Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A539:A18
Extra
PDB:
ATOM 1 O3' U A 538 -22.890 75.011 75.335 1.00 33.15 O
ATOM 2 P U A 539 -23.128 76.478 75.969 1.00 54.50 P
ATOM 3 OP1 U A 539 -24.588 76.669 76.146 1.00 33.06 O
ATOM 4 OP2 U A 539 -22.352 77.500 75.233 1.00 32.20 O
ATOM 5 O5' U A 539 -22.516 76.355 77.432 1.00 24.30 O
ATOM 6 C5' U A 539 -21.552 77.304 77.882 1.00 21.67 C
ATOM 7 C4' U A 539 -21.490 77.345 79.389 1.00 20.18 C
ATOM 8 O4' U A 539 -22.801 77.656 79.942 1.00 19.40 O
ATOM 9 C3' U A 539 -20.974 76.119 80.136 1.00 19.64 C
ATOM 10 O3' U A 539 -20.045 76.542 81.125 1.00 18.30 O
ATOM 11 C2' U A 539 -22.216 75.591 80.848 1.00 19.84 C
ATOM 12 O2' U A 539 -21.918 75.018 82.104 1.00 20.96 O
ATOM 13 C1' U A 539 -23.010 76.870 81.087 1.00 19.94 C
ATOM 14 N1 U A 539 -24.444 76.615 81.260 1.00 26.28 N
ATOM 15 C2 U A 539 -24.905 76.523 82.552 1.00 28.85 C
ATOM 16 O2 U A 539 -24.184 76.696 83.525 1.00 32.46 O
ATOM 17 N3 U A 539 -26.238 76.213 82.674 1.00 28.09 N
ATOM 18 C4 U A 539 -27.137 75.990 81.652 1.00 29.86 C
ATOM 19 O4 U A 539 -28.282 75.602 81.922 1.00 34.08 O
ATOM 20 C5 U A 539 -26.584 76.140 80.338 1.00 28.41 C
ATOM 21 C6 U A 539 -25.290 76.445 80.192 1.00 27.00 C
ATOM 22 P C A 540 -19.062 75.474 81.813 1.00 25.66 P
ATOM 23 OP1 C A 540 -19.610 74.109 81.595 1.00 23.81 O
ATOM 24 OP2 C A 540 -18.818 75.947 83.190 1.00 20.57 O
ATOM 25 O5' C A 540 -17.694 75.598 80.999 1.00 21.59 O
TER
ATOM 1 O3' G B 17 -28.199 78.642 85.958 1.00 8.05 O
ATOM 2 P C B 18 -28.212 77.032 86.050 1.00 22.63 P
ATOM 3 OP1 C B 18 -27.442 76.667 87.271 1.00 40.11 O
ATOM 4 OP2 C B 18 -27.792 76.491 84.732 1.00 37.88 O
ATOM 5 O5' C B 18 -29.752 76.679 86.277 1.00 8.36 O
ATOM 6 C5' C B 18 -30.470 77.251 87.385 1.00 8.36 C
ATOM 7 C4' C B 18 -31.973 77.122 87.202 1.00 8.36 C
ATOM 8 O4' C B 18 -32.441 77.950 86.102 1.00 8.86 O
ATOM 9 C3' C B 18 -32.522 75.745 86.892 1.00 8.36 C
ATOM 10 O3' C B 18 -32.617 74.931 88.041 1.00 8.36 O
ATOM 11 C2' C B 18 -33.870 76.061 86.255 1.00 8.55 C
ATOM 12 O2' C B 18 -34.886 76.361 87.195 1.00 8.62 O
ATOM 13 C1' C B 18 -33.538 77.322 85.460 1.00 9.90 C
ATOM 14 N1 C B 18 -33.117 76.976 84.102 1.00 19.36 N
ATOM 15 C2 C B 18 -34.077 76.600 83.176 1.00 20.42 C
ATOM 16 O2 C B 18 -35.265 76.561 83.526 1.00 22.81 O
ATOM 17 N3 C B 18 -33.693 76.284 81.924 1.00 20.95 N
ATOM 18 C4 C B 18 -32.400 76.341 81.588 1.00 20.79 C
ATOM 19 N4 C B 18 -32.058 76.044 80.325 1.00 21.94 N
ATOM 20 C5 C B 18 -31.399 76.710 82.524 1.00 20.18 C
ATOM 21 C6 C B 18 -31.797 77.018 83.753 1.00 19.94 C
ATOM 22 P U B 19 -32.053 73.436 87.966 1.00 32.73 P
ATOM 23 OP1 U B 19 -32.087 72.874 89.342 1.00 24.57 O
ATOM 24 OP2 U B 19 -30.761 73.459 87.207 1.00 24.57 O
ATOM 25 O5' U B 19 -33.140 72.693 87.068 1.00 20.92 O
TER
ATOM 2 P U A 539 -23.128 76.478 75.969 1.00 54.50 P
ATOM 3 OP1 U A 539 -24.588 76.669 76.146 1.00 33.06 O
ATOM 4 OP2 U A 539 -22.352 77.500 75.233 1.00 32.20 O
ATOM 5 O5' U A 539 -22.516 76.355 77.432 1.00 24.30 O
ATOM 6 C5' U A 539 -21.552 77.304 77.882 1.00 21.67 C
ATOM 7 C4' U A 539 -21.490 77.345 79.389 1.00 20.18 C
ATOM 8 O4' U A 539 -22.801 77.656 79.942 1.00 19.40 O
ATOM 9 C3' U A 539 -20.974 76.119 80.136 1.00 19.64 C
ATOM 10 O3' U A 539 -20.045 76.542 81.125 1.00 18.30 O
ATOM 11 C2' U A 539 -22.216 75.591 80.848 1.00 19.84 C
ATOM 12 O2' U A 539 -21.918 75.018 82.104 1.00 20.96 O
ATOM 13 C1' U A 539 -23.010 76.870 81.087 1.00 19.94 C
ATOM 14 N1 U A 539 -24.444 76.615 81.260 1.00 26.28 N
ATOM 15 C2 U A 539 -24.905 76.523 82.552 1.00 28.85 C
ATOM 16 O2 U A 539 -24.184 76.696 83.525 1.00 32.46 O
ATOM 17 N3 U A 539 -26.238 76.213 82.674 1.00 28.09 N
ATOM 18 C4 U A 539 -27.137 75.990 81.652 1.00 29.86 C
ATOM 19 O4 U A 539 -28.282 75.602 81.922 1.00 34.08 O
ATOM 20 C5 U A 539 -26.584 76.140 80.338 1.00 28.41 C
ATOM 21 C6 U A 539 -25.290 76.445 80.192 1.00 27.00 C
ATOM 22 P C A 540 -19.062 75.474 81.813 1.00 25.66 P
ATOM 23 OP1 C A 540 -19.610 74.109 81.595 1.00 23.81 O
ATOM 24 OP2 C A 540 -18.818 75.947 83.190 1.00 20.57 O
ATOM 25 O5' C A 540 -17.694 75.598 80.999 1.00 21.59 O
TER
ATOM 1 O3' G B 17 -28.199 78.642 85.958 1.00 8.05 O
ATOM 2 P C B 18 -28.212 77.032 86.050 1.00 22.63 P
ATOM 3 OP1 C B 18 -27.442 76.667 87.271 1.00 40.11 O
ATOM 4 OP2 C B 18 -27.792 76.491 84.732 1.00 37.88 O
ATOM 5 O5' C B 18 -29.752 76.679 86.277 1.00 8.36 O
ATOM 6 C5' C B 18 -30.470 77.251 87.385 1.00 8.36 C
ATOM 7 C4' C B 18 -31.973 77.122 87.202 1.00 8.36 C
ATOM 8 O4' C B 18 -32.441 77.950 86.102 1.00 8.86 O
ATOM 9 C3' C B 18 -32.522 75.745 86.892 1.00 8.36 C
ATOM 10 O3' C B 18 -32.617 74.931 88.041 1.00 8.36 O
ATOM 11 C2' C B 18 -33.870 76.061 86.255 1.00 8.55 C
ATOM 12 O2' C B 18 -34.886 76.361 87.195 1.00 8.62 O
ATOM 13 C1' C B 18 -33.538 77.322 85.460 1.00 9.90 C
ATOM 14 N1 C B 18 -33.117 76.976 84.102 1.00 19.36 N
ATOM 15 C2 C B 18 -34.077 76.600 83.176 1.00 20.42 C
ATOM 16 O2 C B 18 -35.265 76.561 83.526 1.00 22.81 O
ATOM 17 N3 C B 18 -33.693 76.284 81.924 1.00 20.95 N
ATOM 18 C4 C B 18 -32.400 76.341 81.588 1.00 20.79 C
ATOM 19 N4 C B 18 -32.058 76.044 80.325 1.00 21.94 N
ATOM 20 C5 C B 18 -31.399 76.710 82.524 1.00 20.18 C
ATOM 21 C6 C B 18 -31.797 77.018 83.753 1.00 19.94 C
ATOM 22 P U B 19 -32.053 73.436 87.966 1.00 32.73 P
ATOM 23 OP1 U B 19 -32.087 72.874 89.342 1.00 24.57 O
ATOM 24 OP2 U B 19 -30.761 73.459 87.207 1.00 24.57 O
ATOM 25 O5' U B 19 -33.140 72.693 87.068 1.00 20.92 O
TER
Atoms:
C4: (-27.137,75.990,81.652)
N3: (-26.238,76.213,82.674)
OP1: (-24.588,76.669,76.146)
OP2: (-22.352,77.500,75.233)
C2: (-24.905,76.523,82.552)
C1': (-23.010,76.870,81.087)
C3': (-20.974,76.119,80.136)
O5': (-22.516,76.355,77.432)
O4': (-22.801,77.656,79.942)
C5': (-21.552,77.304,77.882)
P: (-23.128,76.478,75.969)
C4': (-21.490,77.345,79.389)
C2': (-22.216,75.591,80.848)
O2': (-21.918,75.018,82.104)
N1: (-24.444,76.615,81.260)
O4: (-28.282,75.602,81.922)
O2: (-24.184,76.696,83.525)
C6: (-25.290,76.445,80.192)
C5: (-26.584,76.140,80.338)
O3': (-20.045,76.542,81.125)
N3: (-26.238,76.213,82.674)
OP1: (-24.588,76.669,76.146)
OP2: (-22.352,77.500,75.233)
C2: (-24.905,76.523,82.552)
C1': (-23.010,76.870,81.087)
C3': (-20.974,76.119,80.136)
O5': (-22.516,76.355,77.432)
O4': (-22.801,77.656,79.942)
C5': (-21.552,77.304,77.882)
P: (-23.128,76.478,75.969)
C4': (-21.490,77.345,79.389)
C2': (-22.216,75.591,80.848)
O2': (-21.918,75.018,82.104)
N1: (-24.444,76.615,81.260)
O4: (-28.282,75.602,81.922)
O2: (-24.184,76.696,83.525)
C6: (-25.290,76.445,80.192)
C5: (-26.584,76.140,80.338)
O3': (-20.045,76.542,81.125)
C2: (-34.077,76.600,83.176)
OP1: (-27.442,76.667,87.271)
OP2: (-27.792,76.491,84.732)
C4: (-32.400,76.341,81.588)
O5': (-29.752,76.679,86.277)
C3': (-32.522,75.745,86.892)
C1': (-33.538,77.322,85.460)
O4': (-32.441,77.950,86.102)
C5': (-30.470,77.251,87.385)
P: (-28.212,77.032,86.050)
O2: (-35.265,76.561,83.526)
C4': (-31.973,77.122,87.202)
C2': (-33.870,76.061,86.255)
O2': (-34.886,76.361,87.195)
N1: (-33.117,76.976,84.102)
N3: (-33.693,76.284,81.924)
N4: (-32.058,76.044,80.325)
C6: (-31.797,77.018,83.753)
C5: (-31.399,76.710,82.524)
O3': (-32.617,74.931,88.041)
OP1: (-27.442,76.667,87.271)
OP2: (-27.792,76.491,84.732)
C4: (-32.400,76.341,81.588)
O5': (-29.752,76.679,86.277)
C3': (-32.522,75.745,86.892)
C1': (-33.538,77.322,85.460)
O4': (-32.441,77.950,86.102)
C5': (-30.470,77.251,87.385)
P: (-28.212,77.032,86.050)
O2: (-35.265,76.561,83.526)
C4': (-31.973,77.122,87.202)
C2': (-33.870,76.061,86.255)
O2': (-34.886,76.361,87.195)
N1: (-33.117,76.976,84.102)
N3: (-33.693,76.284,81.924)
N4: (-32.058,76.044,80.325)
C6: (-31.797,77.018,83.753)
C5: (-31.399,76.710,82.524)
O3': (-32.617,74.931,88.041)
Image (generated by PyMOL):