Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:A1042:A1086
Extra
PDB:
ATOM 1 O3' G A1041 -123.944 49.451 -3.058 1.00 61.96 O
ATOM 2 P U A1042 -125.215 50.333 -3.530 1.00 58.77 P
ATOM 3 OP1 U A1042 -126.285 50.105 -2.524 1.00 79.95 O
ATOM 4 OP2 U A1042 -125.513 50.094 -4.953 1.00 78.54 O
ATOM 5 O5' U A1042 -124.740 51.838 -3.323 1.00 80.35 O
ATOM 6 C5' U A1042 -124.797 52.779 -4.401 1.00 81.30 C
ATOM 7 C4' U A1042 -124.035 54.026 -4.048 1.00 82.12 C
ATOM 8 O4' U A1042 -123.771 54.756 -5.266 1.00 82.15 O
ATOM 9 C3' U A1042 -124.754 54.999 -3.129 1.00 83.07 C
ATOM 10 O3' U A1042 -124.655 54.576 -1.752 1.00 82.98 O
ATOM 11 C2' U A1042 -124.211 56.369 -3.553 1.00 83.27 C
ATOM 12 O2' U A1042 -123.007 56.802 -2.948 1.00 84.37 O
ATOM 13 C1' U A1042 -123.924 56.142 -5.041 1.00 82.95 C
ATOM 14 N1 U A1042 -124.933 56.627 -5.992 1.00 75.85 N
ATOM 15 C2 U A1042 -124.563 57.645 -6.862 1.00 76.27 C
ATOM 16 O2 U A1042 -123.460 58.176 -6.842 1.00 76.25 O
ATOM 17 N3 U A1042 -125.531 58.016 -7.758 1.00 75.25 N
ATOM 18 C4 U A1042 -126.803 57.498 -7.867 1.00 76.01 C
ATOM 19 O4 U A1042 -127.558 57.944 -8.726 1.00 76.68 O
ATOM 20 C5 U A1042 -127.117 56.464 -6.925 1.00 76.13 C
ATOM 21 C6 U A1042 -126.198 56.076 -6.039 1.00 75.49 C
ATOM 22 P C A1043 -123.334 54.880 -0.864 1.00119.74 P
ATOM 23 OP1 C A1043 -123.470 54.015 0.336 1.00146.75 O
ATOM 24 OP2 C A1043 -123.134 56.344 -0.686 1.00148.89 O
ATOM 25 O5' C A1043 -122.132 54.271 -1.712 1.00 48.70 O
TER
ATOM 1 O3' G B1085 -122.395 60.689 -11.088 1.00 51.12 O
ATOM 2 P C B1086 -123.165 61.346 -9.848 1.00 42.46 P
ATOM 3 OP1 C B1086 -123.820 60.242 -9.104 1.00 87.26 O
ATOM 4 OP2 C B1086 -123.983 62.481 -10.335 1.00 87.97 O
ATOM 5 O5' C B1086 -121.977 61.930 -8.964 1.00 22.39 O
ATOM 6 C5' C B1086 -121.310 61.098 -8.013 1.00 21.58 C
ATOM 7 C4' C B1086 -120.842 61.919 -6.845 1.00 21.70 C
ATOM 8 O4' C B1086 -119.603 62.590 -7.181 1.00 20.98 O
ATOM 9 C3' C B1086 -121.787 63.020 -6.376 1.00 22.98 C
ATOM 10 O3' C B1086 -122.805 62.524 -5.495 1.00 25.78 O
ATOM 11 C2' C B1086 -120.837 63.994 -5.687 1.00 22.18 C
ATOM 12 O2' C B1086 -120.577 63.633 -4.347 1.00 20.33 O
ATOM 13 C1' C B1086 -119.556 63.839 -6.520 1.00 21.48 C
ATOM 14 N1 C B1086 -119.360 64.891 -7.531 1.00 72.22 N
ATOM 15 C2 C B1086 -118.799 66.112 -7.140 1.00 72.69 C
ATOM 16 O2 C B1086 -118.530 66.297 -5.950 1.00 72.62 O
ATOM 17 N3 C B1086 -118.574 67.062 -8.067 1.00 73.14 N
ATOM 18 C4 C B1086 -118.904 66.841 -9.338 1.00 74.24 C
ATOM 19 N4 C B1086 -118.654 67.807 -10.227 1.00 75.32 N
ATOM 20 C5 C B1086 -119.502 65.618 -9.761 1.00 73.96 C
ATOM 21 C6 C B1086 -119.707 64.679 -8.834 1.00 73.03 C
ATOM 22 P A B1087 -124.271 63.200 -5.496 1.00 79.32 P
ATOM 23 OP1 A B1087 -125.040 62.529 -4.416 1.00 80.20 O
ATOM 24 OP2 A B1087 -124.852 63.281 -6.874 1.00 80.67 O
ATOM 25 O5' A B1087 -123.974 64.685 -5.022 1.00 60.38 O
TER
ATOM 2 P U A1042 -125.215 50.333 -3.530 1.00 58.77 P
ATOM 3 OP1 U A1042 -126.285 50.105 -2.524 1.00 79.95 O
ATOM 4 OP2 U A1042 -125.513 50.094 -4.953 1.00 78.54 O
ATOM 5 O5' U A1042 -124.740 51.838 -3.323 1.00 80.35 O
ATOM 6 C5' U A1042 -124.797 52.779 -4.401 1.00 81.30 C
ATOM 7 C4' U A1042 -124.035 54.026 -4.048 1.00 82.12 C
ATOM 8 O4' U A1042 -123.771 54.756 -5.266 1.00 82.15 O
ATOM 9 C3' U A1042 -124.754 54.999 -3.129 1.00 83.07 C
ATOM 10 O3' U A1042 -124.655 54.576 -1.752 1.00 82.98 O
ATOM 11 C2' U A1042 -124.211 56.369 -3.553 1.00 83.27 C
ATOM 12 O2' U A1042 -123.007 56.802 -2.948 1.00 84.37 O
ATOM 13 C1' U A1042 -123.924 56.142 -5.041 1.00 82.95 C
ATOM 14 N1 U A1042 -124.933 56.627 -5.992 1.00 75.85 N
ATOM 15 C2 U A1042 -124.563 57.645 -6.862 1.00 76.27 C
ATOM 16 O2 U A1042 -123.460 58.176 -6.842 1.00 76.25 O
ATOM 17 N3 U A1042 -125.531 58.016 -7.758 1.00 75.25 N
ATOM 18 C4 U A1042 -126.803 57.498 -7.867 1.00 76.01 C
ATOM 19 O4 U A1042 -127.558 57.944 -8.726 1.00 76.68 O
ATOM 20 C5 U A1042 -127.117 56.464 -6.925 1.00 76.13 C
ATOM 21 C6 U A1042 -126.198 56.076 -6.039 1.00 75.49 C
ATOM 22 P C A1043 -123.334 54.880 -0.864 1.00119.74 P
ATOM 23 OP1 C A1043 -123.470 54.015 0.336 1.00146.75 O
ATOM 24 OP2 C A1043 -123.134 56.344 -0.686 1.00148.89 O
ATOM 25 O5' C A1043 -122.132 54.271 -1.712 1.00 48.70 O
TER
ATOM 1 O3' G B1085 -122.395 60.689 -11.088 1.00 51.12 O
ATOM 2 P C B1086 -123.165 61.346 -9.848 1.00 42.46 P
ATOM 3 OP1 C B1086 -123.820 60.242 -9.104 1.00 87.26 O
ATOM 4 OP2 C B1086 -123.983 62.481 -10.335 1.00 87.97 O
ATOM 5 O5' C B1086 -121.977 61.930 -8.964 1.00 22.39 O
ATOM 6 C5' C B1086 -121.310 61.098 -8.013 1.00 21.58 C
ATOM 7 C4' C B1086 -120.842 61.919 -6.845 1.00 21.70 C
ATOM 8 O4' C B1086 -119.603 62.590 -7.181 1.00 20.98 O
ATOM 9 C3' C B1086 -121.787 63.020 -6.376 1.00 22.98 C
ATOM 10 O3' C B1086 -122.805 62.524 -5.495 1.00 25.78 O
ATOM 11 C2' C B1086 -120.837 63.994 -5.687 1.00 22.18 C
ATOM 12 O2' C B1086 -120.577 63.633 -4.347 1.00 20.33 O
ATOM 13 C1' C B1086 -119.556 63.839 -6.520 1.00 21.48 C
ATOM 14 N1 C B1086 -119.360 64.891 -7.531 1.00 72.22 N
ATOM 15 C2 C B1086 -118.799 66.112 -7.140 1.00 72.69 C
ATOM 16 O2 C B1086 -118.530 66.297 -5.950 1.00 72.62 O
ATOM 17 N3 C B1086 -118.574 67.062 -8.067 1.00 73.14 N
ATOM 18 C4 C B1086 -118.904 66.841 -9.338 1.00 74.24 C
ATOM 19 N4 C B1086 -118.654 67.807 -10.227 1.00 75.32 N
ATOM 20 C5 C B1086 -119.502 65.618 -9.761 1.00 73.96 C
ATOM 21 C6 C B1086 -119.707 64.679 -8.834 1.00 73.03 C
ATOM 22 P A B1087 -124.271 63.200 -5.496 1.00 79.32 P
ATOM 23 OP1 A B1087 -125.040 62.529 -4.416 1.00 80.20 O
ATOM 24 OP2 A B1087 -124.852 63.281 -6.874 1.00 80.67 O
ATOM 25 O5' A B1087 -123.974 64.685 -5.022 1.00 60.38 O
TER
Atoms:
C4: (-126.803,57.498,-7.867)
N3: (-125.531,58.016,-7.758)
OP1: (-126.285,50.105,-2.524)
OP2: (-125.513,50.094,-4.953)
C2: (-124.563,57.645,-6.862)
C1': (-123.924,56.142,-5.041)
C3': (-124.754,54.999,-3.129)
O5': (-124.740,51.838,-3.323)
O4': (-123.771,54.756,-5.266)
C5': (-124.797,52.779,-4.401)
P: (-125.215,50.333,-3.530)
C4': (-124.035,54.026,-4.048)
C2': (-124.211,56.369,-3.553)
O2': (-123.007,56.802,-2.948)
N1: (-124.933,56.627,-5.992)
O4: (-127.558,57.944,-8.726)
O2: (-123.460,58.176,-6.842)
C6: (-126.198,56.076,-6.039)
C5: (-127.117,56.464,-6.925)
O3': (-124.655,54.576,-1.752)
N3: (-125.531,58.016,-7.758)
OP1: (-126.285,50.105,-2.524)
OP2: (-125.513,50.094,-4.953)
C2: (-124.563,57.645,-6.862)
C1': (-123.924,56.142,-5.041)
C3': (-124.754,54.999,-3.129)
O5': (-124.740,51.838,-3.323)
O4': (-123.771,54.756,-5.266)
C5': (-124.797,52.779,-4.401)
P: (-125.215,50.333,-3.530)
C4': (-124.035,54.026,-4.048)
C2': (-124.211,56.369,-3.553)
O2': (-123.007,56.802,-2.948)
N1: (-124.933,56.627,-5.992)
O4: (-127.558,57.944,-8.726)
O2: (-123.460,58.176,-6.842)
C6: (-126.198,56.076,-6.039)
C5: (-127.117,56.464,-6.925)
O3': (-124.655,54.576,-1.752)
C2: (-118.799,66.112,-7.140)
OP1: (-123.820,60.242,-9.104)
OP2: (-123.983,62.481,-10.335)
C4: (-118.904,66.841,-9.338)
O5': (-121.977,61.930,-8.964)
C3': (-121.787,63.020,-6.376)
C1': (-119.556,63.839,-6.520)
O4': (-119.603,62.590,-7.181)
C5': (-121.310,61.098,-8.013)
P: (-123.165,61.346,-9.848)
O2: (-118.530,66.297,-5.950)
C4': (-120.842,61.919,-6.845)
C2': (-120.837,63.994,-5.687)
O2': (-120.577,63.633,-4.347)
N1: (-119.360,64.891,-7.531)
N3: (-118.574,67.062,-8.067)
N4: (-118.654,67.807,-10.227)
C6: (-119.707,64.679,-8.834)
C5: (-119.502,65.618,-9.761)
O3': (-122.805,62.524,-5.495)
OP1: (-123.820,60.242,-9.104)
OP2: (-123.983,62.481,-10.335)
C4: (-118.904,66.841,-9.338)
O5': (-121.977,61.930,-8.964)
C3': (-121.787,63.020,-6.376)
C1': (-119.556,63.839,-6.520)
O4': (-119.603,62.590,-7.181)
C5': (-121.310,61.098,-8.013)
P: (-123.165,61.346,-9.848)
O2: (-118.530,66.297,-5.950)
C4': (-120.842,61.919,-6.845)
C2': (-120.837,63.994,-5.687)
O2': (-120.577,63.633,-4.347)
N1: (-119.360,64.891,-7.531)
N3: (-118.574,67.062,-8.067)
N4: (-118.654,67.807,-10.227)
C6: (-119.707,64.679,-8.834)
C5: (-119.502,65.618,-9.761)
O3': (-122.805,62.524,-5.495)
Image (generated by PyMOL):