ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2YIE:X23:Z35

Extra

PDB:
ATOM 1 O3' U A 22 22.102 -82.498 -82.310 1.00 67.73 O
ATOM 2 P U A 23 23.326 -82.994 -81.393 1.00 74.97 P
ATOM 3 OP1 U A 23 23.673 -84.363 -81.844 1.00 83.87 O
ATOM 4 OP2 U A 23 24.368 -81.940 -81.440 1.00 80.14 O
ATOM 5 O5' U A 23 22.684 -83.055 -79.936 1.00 69.75 O
ATOM 6 C5' U A 23 22.076 -81.908 -79.356 1.00 67.50 C
ATOM 7 C4' U A 23 21.934 -82.039 -77.858 1.00 63.39 C
ATOM 8 O4' U A 23 20.774 -82.861 -77.548 1.00 64.44 O
ATOM 9 C3' U A 23 23.124 -82.675 -77.135 1.00 60.50 C
ATOM 10 O3' U A 23 23.400 -81.961 -75.936 1.00 59.12 O
ATOM 11 C2' U A 23 22.622 -84.070 -76.780 1.00 61.37 C
ATOM 12 O2' U A 23 23.211 -84.619 -75.622 1.00 61.12 O
ATOM 13 C1' U A 23 21.133 -83.827 -76.585 1.00 62.56 C
ATOM 14 N1 U A 23 20.304 -85.032 -76.785 1.00 72.06 N
ATOM 15 C2 U A 23 19.757 -85.597 -75.650 1.00 71.92 C
ATOM 16 O2 U A 23 19.913 -85.128 -74.538 1.00 69.28 O
ATOM 17 N3 U A 23 19.007 -86.722 -75.864 1.00 76.07 N
ATOM 18 C4 U A 23 18.764 -87.334 -77.078 1.00 80.77 C
ATOM 19 O4 U A 23 18.066 -88.352 -77.113 1.00 83.07 O
ATOM 20 C5 U A 23 19.378 -86.695 -78.205 1.00 82.31 C
ATOM 21 C6 U A 23 20.112 -85.593 -78.023 1.00 77.67 C
ATOM 22 P C A 24 24.806 -81.210 -75.771 1.00 76.15 P
ATOM 23 OP1 C A 24 25.024 -80.422 -77.015 1.00 79.55 O
ATOM 24 OP2 C A 24 24.773 -80.494 -74.467 1.00 73.28 O
ATOM 25 O5' C A 24 25.847 -82.417 -75.706 1.00 74.72 O
TER

ATOM 1 O3' G B 34 21.118 -82.930 -71.203 1.00 80.09 O
ATOM 2 P A B 35 20.006 -81.783 -71.363 1.00 65.60 P
ATOM 3 OP1 A B 35 18.694 -82.398 -71.075 1.00 66.27 O
ATOM 4 OP2 A B 35 20.445 -80.631 -70.545 1.00 64.73 O
ATOM 5 O5' A B 35 20.099 -81.421 -72.904 1.00 64.19 O
ATOM 6 C5' A B 35 21.160 -80.618 -73.400 1.00 63.27 C
ATOM 7 C4' A B 35 20.680 -79.706 -74.491 1.00 63.13 C
ATOM 8 O4' A B 35 20.237 -80.514 -75.613 1.00 62.97 O
ATOM 9 C3' A B 35 19.495 -78.828 -74.111 1.00 64.14 C
ATOM 10 O3' A B 35 19.565 -77.609 -74.841 1.00 64.30 O
ATOM 11 C2' A B 35 18.307 -79.648 -74.593 1.00 63.41 C
ATOM 12 O2' A B 35 17.140 -78.896 -74.844 1.00 63.99 O
ATOM 13 C1' A B 35 18.866 -80.273 -75.869 1.00 62.98 C
ATOM 14 N9 A B 35 18.241 -81.548 -76.232 1.00 62.80 N
ATOM 15 C8 A B 35 17.907 -82.584 -75.397 1.00 63.44 C
ATOM 16 N7 A B 35 17.352 -83.598 -76.013 1.00 64.51 N
ATOM 17 C5 A B 35 17.321 -83.205 -77.346 1.00 65.27 C
ATOM 18 C6 A B 35 16.854 -83.845 -78.513 1.00 66.73 C
ATOM 19 N6 A B 35 16.307 -85.065 -78.523 1.00 67.71 N
ATOM 20 N1 A B 35 16.972 -83.181 -79.687 1.00 66.64 N
ATOM 21 C2 A B 35 17.521 -81.956 -79.674 1.00 64.49 C
ATOM 22 N3 A B 35 17.996 -81.253 -78.647 1.00 63.65 N
ATOM 23 C4 A B 35 17.866 -81.942 -77.496 1.00 63.77 C
ATOM 24 P G B 36 20.694 -76.526 -74.480 1.00 68.11 P
ATOM 25 OP1 G B 36 21.860 -76.792 -75.368 1.00 68.04 O
ATOM 26 OP2 G B 36 20.887 -76.577 -73.004 1.00 71.45 O
ATOM 27 O5' G B 36 20.006 -75.152 -74.886 1.00 64.80 O
TER

Atoms:
C4: (18.764,-87.334,-77.078)
N3: (19.007,-86.722,-75.864)
OP1: (23.673,-84.363,-81.844)
OP2: (24.368,-81.940,-81.440)
C2: (19.757,-85.597,-75.650)
C1': (21.133,-83.827,-76.585)
C3': (23.124,-82.675,-77.135)
O5': (22.684,-83.055,-79.936)
O4': (20.774,-82.861,-77.548)
C5': (22.076,-81.908,-79.356)
P: (23.326,-82.994,-81.393)
C4': (21.934,-82.039,-77.858)
C2': (22.622,-84.070,-76.780)
O2': (23.211,-84.619,-75.622)
N1: (20.304,-85.032,-76.785)
O4: (18.066,-88.352,-77.113)
O2: (19.913,-85.128,-74.538)
C6: (20.112,-85.593,-78.023)
C5: (19.378,-86.695,-78.205)
O3': (23.400,-81.961,-75.936)
OP1: (18.694,-82.398,-71.075)
OP2: (20.445,-80.631,-70.545)
C3': (19.495,-78.828,-74.111)
C1': (18.866,-80.273,-75.869)
C5': (21.160,-80.618,-73.400)
O4': (20.237,-80.514,-75.613)
C8: (17.907,-82.584,-75.397)
O2': (17.140,-78.896,-74.844)
C6: (16.854,-83.845,-78.513)
C5: (17.321,-83.205,-77.346)
C4: (17.866,-81.942,-77.496)
P: (20.006,-81.783,-71.363)
C4': (20.680,-79.706,-74.491)
C2': (18.307,-79.648,-74.593)
C2: (17.521,-81.956,-79.674)
N1: (16.972,-83.181,-79.687)
N3: (17.996,-81.253,-78.647)
N6: (16.307,-85.065,-78.523)
N7: (17.352,-83.598,-76.013)
N9: (18.241,-81.548,-76.232)
O5': (20.099,-81.421,-72.904)
O3': (19.565,-77.609,-74.841)
Image (generated by PyMOL):
PyMOL image
show in jmol