ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ7:0347:0345

Extra

PDB:
ATOM 1 O3' G A 346 58.669 123.493 8.464 1.00 81.18 O
ATOM 2 P U A 347 59.516 122.379 7.659 1.00 81.38 P
ATOM 3 OP1 U A 347 60.850 122.189 8.291 1.00 81.78 O
ATOM 4 OP2 U A 347 59.432 122.711 6.214 1.00 82.39 O
ATOM 5 O5' U A 347 58.663 121.047 7.859 1.00 80.60 O
ATOM 6 C5' U A 347 58.764 120.268 9.068 1.00 78.94 C
ATOM 7 C4' U A 347 57.432 119.629 9.389 1.00 78.45 C
ATOM 8 O4' U A 347 56.473 120.658 9.735 1.00 77.08 O
ATOM 9 C3' U A 347 56.777 118.864 8.249 1.00 78.78 C
ATOM 10 O3' U A 347 57.291 117.535 8.189 1.00 82.38 O
ATOM 11 C2' U A 347 55.303 118.893 8.633 1.00 76.71 C
ATOM 12 O2' U A 347 54.964 117.915 9.591 1.00 76.34 O
ATOM 13 C1' U A 347 55.185 120.272 9.289 1.00 75.65 C
ATOM 14 N1 U A 347 54.629 121.347 8.450 1.00 73.90 N
ATOM 15 C2 U A 347 53.303 121.235 8.055 1.00 73.08 C
ATOM 16 O2 U A 347 52.605 120.269 8.326 1.00 71.79 O
ATOM 17 N3 U A 347 52.824 122.297 7.330 1.00 72.78 N
ATOM 18 C4 U A 347 53.512 123.433 6.960 1.00 72.55 C
ATOM 19 O4 U A 347 52.910 124.336 6.376 1.00 72.24 O
ATOM 20 C5 U A 347 54.884 123.466 7.376 1.00 71.79 C
ATOM 21 C6 U A 347 55.385 122.448 8.084 1.00 72.44 C
ATOM 22 P A A 348 57.397 116.774 6.774 1.00 85.21 P
ATOM 23 OP1 A A 348 58.062 115.464 7.053 1.00 83.65 O
ATOM 24 OP2 A A 348 57.993 117.696 5.770 1.00 84.11 O
ATOM 25 O5' A A 348 55.876 116.523 6.359 1.00 84.03 O
TER

ATOM 1 O3' C B 344 52.742 120.652 15.164 1.00 67.42 O
ATOM 2 P A B 345 53.749 120.231 13.979 1.00 67.59 P
ATOM 3 OP1 A B 345 52.927 119.800 12.814 1.00 67.48 O
ATOM 4 OP2 A B 345 54.781 119.309 14.532 1.00 66.03 O
ATOM 5 O5' A B 345 54.479 121.587 13.587 1.00 69.41 O
ATOM 6 C5' A B 345 55.689 121.570 12.815 1.00 71.57 C
ATOM 7 C4' A B 345 55.829 122.855 12.038 1.00 73.50 C
ATOM 8 O4' A B 345 54.834 122.888 10.976 1.00 73.78 O
ATOM 9 C3' A B 345 55.642 124.137 12.844 1.00 74.03 C
ATOM 10 O3' A B 345 56.525 125.128 12.340 1.00 75.55 O
ATOM 11 C2' A B 345 54.188 124.504 12.549 1.00 73.96 C
ATOM 12 O2' A B 345 53.913 125.883 12.702 1.00 71.58 O
ATOM 13 C1' A B 345 54.056 124.064 11.090 1.00 73.96 C
ATOM 14 N9 A B 345 52.684 123.757 10.675 1.00 74.57 N
ATOM 15 C8 A B 345 51.933 122.650 10.991 1.00 74.44 C
ATOM 16 N7 A B 345 50.721 122.672 10.490 1.00 75.39 N
ATOM 17 C5 A B 345 50.668 123.872 9.790 1.00 75.69 C
ATOM 18 C6 A B 345 49.641 124.497 9.040 1.00 75.51 C
ATOM 19 N6 A B 345 48.416 123.982 8.872 1.00 73.41 N
ATOM 20 N1 A B 345 49.921 125.691 8.468 1.00 75.01 N
ATOM 21 C2 A B 345 51.142 126.216 8.643 1.00 74.58 C
ATOM 22 N3 A B 345 52.181 125.733 9.326 1.00 75.20 N
ATOM 23 C4 A B 345 51.876 124.546 9.885 1.00 75.19 C
ATOM 24 P G B 346 57.858 125.501 13.159 1.00 75.70 P
ATOM 25 OP1 G B 346 58.208 124.367 14.048 1.00 76.39 O
ATOM 26 OP2 G B 346 57.649 126.854 13.735 1.00 76.79 O
ATOM 27 O5' G B 346 58.987 125.587 12.039 1.00 77.84 O
TER

Atoms:
C4: (53.512,123.433,6.960)
N3: (52.824,122.297,7.330)
OP1: (60.850,122.189,8.291)
OP2: (59.432,122.711,6.214)
C2: (53.303,121.235,8.055)
C1': (55.185,120.272,9.289)
C3': (56.777,118.864,8.249)
O5': (58.663,121.047,7.859)
O4': (56.473,120.658,9.735)
C5': (58.764,120.268,9.068)
P: (59.516,122.379,7.659)
C4': (57.432,119.629,9.389)
C2': (55.303,118.893,8.633)
O2': (54.964,117.915,9.591)
N1: (54.629,121.347,8.450)
O4: (52.910,124.336,6.376)
O2: (52.605,120.269,8.326)
C6: (55.385,122.448,8.084)
C5: (54.884,123.466,7.376)
O3': (57.291,117.535,8.189)
OP1: (52.927,119.800,12.814)
OP2: (54.781,119.309,14.532)
C3': (55.642,124.137,12.844)
C1': (54.056,124.064,11.090)
C5': (55.689,121.570,12.815)
O4': (54.834,122.888,10.976)
C8: (51.933,122.650,10.991)
O2': (53.913,125.883,12.702)
C6: (49.641,124.497,9.040)
C5: (50.668,123.872,9.790)
C4: (51.876,124.546,9.885)
P: (53.749,120.231,13.979)
C4': (55.829,122.855,12.038)
C2': (54.188,124.504,12.549)
C2: (51.142,126.216,8.643)
N1: (49.921,125.691,8.468)
N3: (52.181,125.733,9.326)
N6: (48.416,123.982,8.872)
N7: (50.721,122.672,10.490)
N9: (52.684,123.757,10.675)
O5': (54.479,121.587,13.587)
O3': (56.525,125.128,12.340)
Image (generated by PyMOL):
PyMOL image
show in jmol