Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1961:A1924
Extra
PDB:
ATOM 1 O3' C A1960 -77.796 -17.987 2.675 1.00 0.01 O
ATOM 2 P G A1961 -78.019 -17.365 4.129 1.00 0.01 P
ATOM 3 OP1 G A1961 -77.031 -17.993 5.017 1.00 0.01 O
ATOM 4 OP2 G A1961 -79.442 -17.518 4.454 1.00 0.01 O
ATOM 5 O5' G A1961 -77.682 -15.839 3.914 1.00 0.01 O
ATOM 6 C5' G A1961 -76.392 -15.432 3.540 1.00 0.01 C
ATOM 7 C4' G A1961 -76.327 -13.945 3.365 1.00 0.01 C
ATOM 8 O4' G A1961 -76.944 -13.572 2.108 1.00 0.01 O
ATOM 9 C3' G A1961 -77.101 -13.129 4.370 1.00 0.01 C
ATOM 10 O3' G A1961 -76.473 -13.004 5.620 1.00 0.01 O
ATOM 11 C2' G A1961 -77.258 -11.824 3.640 1.00 0.01 C
ATOM 12 O2' G A1961 -76.039 -11.143 3.607 1.00 0.01 O
ATOM 13 C1' G A1961 -77.567 -12.319 2.241 1.00 0.01 C
ATOM 14 N9 G A1961 -79.004 -12.495 2.077 1.00 0.12 N
ATOM 15 C8 G A1961 -79.720 -13.574 2.484 1.00 0.12 C
ATOM 16 N7 G A1961 -80.998 -13.431 2.290 1.00 0.12 N
ATOM 17 C5 G A1961 -81.120 -12.171 1.745 1.00 0.12 C
ATOM 18 C6 G A1961 -82.263 -11.472 1.326 1.00 0.12 C
ATOM 19 O6 G A1961 -83.441 -11.845 1.362 1.00 0.12 O
ATOM 20 N1 G A1961 -81.932 -10.223 0.823 1.00 0.12 N
ATOM 21 C2 G A1961 -80.677 -9.711 0.729 1.00 0.12 C
ATOM 22 N2 G A1961 -80.584 -8.485 0.224 1.00 0.12 N
ATOM 23 N3 G A1961 -79.605 -10.348 1.120 1.00 0.12 N
ATOM 24 C4 G A1961 -79.898 -11.566 1.620 1.00 0.12 C
ATOM 25 P A A1962 -77.378 -12.718 6.906 1.00 0.01 P
ATOM 26 OP1 A A1962 -76.663 -13.248 8.080 1.00 0.01 O
ATOM 27 OP2 A A1962 -78.721 -13.232 6.619 1.00 0.01 O
ATOM 28 O5' A A1962 -77.409 -11.136 6.972 1.00 0.01 O
TER
ATOM 1 O3' G B1923 -84.743 -6.247 2.138 1.00 14.03 O
ATOM 2 P U B1924 -84.547 -5.765 0.622 1.00 13.59 P
ATOM 3 OP1 U B1924 -85.785 -6.128 -0.112 1.00 13.59 O
ATOM 4 OP2 U B1924 -83.243 -6.337 0.133 1.00 13.59 O
ATOM 5 O5' U B1924 -84.462 -4.168 0.760 1.00 13.59 O
ATOM 6 C5' U B1924 -83.944 -3.550 1.913 1.00 13.59 C
ATOM 7 C4' U B1924 -82.778 -2.644 1.587 1.00 13.59 C
ATOM 8 O4' U B1924 -81.936 -2.542 2.755 1.00 13.59 O
ATOM 9 C3' U B1924 -81.848 -3.110 0.465 1.00 13.59 C
ATOM 10 O3' U B1924 -82.194 -2.576 -0.801 1.00 13.59 O
ATOM 11 C2' U B1924 -80.462 -2.678 0.930 1.00 13.59 C
ATOM 12 O2' U B1924 -80.201 -1.326 0.589 1.00 13.59 O
ATOM 13 C1' U B1924 -80.594 -2.763 2.427 1.00 13.59 C
ATOM 14 N1 U B1924 -80.203 -4.071 2.964 1.00 13.70 N
ATOM 15 C2 U B1924 -78.897 -4.278 3.276 1.00 13.70 C
ATOM 16 O2 U B1924 -78.072 -3.435 3.038 1.00 13.70 O
ATOM 17 N3 U B1924 -78.604 -5.487 3.840 1.00 13.70 N
ATOM 18 C4 U B1924 -79.497 -6.483 4.142 1.00 13.70 C
ATOM 19 O4 U B1924 -79.130 -7.524 4.669 1.00 13.70 O
ATOM 20 C5 U B1924 -80.842 -6.193 3.806 1.00 13.70 C
ATOM 21 C6 U B1924 -81.141 -5.017 3.254 1.00 13.70 C
ATOM 22 P A B1925 -81.407 -3.046 -2.141 1.00 10.68 P
ATOM 23 OP1 A B1925 -81.738 -2.069 -3.213 1.00 10.68 O
ATOM 24 OP2 A B1925 -81.731 -4.483 -2.362 1.00 10.68 O
ATOM 25 O5' A B1925 -79.881 -2.899 -1.739 1.00 10.68 O
TER
ATOM 2 P G A1961 -78.019 -17.365 4.129 1.00 0.01 P
ATOM 3 OP1 G A1961 -77.031 -17.993 5.017 1.00 0.01 O
ATOM 4 OP2 G A1961 -79.442 -17.518 4.454 1.00 0.01 O
ATOM 5 O5' G A1961 -77.682 -15.839 3.914 1.00 0.01 O
ATOM 6 C5' G A1961 -76.392 -15.432 3.540 1.00 0.01 C
ATOM 7 C4' G A1961 -76.327 -13.945 3.365 1.00 0.01 C
ATOM 8 O4' G A1961 -76.944 -13.572 2.108 1.00 0.01 O
ATOM 9 C3' G A1961 -77.101 -13.129 4.370 1.00 0.01 C
ATOM 10 O3' G A1961 -76.473 -13.004 5.620 1.00 0.01 O
ATOM 11 C2' G A1961 -77.258 -11.824 3.640 1.00 0.01 C
ATOM 12 O2' G A1961 -76.039 -11.143 3.607 1.00 0.01 O
ATOM 13 C1' G A1961 -77.567 -12.319 2.241 1.00 0.01 C
ATOM 14 N9 G A1961 -79.004 -12.495 2.077 1.00 0.12 N
ATOM 15 C8 G A1961 -79.720 -13.574 2.484 1.00 0.12 C
ATOM 16 N7 G A1961 -80.998 -13.431 2.290 1.00 0.12 N
ATOM 17 C5 G A1961 -81.120 -12.171 1.745 1.00 0.12 C
ATOM 18 C6 G A1961 -82.263 -11.472 1.326 1.00 0.12 C
ATOM 19 O6 G A1961 -83.441 -11.845 1.362 1.00 0.12 O
ATOM 20 N1 G A1961 -81.932 -10.223 0.823 1.00 0.12 N
ATOM 21 C2 G A1961 -80.677 -9.711 0.729 1.00 0.12 C
ATOM 22 N2 G A1961 -80.584 -8.485 0.224 1.00 0.12 N
ATOM 23 N3 G A1961 -79.605 -10.348 1.120 1.00 0.12 N
ATOM 24 C4 G A1961 -79.898 -11.566 1.620 1.00 0.12 C
ATOM 25 P A A1962 -77.378 -12.718 6.906 1.00 0.01 P
ATOM 26 OP1 A A1962 -76.663 -13.248 8.080 1.00 0.01 O
ATOM 27 OP2 A A1962 -78.721 -13.232 6.619 1.00 0.01 O
ATOM 28 O5' A A1962 -77.409 -11.136 6.972 1.00 0.01 O
TER
ATOM 1 O3' G B1923 -84.743 -6.247 2.138 1.00 14.03 O
ATOM 2 P U B1924 -84.547 -5.765 0.622 1.00 13.59 P
ATOM 3 OP1 U B1924 -85.785 -6.128 -0.112 1.00 13.59 O
ATOM 4 OP2 U B1924 -83.243 -6.337 0.133 1.00 13.59 O
ATOM 5 O5' U B1924 -84.462 -4.168 0.760 1.00 13.59 O
ATOM 6 C5' U B1924 -83.944 -3.550 1.913 1.00 13.59 C
ATOM 7 C4' U B1924 -82.778 -2.644 1.587 1.00 13.59 C
ATOM 8 O4' U B1924 -81.936 -2.542 2.755 1.00 13.59 O
ATOM 9 C3' U B1924 -81.848 -3.110 0.465 1.00 13.59 C
ATOM 10 O3' U B1924 -82.194 -2.576 -0.801 1.00 13.59 O
ATOM 11 C2' U B1924 -80.462 -2.678 0.930 1.00 13.59 C
ATOM 12 O2' U B1924 -80.201 -1.326 0.589 1.00 13.59 O
ATOM 13 C1' U B1924 -80.594 -2.763 2.427 1.00 13.59 C
ATOM 14 N1 U B1924 -80.203 -4.071 2.964 1.00 13.70 N
ATOM 15 C2 U B1924 -78.897 -4.278 3.276 1.00 13.70 C
ATOM 16 O2 U B1924 -78.072 -3.435 3.038 1.00 13.70 O
ATOM 17 N3 U B1924 -78.604 -5.487 3.840 1.00 13.70 N
ATOM 18 C4 U B1924 -79.497 -6.483 4.142 1.00 13.70 C
ATOM 19 O4 U B1924 -79.130 -7.524 4.669 1.00 13.70 O
ATOM 20 C5 U B1924 -80.842 -6.193 3.806 1.00 13.70 C
ATOM 21 C6 U B1924 -81.141 -5.017 3.254 1.00 13.70 C
ATOM 22 P A B1925 -81.407 -3.046 -2.141 1.00 10.68 P
ATOM 23 OP1 A B1925 -81.738 -2.069 -3.213 1.00 10.68 O
ATOM 24 OP2 A B1925 -81.731 -4.483 -2.362 1.00 10.68 O
ATOM 25 O5' A B1925 -79.881 -2.899 -1.739 1.00 10.68 O
TER
Atoms:
OP1: (-77.031,-17.993,5.017)
OP2: (-79.442,-17.518,4.454)
C3': (-77.101,-13.129,4.370)
C1': (-77.567,-12.319,2.241)
C5': (-76.392,-15.432,3.540)
O6: (-83.441,-11.845,1.362)
O4': (-76.944,-13.572,2.108)
C8: (-79.720,-13.574,2.484)
C2: (-80.677,-9.711,0.729)
C6: (-82.263,-11.472,1.326)
C5: (-81.120,-12.171,1.745)
C4: (-79.898,-11.566,1.620)
P: (-78.019,-17.365,4.129)
C4': (-76.327,-13.945,3.365)
C2': (-77.258,-11.824,3.640)
O2': (-76.039,-11.143,3.607)
N1: (-81.932,-10.223,0.823)
N2: (-80.584,-8.485,0.224)
N3: (-79.605,-10.348,1.120)
N7: (-80.998,-13.431,2.290)
N9: (-79.004,-12.495,2.077)
O5': (-77.682,-15.839,3.914)
O3': (-76.473,-13.004,5.620)
OP2: (-79.442,-17.518,4.454)
C3': (-77.101,-13.129,4.370)
C1': (-77.567,-12.319,2.241)
C5': (-76.392,-15.432,3.540)
O6: (-83.441,-11.845,1.362)
O4': (-76.944,-13.572,2.108)
C8: (-79.720,-13.574,2.484)
C2: (-80.677,-9.711,0.729)
C6: (-82.263,-11.472,1.326)
C5: (-81.120,-12.171,1.745)
C4: (-79.898,-11.566,1.620)
P: (-78.019,-17.365,4.129)
C4': (-76.327,-13.945,3.365)
C2': (-77.258,-11.824,3.640)
O2': (-76.039,-11.143,3.607)
N1: (-81.932,-10.223,0.823)
N2: (-80.584,-8.485,0.224)
N3: (-79.605,-10.348,1.120)
N7: (-80.998,-13.431,2.290)
N9: (-79.004,-12.495,2.077)
O5': (-77.682,-15.839,3.914)
O3': (-76.473,-13.004,5.620)
C4: (-79.497,-6.483,4.142)
N3: (-78.604,-5.487,3.840)
OP1: (-85.785,-6.128,-0.112)
OP2: (-83.243,-6.337,0.133)
C2: (-78.897,-4.278,3.276)
C1': (-80.594,-2.763,2.427)
C3': (-81.848,-3.110,0.465)
O5': (-84.462,-4.168,0.760)
O4': (-81.936,-2.542,2.755)
C5': (-83.944,-3.550,1.913)
P: (-84.547,-5.765,0.622)
C4': (-82.778,-2.644,1.587)
C2': (-80.462,-2.678,0.930)
O2': (-80.201,-1.326,0.589)
N1: (-80.203,-4.071,2.964)
O4: (-79.130,-7.524,4.669)
O2: (-78.072,-3.435,3.038)
C6: (-81.141,-5.017,3.254)
C5: (-80.842,-6.193,3.806)
O3': (-82.194,-2.576,-0.801)
N3: (-78.604,-5.487,3.840)
OP1: (-85.785,-6.128,-0.112)
OP2: (-83.243,-6.337,0.133)
C2: (-78.897,-4.278,3.276)
C1': (-80.594,-2.763,2.427)
C3': (-81.848,-3.110,0.465)
O5': (-84.462,-4.168,0.760)
O4': (-81.936,-2.542,2.755)
C5': (-83.944,-3.550,1.913)
P: (-84.547,-5.765,0.622)
C4': (-82.778,-2.644,1.587)
C2': (-80.462,-2.678,0.930)
O2': (-80.201,-1.326,0.589)
N1: (-80.203,-4.071,2.964)
O4: (-79.130,-7.524,4.669)
O2: (-78.072,-3.435,3.038)
C6: (-81.141,-5.017,3.254)
C5: (-80.842,-6.193,3.806)
O3': (-82.194,-2.576,-0.801)
Image (generated by PyMOL):