Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1113:A1012
Extra
PDB:
ATOM 1 O3' U A1112 -123.830 -84.303 -22.527 1.00 3.83 O
ATOM 2 P G A1113 -122.316 -83.887 -22.648 1.00 0.01 P
ATOM 3 OP1 G A1113 -121.803 -83.818 -21.273 1.00 0.01 O
ATOM 4 OP2 G A1113 -122.253 -82.687 -23.534 1.00 0.01 O
ATOM 5 O5' G A1113 -121.694 -85.124 -23.379 1.00 0.01 O
ATOM 6 C5' G A1113 -121.830 -86.391 -22.804 1.00 0.01 C
ATOM 7 C4' G A1113 -121.099 -87.402 -23.593 1.00 0.01 C
ATOM 8 O4' G A1113 -121.753 -87.579 -24.868 1.00 0.01 O
ATOM 9 C3' G A1113 -119.685 -87.046 -23.988 1.00 0.01 C
ATOM 10 O3' G A1113 -118.766 -87.134 -22.915 1.00 0.01 O
ATOM 11 C2' G A1113 -119.455 -88.059 -25.083 1.00 0.01 C
ATOM 12 O2' G A1113 -119.349 -89.358 -24.521 1.00 0.01 O
ATOM 13 C1' G A1113 -120.792 -87.977 -25.816 1.00 0.01 C
ATOM 14 N9 G A1113 -120.763 -86.988 -26.892 1.00 0.01 N
ATOM 15 C8 G A1113 -121.324 -85.746 -26.924 1.00 0.01 C
ATOM 16 N7 G A1113 -121.078 -85.130 -28.047 1.00 0.01 N
ATOM 17 C5 G A1113 -120.318 -86.031 -28.770 1.00 0.01 C
ATOM 18 C6 G A1113 -119.753 -85.948 -30.054 1.00 0.01 C
ATOM 19 O6 G A1113 -119.804 -85.015 -30.865 1.00 0.01 O
ATOM 20 N1 G A1113 -119.070 -87.101 -30.397 1.00 0.01 N
ATOM 21 C2 G A1113 -118.942 -88.192 -29.609 1.00 0.01 C
ATOM 22 N2 G A1113 -118.235 -89.200 -30.119 1.00 0.01 N
ATOM 23 N3 G A1113 -119.460 -88.281 -28.409 1.00 0.01 N
ATOM 24 C4 G A1113 -120.124 -87.172 -28.068 1.00 0.01 C
ATOM 25 P C A1114 -117.581 -86.053 -22.750 1.00 0.01 P
ATOM 26 OP1 C A1114 -117.014 -86.252 -21.413 1.00 0.01 O
ATOM 27 OP2 C A1114 -118.121 -84.719 -23.102 1.00 0.01 O
ATOM 28 O5' C A1114 -116.547 -86.509 -23.850 1.00 0.01 O
TER
ATOM 1 O3' U B1011 -117.249 -91.531 -30.751 1.00 0.01 O
ATOM 2 P U B1012 -116.534 -91.227 -32.134 1.00 0.01 P
ATOM 3 OP1 U B1012 -117.224 -90.097 -32.739 1.00 0.01 O
ATOM 4 OP2 U B1012 -116.464 -92.480 -32.870 1.00 0.01 O
ATOM 5 O5' U B1012 -115.092 -90.781 -31.690 1.00 0.01 O
ATOM 6 C5' U B1012 -114.932 -89.699 -30.801 1.00 0.01 C
ATOM 7 C4' U B1012 -113.497 -89.521 -30.392 1.00 0.01 C
ATOM 8 O4' U B1012 -113.077 -90.607 -29.543 1.00 0.01 O
ATOM 9 C3' U B1012 -112.470 -89.510 -31.502 1.00 0.01 C
ATOM 10 O3' U B1012 -112.437 -88.262 -32.184 1.00 0.01 O
ATOM 11 C2' U B1012 -111.191 -89.826 -30.732 1.00 0.01 C
ATOM 12 O2' U B1012 -110.713 -88.678 -30.053 1.00 0.01 O
ATOM 13 C1' U B1012 -111.694 -90.794 -29.674 1.00 0.01 C
ATOM 14 N1 U B1012 -111.445 -92.181 -30.016 1.00 0.01 N
ATOM 15 C2 U B1012 -110.286 -92.754 -29.572 1.00 0.01 C
ATOM 16 O2 U B1012 -109.461 -92.128 -28.969 1.00 0.01 O
ATOM 17 N3 U B1012 -110.113 -94.062 -29.870 1.00 0.01 N
ATOM 18 C4 U B1012 -110.986 -94.825 -30.554 1.00 0.01 C
ATOM 19 O4 U B1012 -110.679 -95.968 -30.760 1.00 0.01 O
ATOM 20 C5 U B1012 -112.184 -94.192 -30.964 1.00 0.01 C
ATOM 21 C6 U B1012 -112.377 -92.905 -30.679 1.00 0.01 C
ATOM 22 P A B1013 -112.166 -88.185 -33.755 1.00 0.01 P
ATOM 23 OP1 A B1013 -112.342 -86.789 -34.149 1.00 0.01 O
ATOM 24 OP2 A B1013 -112.991 -89.204 -34.409 1.00 0.01 O
ATOM 25 O5' A B1013 -110.653 -88.586 -33.854 1.00 0.01 O
TER
ATOM 2 P G A1113 -122.316 -83.887 -22.648 1.00 0.01 P
ATOM 3 OP1 G A1113 -121.803 -83.818 -21.273 1.00 0.01 O
ATOM 4 OP2 G A1113 -122.253 -82.687 -23.534 1.00 0.01 O
ATOM 5 O5' G A1113 -121.694 -85.124 -23.379 1.00 0.01 O
ATOM 6 C5' G A1113 -121.830 -86.391 -22.804 1.00 0.01 C
ATOM 7 C4' G A1113 -121.099 -87.402 -23.593 1.00 0.01 C
ATOM 8 O4' G A1113 -121.753 -87.579 -24.868 1.00 0.01 O
ATOM 9 C3' G A1113 -119.685 -87.046 -23.988 1.00 0.01 C
ATOM 10 O3' G A1113 -118.766 -87.134 -22.915 1.00 0.01 O
ATOM 11 C2' G A1113 -119.455 -88.059 -25.083 1.00 0.01 C
ATOM 12 O2' G A1113 -119.349 -89.358 -24.521 1.00 0.01 O
ATOM 13 C1' G A1113 -120.792 -87.977 -25.816 1.00 0.01 C
ATOM 14 N9 G A1113 -120.763 -86.988 -26.892 1.00 0.01 N
ATOM 15 C8 G A1113 -121.324 -85.746 -26.924 1.00 0.01 C
ATOM 16 N7 G A1113 -121.078 -85.130 -28.047 1.00 0.01 N
ATOM 17 C5 G A1113 -120.318 -86.031 -28.770 1.00 0.01 C
ATOM 18 C6 G A1113 -119.753 -85.948 -30.054 1.00 0.01 C
ATOM 19 O6 G A1113 -119.804 -85.015 -30.865 1.00 0.01 O
ATOM 20 N1 G A1113 -119.070 -87.101 -30.397 1.00 0.01 N
ATOM 21 C2 G A1113 -118.942 -88.192 -29.609 1.00 0.01 C
ATOM 22 N2 G A1113 -118.235 -89.200 -30.119 1.00 0.01 N
ATOM 23 N3 G A1113 -119.460 -88.281 -28.409 1.00 0.01 N
ATOM 24 C4 G A1113 -120.124 -87.172 -28.068 1.00 0.01 C
ATOM 25 P C A1114 -117.581 -86.053 -22.750 1.00 0.01 P
ATOM 26 OP1 C A1114 -117.014 -86.252 -21.413 1.00 0.01 O
ATOM 27 OP2 C A1114 -118.121 -84.719 -23.102 1.00 0.01 O
ATOM 28 O5' C A1114 -116.547 -86.509 -23.850 1.00 0.01 O
TER
ATOM 1 O3' U B1011 -117.249 -91.531 -30.751 1.00 0.01 O
ATOM 2 P U B1012 -116.534 -91.227 -32.134 1.00 0.01 P
ATOM 3 OP1 U B1012 -117.224 -90.097 -32.739 1.00 0.01 O
ATOM 4 OP2 U B1012 -116.464 -92.480 -32.870 1.00 0.01 O
ATOM 5 O5' U B1012 -115.092 -90.781 -31.690 1.00 0.01 O
ATOM 6 C5' U B1012 -114.932 -89.699 -30.801 1.00 0.01 C
ATOM 7 C4' U B1012 -113.497 -89.521 -30.392 1.00 0.01 C
ATOM 8 O4' U B1012 -113.077 -90.607 -29.543 1.00 0.01 O
ATOM 9 C3' U B1012 -112.470 -89.510 -31.502 1.00 0.01 C
ATOM 10 O3' U B1012 -112.437 -88.262 -32.184 1.00 0.01 O
ATOM 11 C2' U B1012 -111.191 -89.826 -30.732 1.00 0.01 C
ATOM 12 O2' U B1012 -110.713 -88.678 -30.053 1.00 0.01 O
ATOM 13 C1' U B1012 -111.694 -90.794 -29.674 1.00 0.01 C
ATOM 14 N1 U B1012 -111.445 -92.181 -30.016 1.00 0.01 N
ATOM 15 C2 U B1012 -110.286 -92.754 -29.572 1.00 0.01 C
ATOM 16 O2 U B1012 -109.461 -92.128 -28.969 1.00 0.01 O
ATOM 17 N3 U B1012 -110.113 -94.062 -29.870 1.00 0.01 N
ATOM 18 C4 U B1012 -110.986 -94.825 -30.554 1.00 0.01 C
ATOM 19 O4 U B1012 -110.679 -95.968 -30.760 1.00 0.01 O
ATOM 20 C5 U B1012 -112.184 -94.192 -30.964 1.00 0.01 C
ATOM 21 C6 U B1012 -112.377 -92.905 -30.679 1.00 0.01 C
ATOM 22 P A B1013 -112.166 -88.185 -33.755 1.00 0.01 P
ATOM 23 OP1 A B1013 -112.342 -86.789 -34.149 1.00 0.01 O
ATOM 24 OP2 A B1013 -112.991 -89.204 -34.409 1.00 0.01 O
ATOM 25 O5' A B1013 -110.653 -88.586 -33.854 1.00 0.01 O
TER
Atoms:
OP1: (-121.803,-83.818,-21.273)
OP2: (-122.253,-82.687,-23.534)
C3': (-119.685,-87.046,-23.988)
C1': (-120.792,-87.977,-25.816)
C5': (-121.830,-86.391,-22.804)
O6: (-119.804,-85.015,-30.865)
O4': (-121.753,-87.579,-24.868)
C8: (-121.324,-85.746,-26.924)
C2: (-118.942,-88.192,-29.609)
C6: (-119.753,-85.948,-30.054)
C5: (-120.318,-86.031,-28.770)
C4: (-120.124,-87.172,-28.068)
P: (-122.316,-83.887,-22.648)
C4': (-121.099,-87.402,-23.593)
C2': (-119.455,-88.059,-25.083)
O2': (-119.349,-89.358,-24.521)
N1: (-119.070,-87.101,-30.397)
N2: (-118.235,-89.200,-30.119)
N3: (-119.460,-88.281,-28.409)
N7: (-121.078,-85.130,-28.047)
N9: (-120.763,-86.988,-26.892)
O5': (-121.694,-85.124,-23.379)
O3': (-118.766,-87.134,-22.915)
OP2: (-122.253,-82.687,-23.534)
C3': (-119.685,-87.046,-23.988)
C1': (-120.792,-87.977,-25.816)
C5': (-121.830,-86.391,-22.804)
O6: (-119.804,-85.015,-30.865)
O4': (-121.753,-87.579,-24.868)
C8: (-121.324,-85.746,-26.924)
C2: (-118.942,-88.192,-29.609)
C6: (-119.753,-85.948,-30.054)
C5: (-120.318,-86.031,-28.770)
C4: (-120.124,-87.172,-28.068)
P: (-122.316,-83.887,-22.648)
C4': (-121.099,-87.402,-23.593)
C2': (-119.455,-88.059,-25.083)
O2': (-119.349,-89.358,-24.521)
N1: (-119.070,-87.101,-30.397)
N2: (-118.235,-89.200,-30.119)
N3: (-119.460,-88.281,-28.409)
N7: (-121.078,-85.130,-28.047)
N9: (-120.763,-86.988,-26.892)
O5': (-121.694,-85.124,-23.379)
O3': (-118.766,-87.134,-22.915)
C4: (-110.986,-94.825,-30.554)
N3: (-110.113,-94.062,-29.870)
OP1: (-117.224,-90.097,-32.739)
OP2: (-116.464,-92.480,-32.870)
C2: (-110.286,-92.754,-29.572)
C1': (-111.694,-90.794,-29.674)
C3': (-112.470,-89.510,-31.502)
O5': (-115.092,-90.781,-31.690)
O4': (-113.077,-90.607,-29.543)
C5': (-114.932,-89.699,-30.801)
P: (-116.534,-91.227,-32.134)
C4': (-113.497,-89.521,-30.392)
C2': (-111.191,-89.826,-30.732)
O2': (-110.713,-88.678,-30.053)
N1: (-111.445,-92.181,-30.016)
O4: (-110.679,-95.968,-30.760)
O2: (-109.461,-92.128,-28.969)
C6: (-112.377,-92.905,-30.679)
C5: (-112.184,-94.192,-30.964)
O3': (-112.437,-88.262,-32.184)
N3: (-110.113,-94.062,-29.870)
OP1: (-117.224,-90.097,-32.739)
OP2: (-116.464,-92.480,-32.870)
C2: (-110.286,-92.754,-29.572)
C1': (-111.694,-90.794,-29.674)
C3': (-112.470,-89.510,-31.502)
O5': (-115.092,-90.781,-31.690)
O4': (-113.077,-90.607,-29.543)
C5': (-114.932,-89.699,-30.801)
P: (-116.534,-91.227,-32.134)
C4': (-113.497,-89.521,-30.392)
C2': (-111.191,-89.826,-30.732)
O2': (-110.713,-88.678,-30.053)
N1: (-111.445,-92.181,-30.016)
O4: (-110.679,-95.968,-30.760)
O2: (-109.461,-92.128,-28.969)
C6: (-112.377,-92.905,-30.679)
C5: (-112.184,-94.192,-30.964)
O3': (-112.437,-88.262,-32.184)
Image (generated by PyMOL):