Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1042:A1086
Extra
PDB:
ATOM 1 O3' G A1041 -70.959 108.064 63.538 1.00 59.09 O
ATOM 2 P U A1042 -72.240 107.558 62.690 1.00 88.80 P
ATOM 3 OP1 U A1042 -73.307 108.564 62.915 1.00109.98 O
ATOM 4 OP2 U A1042 -72.529 106.145 62.967 1.00108.57 O
ATOM 5 O5' U A1042 -71.788 107.739 61.172 1.00 58.53 O
ATOM 6 C5' U A1042 -71.854 106.643 60.253 1.00 59.48 C
ATOM 7 C4' U A1042 -71.110 106.971 58.987 1.00 60.30 C
ATOM 8 O4' U A1042 -70.863 105.738 58.279 1.00 60.33 O
ATOM 9 C3' U A1042 -71.847 107.864 58.006 1.00 61.25 C
ATOM 10 O3' U A1042 -71.750 109.249 58.399 1.00 61.16 O
ATOM 11 C2' U A1042 -71.322 107.413 56.637 1.00 61.45 C
ATOM 12 O2' U A1042 -70.121 108.005 56.183 1.00 62.55 O
ATOM 13 C1' U A1042 -71.033 105.932 56.890 1.00 61.13 C
ATOM 14 N1 U A1042 -72.044 104.968 56.435 1.00102.66 N
ATOM 15 C2 U A1042 -71.684 104.082 55.433 1.00103.08 C
ATOM 16 O2 U A1042 -70.591 104.094 54.890 1.00103.06 O
ATOM 17 N3 U A1042 -72.652 103.177 55.092 1.00102.06 N
ATOM 18 C4 U A1042 -73.913 103.070 55.631 1.00102.82 C
ATOM 19 O4 U A1042 -74.663 102.184 55.230 1.00103.49 O
ATOM 20 C5 U A1042 -74.215 104.029 56.647 1.00102.94 C
ATOM 21 C6 U A1042 -73.296 104.926 57.002 1.00102.30 C
ATOM 22 P C A1043 -70.440 110.130 58.056 1.00 89.66 P
ATOM 23 OP1 C A1043 -70.572 111.343 58.902 1.00116.67 O
ATOM 24 OP2 C A1043 -70.266 110.284 56.584 1.00118.81 O
ATOM 25 O5' C A1043 -69.225 109.289 58.652 1.00 34.45 O
TER
ATOM 1 O3' G B1085 -69.503 99.777 52.465 1.00 65.35 O
ATOM 2 P C B1086 -70.288 100.999 51.787 1.00 41.32 P
ATOM 3 OP1 C B1086 -70.935 101.761 52.889 1.00 86.12 O
ATOM 4 OP2 C B1086 -71.120 100.493 50.671 1.00 86.83 O
ATOM 5 O5' C B1086 -69.109 101.871 51.168 1.00 36.32 O
ATOM 6 C5' C B1086 -68.442 102.849 51.972 1.00 35.51 C
ATOM 7 C4' C B1086 -67.994 104.011 51.123 1.00 35.63 C
ATOM 8 O4' C B1086 -66.762 103.669 50.443 1.00 34.91 O
ATOM 9 C3' C B1086 -68.955 104.461 50.027 1.00 36.91 C
ATOM 10 O3' C B1086 -69.988 105.337 50.517 1.00 39.71 O
ATOM 11 C2' C B1086 -68.015 105.132 49.025 1.00 36.11 C
ATOM 12 O2' C B1086 -67.750 106.484 49.341 1.00 34.26 O
ATOM 13 C1' C B1086 -66.733 104.300 49.176 1.00 35.41 C
ATOM 14 N1 C B1086 -66.549 103.260 48.145 1.00 85.58 N
ATOM 15 C2 C B1086 -66.008 103.625 46.903 1.00 86.05 C
ATOM 16 O2 C B1086 -65.742 104.814 46.688 1.00 85.98 O
ATOM 17 N3 C B1086 -65.795 102.675 45.969 1.00 86.50 N
ATOM 18 C4 C B1086 -66.108 101.404 46.228 1.00 87.60 C
ATOM 19 N4 C B1086 -65.860 100.495 45.278 1.00 88.68 N
ATOM 20 C5 C B1086 -66.685 101.006 47.472 1.00 87.32 C
ATOM 21 C6 C B1086 -66.885 101.956 48.392 1.00 86.39 C
ATOM 22 P A B1087 -71.466 105.297 49.857 1.00 54.38 P
ATOM 23 OP1 A B1087 -72.230 106.367 50.521 1.00 55.26 O
ATOM 24 OP2 A B1087 -72.035 103.913 49.819 1.00 55.73 O
ATOM 25 O5' A B1087 -71.204 105.741 48.354 1.00 55.60 O
TER
ATOM 2 P U A1042 -72.240 107.558 62.690 1.00 88.80 P
ATOM 3 OP1 U A1042 -73.307 108.564 62.915 1.00109.98 O
ATOM 4 OP2 U A1042 -72.529 106.145 62.967 1.00108.57 O
ATOM 5 O5' U A1042 -71.788 107.739 61.172 1.00 58.53 O
ATOM 6 C5' U A1042 -71.854 106.643 60.253 1.00 59.48 C
ATOM 7 C4' U A1042 -71.110 106.971 58.987 1.00 60.30 C
ATOM 8 O4' U A1042 -70.863 105.738 58.279 1.00 60.33 O
ATOM 9 C3' U A1042 -71.847 107.864 58.006 1.00 61.25 C
ATOM 10 O3' U A1042 -71.750 109.249 58.399 1.00 61.16 O
ATOM 11 C2' U A1042 -71.322 107.413 56.637 1.00 61.45 C
ATOM 12 O2' U A1042 -70.121 108.005 56.183 1.00 62.55 O
ATOM 13 C1' U A1042 -71.033 105.932 56.890 1.00 61.13 C
ATOM 14 N1 U A1042 -72.044 104.968 56.435 1.00102.66 N
ATOM 15 C2 U A1042 -71.684 104.082 55.433 1.00103.08 C
ATOM 16 O2 U A1042 -70.591 104.094 54.890 1.00103.06 O
ATOM 17 N3 U A1042 -72.652 103.177 55.092 1.00102.06 N
ATOM 18 C4 U A1042 -73.913 103.070 55.631 1.00102.82 C
ATOM 19 O4 U A1042 -74.663 102.184 55.230 1.00103.49 O
ATOM 20 C5 U A1042 -74.215 104.029 56.647 1.00102.94 C
ATOM 21 C6 U A1042 -73.296 104.926 57.002 1.00102.30 C
ATOM 22 P C A1043 -70.440 110.130 58.056 1.00 89.66 P
ATOM 23 OP1 C A1043 -70.572 111.343 58.902 1.00116.67 O
ATOM 24 OP2 C A1043 -70.266 110.284 56.584 1.00118.81 O
ATOM 25 O5' C A1043 -69.225 109.289 58.652 1.00 34.45 O
TER
ATOM 1 O3' G B1085 -69.503 99.777 52.465 1.00 65.35 O
ATOM 2 P C B1086 -70.288 100.999 51.787 1.00 41.32 P
ATOM 3 OP1 C B1086 -70.935 101.761 52.889 1.00 86.12 O
ATOM 4 OP2 C B1086 -71.120 100.493 50.671 1.00 86.83 O
ATOM 5 O5' C B1086 -69.109 101.871 51.168 1.00 36.32 O
ATOM 6 C5' C B1086 -68.442 102.849 51.972 1.00 35.51 C
ATOM 7 C4' C B1086 -67.994 104.011 51.123 1.00 35.63 C
ATOM 8 O4' C B1086 -66.762 103.669 50.443 1.00 34.91 O
ATOM 9 C3' C B1086 -68.955 104.461 50.027 1.00 36.91 C
ATOM 10 O3' C B1086 -69.988 105.337 50.517 1.00 39.71 O
ATOM 11 C2' C B1086 -68.015 105.132 49.025 1.00 36.11 C
ATOM 12 O2' C B1086 -67.750 106.484 49.341 1.00 34.26 O
ATOM 13 C1' C B1086 -66.733 104.300 49.176 1.00 35.41 C
ATOM 14 N1 C B1086 -66.549 103.260 48.145 1.00 85.58 N
ATOM 15 C2 C B1086 -66.008 103.625 46.903 1.00 86.05 C
ATOM 16 O2 C B1086 -65.742 104.814 46.688 1.00 85.98 O
ATOM 17 N3 C B1086 -65.795 102.675 45.969 1.00 86.50 N
ATOM 18 C4 C B1086 -66.108 101.404 46.228 1.00 87.60 C
ATOM 19 N4 C B1086 -65.860 100.495 45.278 1.00 88.68 N
ATOM 20 C5 C B1086 -66.685 101.006 47.472 1.00 87.32 C
ATOM 21 C6 C B1086 -66.885 101.956 48.392 1.00 86.39 C
ATOM 22 P A B1087 -71.466 105.297 49.857 1.00 54.38 P
ATOM 23 OP1 A B1087 -72.230 106.367 50.521 1.00 55.26 O
ATOM 24 OP2 A B1087 -72.035 103.913 49.819 1.00 55.73 O
ATOM 25 O5' A B1087 -71.204 105.741 48.354 1.00 55.60 O
TER
Atoms:
C4: (-73.913,103.070,55.631)
N3: (-72.652,103.177,55.092)
OP1: (-73.307,108.564,62.915)
OP2: (-72.529,106.145,62.967)
C2: (-71.684,104.082,55.433)
C1': (-71.033,105.932,56.890)
C3': (-71.847,107.864,58.006)
O5': (-71.788,107.739,61.172)
O4': (-70.863,105.738,58.279)
C5': (-71.854,106.643,60.253)
P: (-72.240,107.558,62.690)
C4': (-71.110,106.971,58.987)
C2': (-71.322,107.413,56.637)
O2': (-70.121,108.005,56.183)
N1: (-72.044,104.968,56.435)
O4: (-74.663,102.184,55.230)
O2: (-70.591,104.094,54.890)
C6: (-73.296,104.926,57.002)
C5: (-74.215,104.029,56.647)
O3': (-71.750,109.249,58.399)
N3: (-72.652,103.177,55.092)
OP1: (-73.307,108.564,62.915)
OP2: (-72.529,106.145,62.967)
C2: (-71.684,104.082,55.433)
C1': (-71.033,105.932,56.890)
C3': (-71.847,107.864,58.006)
O5': (-71.788,107.739,61.172)
O4': (-70.863,105.738,58.279)
C5': (-71.854,106.643,60.253)
P: (-72.240,107.558,62.690)
C4': (-71.110,106.971,58.987)
C2': (-71.322,107.413,56.637)
O2': (-70.121,108.005,56.183)
N1: (-72.044,104.968,56.435)
O4: (-74.663,102.184,55.230)
O2: (-70.591,104.094,54.890)
C6: (-73.296,104.926,57.002)
C5: (-74.215,104.029,56.647)
O3': (-71.750,109.249,58.399)
C2: (-66.008,103.625,46.903)
OP1: (-70.935,101.761,52.889)
OP2: (-71.120,100.493,50.671)
C4: (-66.108,101.404,46.228)
O5': (-69.109,101.871,51.168)
C3': (-68.955,104.461,50.027)
C1': (-66.733,104.300,49.176)
O4': (-66.762,103.669,50.443)
C5': (-68.442,102.849,51.972)
P: (-70.288,100.999,51.787)
O2: (-65.742,104.814,46.688)
C4': (-67.994,104.011,51.123)
C2': (-68.015,105.132,49.025)
O2': (-67.750,106.484,49.341)
N1: (-66.549,103.260,48.145)
N3: (-65.795,102.675,45.969)
N4: (-65.860,100.495,45.278)
C6: (-66.885,101.956,48.392)
C5: (-66.685,101.006,47.472)
O3': (-69.988,105.337,50.517)
OP1: (-70.935,101.761,52.889)
OP2: (-71.120,100.493,50.671)
C4: (-66.108,101.404,46.228)
O5': (-69.109,101.871,51.168)
C3': (-68.955,104.461,50.027)
C1': (-66.733,104.300,49.176)
O4': (-66.762,103.669,50.443)
C5': (-68.442,102.849,51.972)
P: (-70.288,100.999,51.787)
O2: (-65.742,104.814,46.688)
C4': (-67.994,104.011,51.123)
C2': (-68.015,105.132,49.025)
O2': (-67.750,106.484,49.341)
N1: (-66.549,103.260,48.145)
N3: (-65.795,102.675,45.969)
N4: (-65.860,100.495,45.278)
C6: (-66.885,101.956,48.392)
C5: (-66.685,101.006,47.472)
O3': (-69.988,105.337,50.517)
Image (generated by PyMOL):