Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02079:02105
Extra
PDB:
ATOM 1 O3' C A2078 109.351 110.828 31.770 1.00 49.52 O
ATOM 2 P U A2079 110.826 110.970 31.159 1.00 53.71 P
ATOM 3 OP1 U A2079 111.432 112.185 31.764 1.00 53.44 O
ATOM 4 OP2 U A2079 110.705 110.859 29.677 1.00 52.09 O
ATOM 5 O5' U A2079 111.622 109.696 31.680 1.00 51.68 O
ATOM 6 C5' U A2079 112.817 109.266 31.012 1.00 52.26 C
ATOM 7 C4' U A2079 113.360 108.035 31.678 1.00 53.37 C
ATOM 8 O4' U A2079 113.889 108.388 32.981 1.00 53.63 O
ATOM 9 C3' U A2079 112.331 106.938 31.925 1.00 55.16 C
ATOM 10 O3' U A2079 112.996 105.673 31.897 1.00 59.90 O
ATOM 11 C2' U A2079 111.883 107.249 33.353 1.00 53.58 C
ATOM 12 O2' U A2079 111.331 106.152 34.047 1.00 50.95 O
ATOM 13 C1' U A2079 113.215 107.649 33.974 1.00 52.83 C
ATOM 14 N1 U A2079 113.177 108.447 35.208 1.00 52.37 N
ATOM 15 C2 U A2079 113.680 107.854 36.346 1.00 53.33 C
ATOM 16 O2 U A2079 114.049 106.688 36.380 1.00 54.69 O
ATOM 17 N3 U A2079 113.730 108.667 37.449 1.00 52.48 N
ATOM 18 C4 U A2079 113.317 109.972 37.535 1.00 52.08 C
ATOM 19 O4 U A2079 113.547 110.606 38.567 1.00 53.68 O
ATOM 20 C5 U A2079 112.748 110.497 36.330 1.00 51.75 C
ATOM 21 C6 U A2079 112.700 109.735 35.235 1.00 51.44 C
ATOM 22 P G A2080 113.529 105.069 30.503 1.00 60.67 P
ATOM 23 OP1 G A2080 112.564 105.484 29.446 1.00 59.26 O
ATOM 24 OP2 G A2080 113.800 103.624 30.723 1.00 60.59 O
ATOM 25 O5' G A2080 114.931 105.805 30.274 1.00 62.46 O
TER
ATOM 1 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 2 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 3 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 4 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 5 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
ATOM 6 C5' C B2105 116.586 107.310 42.558 1.00 59.14 C
ATOM 7 C4' C B2105 117.131 108.508 43.314 1.00 58.03 C
ATOM 8 O4' C B2105 117.880 109.379 42.424 1.00 57.43 O
ATOM 9 C3' C B2105 116.134 109.450 43.961 1.00 57.22 C
ATOM 10 O3' C B2105 115.642 108.923 45.186 1.00 56.26 O
ATOM 11 C2' C B2105 116.990 110.690 44.194 1.00 56.96 C
ATOM 12 O2' C B2105 117.844 110.578 45.313 1.00 57.53 O
ATOM 13 C1' C B2105 117.854 110.703 42.934 1.00 56.01 C
ATOM 14 N1 C B2105 117.345 111.619 41.898 1.00 56.27 N
ATOM 15 C2 C B2105 117.509 113.004 42.087 1.00 56.69 C
ATOM 16 O2 C B2105 118.064 113.411 43.120 1.00 56.74 O
ATOM 17 N3 C B2105 117.054 113.860 41.143 1.00 56.98 N
ATOM 18 C4 C B2105 116.453 113.387 40.049 1.00 57.34 C
ATOM 19 N4 C B2105 116.019 114.269 39.149 1.00 57.05 N
ATOM 20 C5 C B2105 116.268 111.987 39.832 1.00 56.77 C
ATOM 21 C6 C B2105 116.725 111.147 40.773 1.00 56.15 C
ATOM 22 P A B2106 114.164 109.309 45.682 1.00 55.56 P
ATOM 23 OP1 A B2106 114.030 108.821 47.080 1.00 56.11 O
ATOM 24 OP2 A B2106 113.197 108.856 44.650 1.00 54.88 O
ATOM 25 O5' A B2106 114.166 110.900 45.721 1.00 51.97 O
TER
ATOM 2 P U A2079 110.826 110.970 31.159 1.00 53.71 P
ATOM 3 OP1 U A2079 111.432 112.185 31.764 1.00 53.44 O
ATOM 4 OP2 U A2079 110.705 110.859 29.677 1.00 52.09 O
ATOM 5 O5' U A2079 111.622 109.696 31.680 1.00 51.68 O
ATOM 6 C5' U A2079 112.817 109.266 31.012 1.00 52.26 C
ATOM 7 C4' U A2079 113.360 108.035 31.678 1.00 53.37 C
ATOM 8 O4' U A2079 113.889 108.388 32.981 1.00 53.63 O
ATOM 9 C3' U A2079 112.331 106.938 31.925 1.00 55.16 C
ATOM 10 O3' U A2079 112.996 105.673 31.897 1.00 59.90 O
ATOM 11 C2' U A2079 111.883 107.249 33.353 1.00 53.58 C
ATOM 12 O2' U A2079 111.331 106.152 34.047 1.00 50.95 O
ATOM 13 C1' U A2079 113.215 107.649 33.974 1.00 52.83 C
ATOM 14 N1 U A2079 113.177 108.447 35.208 1.00 52.37 N
ATOM 15 C2 U A2079 113.680 107.854 36.346 1.00 53.33 C
ATOM 16 O2 U A2079 114.049 106.688 36.380 1.00 54.69 O
ATOM 17 N3 U A2079 113.730 108.667 37.449 1.00 52.48 N
ATOM 18 C4 U A2079 113.317 109.972 37.535 1.00 52.08 C
ATOM 19 O4 U A2079 113.547 110.606 38.567 1.00 53.68 O
ATOM 20 C5 U A2079 112.748 110.497 36.330 1.00 51.75 C
ATOM 21 C6 U A2079 112.700 109.735 35.235 1.00 51.44 C
ATOM 22 P G A2080 113.529 105.069 30.503 1.00 60.67 P
ATOM 23 OP1 G A2080 112.564 105.484 29.446 1.00 59.26 O
ATOM 24 OP2 G A2080 113.800 103.624 30.723 1.00 60.59 O
ATOM 25 O5' G A2080 114.931 105.805 30.274 1.00 62.46 O
TER
ATOM 1 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 2 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 3 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 4 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 5 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
ATOM 6 C5' C B2105 116.586 107.310 42.558 1.00 59.14 C
ATOM 7 C4' C B2105 117.131 108.508 43.314 1.00 58.03 C
ATOM 8 O4' C B2105 117.880 109.379 42.424 1.00 57.43 O
ATOM 9 C3' C B2105 116.134 109.450 43.961 1.00 57.22 C
ATOM 10 O3' C B2105 115.642 108.923 45.186 1.00 56.26 O
ATOM 11 C2' C B2105 116.990 110.690 44.194 1.00 56.96 C
ATOM 12 O2' C B2105 117.844 110.578 45.313 1.00 57.53 O
ATOM 13 C1' C B2105 117.854 110.703 42.934 1.00 56.01 C
ATOM 14 N1 C B2105 117.345 111.619 41.898 1.00 56.27 N
ATOM 15 C2 C B2105 117.509 113.004 42.087 1.00 56.69 C
ATOM 16 O2 C B2105 118.064 113.411 43.120 1.00 56.74 O
ATOM 17 N3 C B2105 117.054 113.860 41.143 1.00 56.98 N
ATOM 18 C4 C B2105 116.453 113.387 40.049 1.00 57.34 C
ATOM 19 N4 C B2105 116.019 114.269 39.149 1.00 57.05 N
ATOM 20 C5 C B2105 116.268 111.987 39.832 1.00 56.77 C
ATOM 21 C6 C B2105 116.725 111.147 40.773 1.00 56.15 C
ATOM 22 P A B2106 114.164 109.309 45.682 1.00 55.56 P
ATOM 23 OP1 A B2106 114.030 108.821 47.080 1.00 56.11 O
ATOM 24 OP2 A B2106 113.197 108.856 44.650 1.00 54.88 O
ATOM 25 O5' A B2106 114.166 110.900 45.721 1.00 51.97 O
TER
Atoms:
C4: (113.317,109.972,37.535)
N3: (113.730,108.667,37.449)
OP1: (111.432,112.185,31.764)
OP2: (110.705,110.859,29.677)
C2: (113.680,107.854,36.346)
C1': (113.215,107.649,33.974)
C3': (112.331,106.938,31.925)
O5': (111.622,109.696,31.680)
O4': (113.889,108.388,32.981)
C5': (112.817,109.266,31.012)
P: (110.826,110.970,31.159)
C4': (113.360,108.035,31.678)
C2': (111.883,107.249,33.353)
O2': (111.331,106.152,34.047)
N1: (113.177,108.447,35.208)
O4: (113.547,110.606,38.567)
O2: (114.049,106.688,36.380)
C6: (112.700,109.735,35.235)
C5: (112.748,110.497,36.330)
O3': (112.996,105.673,31.897)
N3: (113.730,108.667,37.449)
OP1: (111.432,112.185,31.764)
OP2: (110.705,110.859,29.677)
C2: (113.680,107.854,36.346)
C1': (113.215,107.649,33.974)
C3': (112.331,106.938,31.925)
O5': (111.622,109.696,31.680)
O4': (113.889,108.388,32.981)
C5': (112.817,109.266,31.012)
P: (110.826,110.970,31.159)
C4': (113.360,108.035,31.678)
C2': (111.883,107.249,33.353)
O2': (111.331,106.152,34.047)
N1: (113.177,108.447,35.208)
O4: (113.547,110.606,38.567)
O2: (114.049,106.688,36.380)
C6: (112.700,109.735,35.235)
C5: (112.748,110.497,36.330)
O3': (112.996,105.673,31.897)
C2: (117.509,113.004,42.087)
OP1: (116.800,105.828,40.158)
OP2: (114.493,106.750,39.539)
C4: (116.453,113.387,40.049)
O5': (115.766,107.723,41.447)
C3': (116.134,109.450,43.961)
C1': (117.854,110.703,42.934)
O4': (117.880,109.379,42.424)
C5': (116.586,107.310,42.558)
P: (115.871,106.983,40.035)
O2: (118.064,113.411,43.120)
C4': (117.131,108.508,43.314)
C2': (116.990,110.690,44.194)
O2': (117.844,110.578,45.313)
N1: (117.345,111.619,41.898)
N3: (117.054,113.860,41.143)
N4: (116.019,114.269,39.149)
C6: (116.725,111.147,40.773)
C5: (116.268,111.987,39.832)
O3': (115.642,108.923,45.186)
OP1: (116.800,105.828,40.158)
OP2: (114.493,106.750,39.539)
C4: (116.453,113.387,40.049)
O5': (115.766,107.723,41.447)
C3': (116.134,109.450,43.961)
C1': (117.854,110.703,42.934)
O4': (117.880,109.379,42.424)
C5': (116.586,107.310,42.558)
P: (115.871,106.983,40.035)
O2: (118.064,113.411,43.120)
C4': (117.131,108.508,43.314)
C2': (116.990,110.690,44.194)
O2': (117.844,110.578,45.313)
N1: (117.345,111.619,41.898)
N3: (117.054,113.860,41.143)
N4: (116.019,114.269,39.149)
C6: (116.725,111.147,40.773)
C5: (116.268,111.987,39.832)
O3': (115.642,108.923,45.186)
Image (generated by PyMOL):