ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CME:0253:0235

Extra

PDB:
ATOM 1 O3' G A 252 90.506 118.433 2.755 1.00 50.78 O
ATOM 2 P U A 253 89.156 118.169 3.574 1.00 51.32 P
ATOM 3 OP1 U A 253 89.401 118.648 4.957 1.00 51.42 O
ATOM 4 OP2 U A 253 88.769 116.760 3.352 1.00 51.25 O
ATOM 5 O5' U A 253 88.077 119.100 2.862 1.00 51.95 O
ATOM 6 C5' U A 253 87.843 120.451 3.311 1.00 51.94 C
ATOM 7 C4' U A 253 87.577 121.349 2.130 1.00 52.66 C
ATOM 8 O4' U A 253 88.780 121.440 1.332 1.00 50.79 O
ATOM 9 C3' U A 253 86.521 120.841 1.162 1.00 52.75 C
ATOM 10 O3' U A 253 85.217 121.204 1.571 1.00 55.75 O
ATOM 11 C2' U A 253 86.910 121.510 -0.141 1.00 50.77 C
ATOM 12 O2' U A 253 86.447 122.844 -0.193 1.00 48.59 O
ATOM 13 C1' U A 253 88.439 121.471 -0.044 1.00 50.88 C
ATOM 14 N1 U A 253 89.074 120.311 -0.693 1.00 51.16 N
ATOM 15 C2 U A 253 88.939 120.172 -2.067 1.00 51.31 C
ATOM 16 O2 U A 253 88.316 120.957 -2.765 1.00 50.49 O
ATOM 17 N3 U A 253 89.566 119.076 -2.594 1.00 52.19 N
ATOM 18 C4 U A 253 90.304 118.128 -1.912 1.00 52.93 C
ATOM 19 O4 U A 253 90.802 117.192 -2.536 1.00 55.06 O
ATOM 20 C5 U A 253 90.401 118.341 -0.503 1.00 50.80 C
ATOM 21 C6 U A 253 89.795 119.391 0.045 1.00 50.56 C
ATOM 22 P G A 254 84.106 120.066 1.718 1.00 58.70 P
ATOM 23 OP1 G A 254 82.851 120.720 2.174 1.00 58.81 O
ATOM 24 OP2 G A 254 84.708 118.976 2.526 1.00 58.89 O
ATOM 25 O5' G A 254 83.904 119.533 0.231 1.00 59.53 O
TER

ATOM 1 O3' G B 234 93.201 116.826 -8.400 1.00 62.28 O
ATOM 2 P A B 235 93.765 117.868 -9.474 1.00 60.60 P
ATOM 3 OP1 A B 235 93.381 117.335 -10.804 1.00 61.92 O
ATOM 4 OP2 A B 235 95.196 118.131 -9.176 1.00 59.58 O
ATOM 5 O5' A B 235 92.917 119.186 -9.203 1.00 58.99 O
ATOM 6 C5' A B 235 91.547 119.286 -9.630 1.00 58.39 C
ATOM 7 C4' A B 235 90.876 120.431 -8.919 1.00 59.06 C
ATOM 8 O4' A B 235 90.791 120.121 -7.500 1.00 59.47 O
ATOM 9 C3' A B 235 91.623 121.759 -9.002 1.00 58.41 C
ATOM 10 O3' A B 235 90.683 122.809 -8.839 1.00 59.13 O
ATOM 11 C2' A B 235 92.481 121.718 -7.746 1.00 59.10 C
ATOM 12 O2' A B 235 92.897 122.988 -7.295 1.00 59.34 O
ATOM 13 C1' A B 235 91.485 121.110 -6.766 1.00 60.02 C
ATOM 14 N9 A B 235 92.061 120.508 -5.568 1.00 59.71 N
ATOM 15 C8 A B 235 92.718 119.312 -5.419 1.00 59.56 C
ATOM 16 N7 A B 235 93.080 119.062 -4.185 1.00 60.15 N
ATOM 17 C5 A B 235 92.636 120.172 -3.477 1.00 59.73 C
ATOM 18 C6 A B 235 92.701 120.517 -2.119 1.00 58.87 C
ATOM 19 N6 A B 235 93.259 119.745 -1.182 1.00 58.92 N
ATOM 20 N1 A B 235 92.163 121.697 -1.748 1.00 58.09 N
ATOM 21 C2 A B 235 91.597 122.466 -2.680 1.00 58.17 C
ATOM 22 N3 A B 235 91.470 122.251 -3.980 1.00 58.87 N
ATOM 23 C4 A B 235 92.016 121.072 -4.318 1.00 59.42 C
ATOM 24 P A B 236 90.235 123.685 -10.097 1.00 60.22 P
ATOM 25 OP1 A B 236 91.307 123.575 -11.115 1.00 61.95 O
ATOM 26 OP2 A B 236 89.826 125.023 -9.597 1.00 60.01 O
ATOM 27 O5' A B 236 88.947 122.933 -10.652 1.00 59.52 O
TER

Atoms:
C4: (90.304,118.128,-1.912)
N3: (89.566,119.076,-2.594)
OP1: (89.401,118.648,4.957)
OP2: (88.769,116.760,3.352)
C2: (88.939,120.172,-2.067)
C1': (88.439,121.471,-0.044)
C3': (86.521,120.841,1.162)
O5': (88.077,119.100,2.862)
O4': (88.780,121.440,1.332)
C5': (87.843,120.451,3.311)
P: (89.156,118.169,3.574)
C4': (87.577,121.349,2.130)
C2': (86.910,121.510,-0.141)
O2': (86.447,122.844,-0.193)
N1: (89.074,120.311,-0.693)
O4: (90.802,117.192,-2.536)
O2: (88.316,120.957,-2.765)
C6: (89.795,119.391,0.045)
C5: (90.401,118.341,-0.503)
O3': (85.217,121.204,1.571)
OP1: (93.381,117.335,-10.804)
OP2: (95.196,118.131,-9.176)
C3': (91.623,121.759,-9.002)
C1': (91.485,121.110,-6.766)
C5': (91.547,119.286,-9.630)
O4': (90.791,120.121,-7.500)
C8: (92.718,119.312,-5.419)
O2': (92.897,122.988,-7.295)
C6: (92.701,120.517,-2.119)
C5: (92.636,120.172,-3.477)
C4: (92.016,121.072,-4.318)
P: (93.765,117.868,-9.474)
C4': (90.876,120.431,-8.919)
C2': (92.481,121.718,-7.746)
C2: (91.597,122.466,-2.680)
N1: (92.163,121.697,-1.748)
N3: (91.470,122.251,-3.980)
N6: (93.259,119.745,-1.182)
N7: (93.080,119.062,-4.185)
N9: (92.061,120.508,-5.568)
O5': (92.917,119.186,-9.203)
O3': (90.683,122.809,-8.839)
Image (generated by PyMOL):
PyMOL image
show in jmol