Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MJA:B18:C8
Extra
PDB:
ATOM 1 O3' A A 17 0.555 -12.286 18.526 1.00 53.39 O
ATOM 2 P G A 18 1.310 -13.707 18.444 1.00 55.18 P
ATOM 3 OP1 G A 18 1.694 -14.152 19.809 1.00 54.82 O
ATOM 4 OP2 G A 18 2.355 -13.579 17.391 1.00 55.05 O
ATOM 5 O5' G A 18 0.198 -14.705 17.891 1.00 51.74 O
ATOM 6 C5' G A 18 -0.940 -15.027 18.667 1.00 48.43 C
ATOM 7 C4' G A 18 -1.904 -15.853 17.856 1.00 47.11 C
ATOM 8 O4' G A 18 -2.306 -15.095 16.684 1.00 46.20 O
ATOM 9 C3' G A 18 -1.374 -17.141 17.251 1.00 48.22 C
ATOM 10 O3' G A 18 -1.391 -18.213 18.175 1.00 50.65 O
ATOM 11 C2' G A 18 -2.413 -17.400 16.176 1.00 47.86 C
ATOM 12 O2' G A 18 -3.597 -17.923 16.752 1.00 48.90 O
ATOM 13 C1' G A 18 -2.629 -15.985 15.627 1.00 45.92 C
ATOM 14 N9 G A 18 -1.751 -15.697 14.494 1.00 43.96 N
ATOM 15 C8 G A 18 -0.587 -14.959 14.502 1.00 44.60 C
ATOM 16 N7 G A 18 0.008 -14.928 13.338 1.00 42.95 N
ATOM 17 C5 G A 18 -0.817 -15.678 12.511 1.00 41.16 C
ATOM 18 C6 G A 18 -0.681 -16.014 11.149 1.00 41.01 C
ATOM 19 O6 G A 18 0.232 -15.711 10.365 1.00 42.67 O
ATOM 20 N1 G A 18 -1.739 -16.798 10.709 1.00 40.64 N
ATOM 21 C2 G A 18 -2.788 -17.213 11.484 1.00 41.60 C
ATOM 22 N2 G A 18 -3.705 -17.989 10.882 1.00 41.72 N
ATOM 23 N3 G A 18 -2.928 -16.901 12.757 1.00 40.90 N
ATOM 24 C4 G A 18 -1.913 -16.144 13.203 1.00 41.64 C
ATOM 25 P U A 19 -0.305 -19.396 18.045 1.00 53.57 P
ATOM 26 OP1 U A 19 -0.537 -20.298 19.211 1.00 52.69 O
ATOM 27 OP2 U A 19 1.044 -18.795 17.827 1.00 49.72 O
ATOM 28 O5' U A 19 -0.698 -20.168 16.710 1.00 50.88 O
TER
ATOM 1 O3' U B 7 -3.682 -20.486 6.861 1.00 48.83 O
ATOM 2 P U B 8 -3.496 -18.864 6.894 1.00 47.61 P
ATOM 3 OP1 U B 8 -2.314 -18.401 6.147 1.00 49.83 O
ATOM 4 OP2 U B 8 -3.645 -18.446 8.304 1.00 49.17 O
ATOM 5 O5' U B 8 -4.784 -18.382 6.090 1.00 47.73 O
ATOM 6 C5' U B 8 -5.110 -18.977 4.831 1.00 50.95 C
ATOM 7 C4' U B 8 -6.568 -19.392 4.781 1.00 51.80 C
ATOM 8 O4' U B 8 -6.648 -20.643 4.071 1.00 53.92 O
ATOM 9 C3' U B 8 -7.188 -19.640 6.137 1.00 52.92 C
ATOM 10 O3' U B 8 -7.824 -18.438 6.590 1.00 52.90 O
ATOM 11 C2' U B 8 -8.089 -20.857 5.979 1.00 54.23 C
ATOM 12 O2' U B 8 -9.463 -20.599 5.902 1.00 55.62 O
ATOM 13 C1' U B 8 -7.557 -21.515 4.705 1.00 56.55 C
ATOM 14 N1 U B 8 -6.879 -22.794 4.944 1.00 59.30 N
ATOM 15 C2 U B 8 -7.310 -23.899 4.230 1.00 61.63 C
ATOM 16 O2 U B 8 -8.203 -23.848 3.389 1.00 62.34 O
ATOM 17 N3 U B 8 -6.657 -25.067 4.532 1.00 63.11 N
ATOM 18 C4 U B 8 -5.642 -25.234 5.450 1.00 63.41 C
ATOM 19 O4 U B 8 -5.185 -26.359 5.650 1.00 65.70 O
ATOM 20 C5 U B 8 -5.249 -24.043 6.126 1.00 62.06 C
ATOM 21 C6 U B 8 -5.864 -22.893 5.854 1.00 60.56 C
ATOM 22 P U B 9 -9.135 -17.832 5.840 1.00 50.78 P
ATOM 23 OP1 U B 9 -9.938 -18.819 5.109 1.00 49.65 O
ATOM 24 OP2 U B 9 -8.710 -16.596 5.138 1.00 51.87 O
ATOM 25 O5' U B 9 -10.004 -17.389 7.090 1.00 51.48 O
TER
ATOM 2 P G A 18 1.310 -13.707 18.444 1.00 55.18 P
ATOM 3 OP1 G A 18 1.694 -14.152 19.809 1.00 54.82 O
ATOM 4 OP2 G A 18 2.355 -13.579 17.391 1.00 55.05 O
ATOM 5 O5' G A 18 0.198 -14.705 17.891 1.00 51.74 O
ATOM 6 C5' G A 18 -0.940 -15.027 18.667 1.00 48.43 C
ATOM 7 C4' G A 18 -1.904 -15.853 17.856 1.00 47.11 C
ATOM 8 O4' G A 18 -2.306 -15.095 16.684 1.00 46.20 O
ATOM 9 C3' G A 18 -1.374 -17.141 17.251 1.00 48.22 C
ATOM 10 O3' G A 18 -1.391 -18.213 18.175 1.00 50.65 O
ATOM 11 C2' G A 18 -2.413 -17.400 16.176 1.00 47.86 C
ATOM 12 O2' G A 18 -3.597 -17.923 16.752 1.00 48.90 O
ATOM 13 C1' G A 18 -2.629 -15.985 15.627 1.00 45.92 C
ATOM 14 N9 G A 18 -1.751 -15.697 14.494 1.00 43.96 N
ATOM 15 C8 G A 18 -0.587 -14.959 14.502 1.00 44.60 C
ATOM 16 N7 G A 18 0.008 -14.928 13.338 1.00 42.95 N
ATOM 17 C5 G A 18 -0.817 -15.678 12.511 1.00 41.16 C
ATOM 18 C6 G A 18 -0.681 -16.014 11.149 1.00 41.01 C
ATOM 19 O6 G A 18 0.232 -15.711 10.365 1.00 42.67 O
ATOM 20 N1 G A 18 -1.739 -16.798 10.709 1.00 40.64 N
ATOM 21 C2 G A 18 -2.788 -17.213 11.484 1.00 41.60 C
ATOM 22 N2 G A 18 -3.705 -17.989 10.882 1.00 41.72 N
ATOM 23 N3 G A 18 -2.928 -16.901 12.757 1.00 40.90 N
ATOM 24 C4 G A 18 -1.913 -16.144 13.203 1.00 41.64 C
ATOM 25 P U A 19 -0.305 -19.396 18.045 1.00 53.57 P
ATOM 26 OP1 U A 19 -0.537 -20.298 19.211 1.00 52.69 O
ATOM 27 OP2 U A 19 1.044 -18.795 17.827 1.00 49.72 O
ATOM 28 O5' U A 19 -0.698 -20.168 16.710 1.00 50.88 O
TER
ATOM 1 O3' U B 7 -3.682 -20.486 6.861 1.00 48.83 O
ATOM 2 P U B 8 -3.496 -18.864 6.894 1.00 47.61 P
ATOM 3 OP1 U B 8 -2.314 -18.401 6.147 1.00 49.83 O
ATOM 4 OP2 U B 8 -3.645 -18.446 8.304 1.00 49.17 O
ATOM 5 O5' U B 8 -4.784 -18.382 6.090 1.00 47.73 O
ATOM 6 C5' U B 8 -5.110 -18.977 4.831 1.00 50.95 C
ATOM 7 C4' U B 8 -6.568 -19.392 4.781 1.00 51.80 C
ATOM 8 O4' U B 8 -6.648 -20.643 4.071 1.00 53.92 O
ATOM 9 C3' U B 8 -7.188 -19.640 6.137 1.00 52.92 C
ATOM 10 O3' U B 8 -7.824 -18.438 6.590 1.00 52.90 O
ATOM 11 C2' U B 8 -8.089 -20.857 5.979 1.00 54.23 C
ATOM 12 O2' U B 8 -9.463 -20.599 5.902 1.00 55.62 O
ATOM 13 C1' U B 8 -7.557 -21.515 4.705 1.00 56.55 C
ATOM 14 N1 U B 8 -6.879 -22.794 4.944 1.00 59.30 N
ATOM 15 C2 U B 8 -7.310 -23.899 4.230 1.00 61.63 C
ATOM 16 O2 U B 8 -8.203 -23.848 3.389 1.00 62.34 O
ATOM 17 N3 U B 8 -6.657 -25.067 4.532 1.00 63.11 N
ATOM 18 C4 U B 8 -5.642 -25.234 5.450 1.00 63.41 C
ATOM 19 O4 U B 8 -5.185 -26.359 5.650 1.00 65.70 O
ATOM 20 C5 U B 8 -5.249 -24.043 6.126 1.00 62.06 C
ATOM 21 C6 U B 8 -5.864 -22.893 5.854 1.00 60.56 C
ATOM 22 P U B 9 -9.135 -17.832 5.840 1.00 50.78 P
ATOM 23 OP1 U B 9 -9.938 -18.819 5.109 1.00 49.65 O
ATOM 24 OP2 U B 9 -8.710 -16.596 5.138 1.00 51.87 O
ATOM 25 O5' U B 9 -10.004 -17.389 7.090 1.00 51.48 O
TER
Atoms:
OP1: (1.694,-14.152,19.809)
OP2: (2.355,-13.579,17.391)
C3': (-1.374,-17.141,17.251)
C1': (-2.629,-15.985,15.627)
C5': (-0.940,-15.027,18.667)
O6: (0.232,-15.711,10.365)
O4': (-2.306,-15.095,16.684)
C8: (-0.587,-14.959,14.502)
C2: (-2.788,-17.213,11.484)
C6: (-0.681,-16.014,11.149)
C5: (-0.817,-15.678,12.511)
C4: (-1.913,-16.144,13.203)
P: (1.310,-13.707,18.444)
C4': (-1.904,-15.853,17.856)
C2': (-2.413,-17.400,16.176)
O2': (-3.597,-17.923,16.752)
N1: (-1.739,-16.798,10.709)
N2: (-3.705,-17.989,10.882)
N3: (-2.928,-16.901,12.757)
N7: (0.008,-14.928,13.338)
N9: (-1.751,-15.697,14.494)
O5': (0.198,-14.705,17.891)
O3': (-1.391,-18.213,18.175)
OP2: (2.355,-13.579,17.391)
C3': (-1.374,-17.141,17.251)
C1': (-2.629,-15.985,15.627)
C5': (-0.940,-15.027,18.667)
O6: (0.232,-15.711,10.365)
O4': (-2.306,-15.095,16.684)
C8: (-0.587,-14.959,14.502)
C2: (-2.788,-17.213,11.484)
C6: (-0.681,-16.014,11.149)
C5: (-0.817,-15.678,12.511)
C4: (-1.913,-16.144,13.203)
P: (1.310,-13.707,18.444)
C4': (-1.904,-15.853,17.856)
C2': (-2.413,-17.400,16.176)
O2': (-3.597,-17.923,16.752)
N1: (-1.739,-16.798,10.709)
N2: (-3.705,-17.989,10.882)
N3: (-2.928,-16.901,12.757)
N7: (0.008,-14.928,13.338)
N9: (-1.751,-15.697,14.494)
O5': (0.198,-14.705,17.891)
O3': (-1.391,-18.213,18.175)
C4: (-5.642,-25.234,5.450)
N3: (-6.657,-25.067,4.532)
OP1: (-2.314,-18.401,6.147)
OP2: (-3.645,-18.446,8.304)
C2: (-7.310,-23.899,4.230)
C1': (-7.557,-21.515,4.705)
C3': (-7.188,-19.640,6.137)
O5': (-4.784,-18.382,6.090)
O4': (-6.648,-20.643,4.071)
C5': (-5.110,-18.977,4.831)
P: (-3.496,-18.864,6.894)
C4': (-6.568,-19.392,4.781)
C2': (-8.089,-20.857,5.979)
O2': (-9.463,-20.599,5.902)
N1: (-6.879,-22.794,4.944)
O4: (-5.185,-26.359,5.650)
O2: (-8.203,-23.848,3.389)
C6: (-5.864,-22.893,5.854)
C5: (-5.249,-24.043,6.126)
O3': (-7.824,-18.438,6.590)
N3: (-6.657,-25.067,4.532)
OP1: (-2.314,-18.401,6.147)
OP2: (-3.645,-18.446,8.304)
C2: (-7.310,-23.899,4.230)
C1': (-7.557,-21.515,4.705)
C3': (-7.188,-19.640,6.137)
O5': (-4.784,-18.382,6.090)
O4': (-6.648,-20.643,4.071)
C5': (-5.110,-18.977,4.831)
P: (-3.496,-18.864,6.894)
C4': (-6.568,-19.392,4.781)
C2': (-8.089,-20.857,5.979)
O2': (-9.463,-20.599,5.902)
N1: (-6.879,-22.794,4.944)
O4: (-5.185,-26.359,5.650)
O2: (-8.203,-23.848,3.389)
C6: (-5.864,-22.893,5.854)
C5: (-5.249,-24.043,6.126)
O3': (-7.824,-18.438,6.590)
Image (generated by PyMOL):