N3: (90.191,119.720,-2.165)
OP1: (90.450,119.430,5.481)
OP2: (89.671,117.503,3.977)
C2: (89.591,120.828,-1.628)
C1': (89.147,122.150,0.391)
C3': (87.398,121.453,1.808)
O5': (89.071,119.864,3.430)
O4': (89.616,122.211,1.731)
C5': (88.920,121.237,3.832)
P: (90.132,118.904,4.130)
C4': (88.499,122.074,2.648)
C2': (87.619,122.093,0.446)
O2': (87.078,123.395,0.371)
N1: (89.767,120.983,-0.260)
O4: (91.402,117.815,-2.117)
O2: (88.953,121.614,-2.311)
C6: (90.501,120.074,0.462)
C5: (91.078,119.010,-0.090)
O3': (86.108,121.711,2.335)
N3: (90.191,119.720,-2.165)
OP1: (90.450,119.430,5.481)
OP2: (89.671,117.503,3.977)
C2: (89.591,120.828,-1.628)
C1': (89.147,122.150,0.391)
C3': (87.398,121.453,1.808)
O5': (89.071,119.864,3.430)
O4': (89.616,122.211,1.731)
C5': (88.920,121.237,3.832)
P: (90.132,118.904,4.130)
C4': (88.499,122.074,2.648)
C2': (87.619,122.093,0.446)
O2': (87.078,123.395,0.371)
N1: (89.767,120.983,-0.260)
O4: (91.402,117.815,-2.117)
O2: (88.953,121.614,-2.311)
C6: (90.501,120.074,0.462)
C5: (91.078,119.010,-0.090)
O3': (86.108,121.711,2.335)
OP1: (94.033,118.008,-10.446)
OP2: (95.929,118.757,-8.878)
C3': (92.518,122.435,-8.446)
C1': (92.318,121.759,-6.204)
C5': (92.280,120.000,-9.140)
O4': (91.578,120.823,-6.962)
C8: (93.645,119.921,-5.022)
O2': (93.858,123.570,-6.715)
C6: (93.675,120.838,-1.631)
C5: (93.571,120.602,-3.010)
C4: (92.845,121.517,-3.748)
P: (94.479,118.543,-9.132)
C4': (91.684,121.160,-8.378)
C2': (93.348,122.337,-7.173)
C2: (92.391,122.727,-1.970)
N1: (93.062,121.931,-1.133)
N3: (92.220,122.613,-3.282)
N6: (94.343,120.043,-0.796)
N7: (94.070,119.596,-3.827)
N9: (92.908,121.081,-5.050)
O5': (93.691,119.896,-8.855)
O3': (91.664,123.564,-8.378)
OP2: (95.929,118.757,-8.878)
C3': (92.518,122.435,-8.446)
C1': (92.318,121.759,-6.204)
C5': (92.280,120.000,-9.140)
O4': (91.578,120.823,-6.962)
C8: (93.645,119.921,-5.022)
O2': (93.858,123.570,-6.715)
C6: (93.675,120.838,-1.631)
C5: (93.571,120.602,-3.010)
C4: (92.845,121.517,-3.748)
P: (94.479,118.543,-9.132)
C4': (91.684,121.160,-8.378)
C2': (93.348,122.337,-7.173)
C2: (92.391,122.727,-1.970)
N1: (93.062,121.931,-1.133)
N3: (92.220,122.613,-3.282)
N6: (94.343,120.043,-0.796)
N7: (94.070,119.596,-3.827)
N9: (92.908,121.081,-5.050)
O5': (93.691,119.896,-8.855)
O3': (91.664,123.564,-8.378)
Image (generated by PyMOL):