Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2495:A1248
Extra
PDB:
ATOM 1 O3' C A2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 2 P G A2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 3 OP1 G A2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 4 OP2 G A2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 5 O5' G A2495 -74.163 -64.814 12.306 1.00 0.01 O
ATOM 6 C5' G A2495 -73.378 -65.395 11.299 1.00 0.01 C
ATOM 7 C4' G A2495 -72.436 -66.436 11.848 1.00 0.01 C
ATOM 8 O4' G A2495 -72.834 -66.854 13.171 1.00 0.01 O
ATOM 9 C3' G A2495 -72.358 -67.724 11.057 1.00 0.01 C
ATOM 10 O3' G A2495 -71.446 -67.615 9.993 1.00 0.01 O
ATOM 11 C2' G A2495 -71.936 -68.769 12.095 1.00 0.01 C
ATOM 12 O2' G A2495 -70.549 -68.965 12.037 1.00 0.01 O
ATOM 13 C1' G A2495 -72.284 -68.113 13.435 1.00 0.01 C
ATOM 14 N9 G A2495 -73.220 -68.913 14.260 1.00 0.01 N
ATOM 15 C8 G A2495 -74.579 -68.989 14.262 1.00 0.01 C
ATOM 16 N7 G A2495 -75.085 -69.792 15.156 1.00 0.01 N
ATOM 17 C5 G A2495 -73.977 -70.268 15.817 1.00 0.00 C
ATOM 18 C6 G A2495 -73.864 -71.187 16.875 1.00 0.01 C
ATOM 19 O6 G A2495 -74.746 -71.781 17.476 1.00 0.01 O
ATOM 20 N1 G A2495 -72.574 -71.421 17.257 1.00 0.01 N
ATOM 21 C2 G A2495 -71.496 -70.848 16.673 1.00 0.01 C
ATOM 22 N2 G A2495 -70.296 -71.185 17.168 1.00 0.01 N
ATOM 23 N3 G A2495 -71.571 -69.990 15.684 1.00 0.01 N
ATOM 24 C4 G A2495 -72.839 -69.740 15.297 1.00 0.01 C
ATOM 25 P A A2496 -71.936 -67.639 8.488 1.00 0.01 P
ATOM 26 OP1 A A2496 -72.501 -68.940 8.235 1.00 0.01 O
ATOM 27 OP2 A A2496 -70.795 -67.194 7.670 1.00 0.01 O
ATOM 28 O5' A A2496 -73.069 -66.563 8.455 1.00 0.01 O
TER
ATOM 1 O3' A B1247 -70.119 -74.100 20.991 1.00 0.01 O
ATOM 2 P U B1248 -68.986 -73.058 20.752 1.00 0.01 P
ATOM 3 OP1 U B1248 -68.421 -72.759 22.043 1.00 0.01 O
ATOM 4 OP2 U B1248 -69.554 -71.959 19.961 1.00 0.01 O
ATOM 5 O5' U B1248 -67.958 -73.869 19.890 1.00 0.01 O
ATOM 6 C5' U B1248 -68.241 -74.200 18.558 1.00 0.01 C
ATOM 7 C4' U B1248 -67.249 -73.583 17.620 1.00 0.01 C
ATOM 8 O4' U B1248 -67.667 -72.272 17.251 1.00 0.01 O
ATOM 9 C3' U B1248 -65.867 -73.364 18.158 1.00 0.01 C
ATOM 10 O3' U B1248 -65.118 -74.539 18.146 1.00 0.01 O
ATOM 11 C2' U B1248 -65.315 -72.297 17.228 1.00 0.01 C
ATOM 12 O2' U B1248 -64.727 -72.872 16.102 1.00 0.01 O
ATOM 13 C1' U B1248 -66.563 -71.568 16.778 1.00 0.01 C
ATOM 14 N1 U B1248 -66.608 -70.209 17.272 1.00 0.01 N
ATOM 15 C2 U B1248 -66.151 -69.320 16.391 1.00 0.01 C
ATOM 16 O2 U B1248 -65.760 -69.713 15.324 1.00 0.01 O
ATOM 17 N3 U B1248 -66.164 -68.041 16.819 1.00 0.01 N
ATOM 18 C4 U B1248 -66.574 -67.621 18.022 1.00 0.01 C
ATOM 19 O4 U B1248 -66.541 -66.469 18.284 1.00 0.01 O
ATOM 20 C5 U B1248 -67.010 -68.578 18.900 1.00 0.01 C
ATOM 21 C6 U B1248 -67.011 -69.829 18.500 1.00 0.01 C
ATOM 22 P G B1249 -63.907 -74.729 19.131 1.00 0.01 P
ATOM 23 OP1 G B1249 -62.925 -73.699 18.818 1.00 0.01 O
ATOM 24 OP2 G B1249 -63.495 -76.130 19.060 1.00 0.01 O
ATOM 25 O5' G B1249 -64.575 -74.450 20.512 1.00 0.01 O
TER
ATOM 2 P G A2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 3 OP1 G A2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 4 OP2 G A2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 5 O5' G A2495 -74.163 -64.814 12.306 1.00 0.01 O
ATOM 6 C5' G A2495 -73.378 -65.395 11.299 1.00 0.01 C
ATOM 7 C4' G A2495 -72.436 -66.436 11.848 1.00 0.01 C
ATOM 8 O4' G A2495 -72.834 -66.854 13.171 1.00 0.01 O
ATOM 9 C3' G A2495 -72.358 -67.724 11.057 1.00 0.01 C
ATOM 10 O3' G A2495 -71.446 -67.615 9.993 1.00 0.01 O
ATOM 11 C2' G A2495 -71.936 -68.769 12.095 1.00 0.01 C
ATOM 12 O2' G A2495 -70.549 -68.965 12.037 1.00 0.01 O
ATOM 13 C1' G A2495 -72.284 -68.113 13.435 1.00 0.01 C
ATOM 14 N9 G A2495 -73.220 -68.913 14.260 1.00 0.01 N
ATOM 15 C8 G A2495 -74.579 -68.989 14.262 1.00 0.01 C
ATOM 16 N7 G A2495 -75.085 -69.792 15.156 1.00 0.01 N
ATOM 17 C5 G A2495 -73.977 -70.268 15.817 1.00 0.00 C
ATOM 18 C6 G A2495 -73.864 -71.187 16.875 1.00 0.01 C
ATOM 19 O6 G A2495 -74.746 -71.781 17.476 1.00 0.01 O
ATOM 20 N1 G A2495 -72.574 -71.421 17.257 1.00 0.01 N
ATOM 21 C2 G A2495 -71.496 -70.848 16.673 1.00 0.01 C
ATOM 22 N2 G A2495 -70.296 -71.185 17.168 1.00 0.01 N
ATOM 23 N3 G A2495 -71.571 -69.990 15.684 1.00 0.01 N
ATOM 24 C4 G A2495 -72.839 -69.740 15.297 1.00 0.01 C
ATOM 25 P A A2496 -71.936 -67.639 8.488 1.00 0.01 P
ATOM 26 OP1 A A2496 -72.501 -68.940 8.235 1.00 0.01 O
ATOM 27 OP2 A A2496 -70.795 -67.194 7.670 1.00 0.01 O
ATOM 28 O5' A A2496 -73.069 -66.563 8.455 1.00 0.01 O
TER
ATOM 1 O3' A B1247 -70.119 -74.100 20.991 1.00 0.01 O
ATOM 2 P U B1248 -68.986 -73.058 20.752 1.00 0.01 P
ATOM 3 OP1 U B1248 -68.421 -72.759 22.043 1.00 0.01 O
ATOM 4 OP2 U B1248 -69.554 -71.959 19.961 1.00 0.01 O
ATOM 5 O5' U B1248 -67.958 -73.869 19.890 1.00 0.01 O
ATOM 6 C5' U B1248 -68.241 -74.200 18.558 1.00 0.01 C
ATOM 7 C4' U B1248 -67.249 -73.583 17.620 1.00 0.01 C
ATOM 8 O4' U B1248 -67.667 -72.272 17.251 1.00 0.01 O
ATOM 9 C3' U B1248 -65.867 -73.364 18.158 1.00 0.01 C
ATOM 10 O3' U B1248 -65.118 -74.539 18.146 1.00 0.01 O
ATOM 11 C2' U B1248 -65.315 -72.297 17.228 1.00 0.01 C
ATOM 12 O2' U B1248 -64.727 -72.872 16.102 1.00 0.01 O
ATOM 13 C1' U B1248 -66.563 -71.568 16.778 1.00 0.01 C
ATOM 14 N1 U B1248 -66.608 -70.209 17.272 1.00 0.01 N
ATOM 15 C2 U B1248 -66.151 -69.320 16.391 1.00 0.01 C
ATOM 16 O2 U B1248 -65.760 -69.713 15.324 1.00 0.01 O
ATOM 17 N3 U B1248 -66.164 -68.041 16.819 1.00 0.01 N
ATOM 18 C4 U B1248 -66.574 -67.621 18.022 1.00 0.01 C
ATOM 19 O4 U B1248 -66.541 -66.469 18.284 1.00 0.01 O
ATOM 20 C5 U B1248 -67.010 -68.578 18.900 1.00 0.01 C
ATOM 21 C6 U B1248 -67.011 -69.829 18.500 1.00 0.01 C
ATOM 22 P G B1249 -63.907 -74.729 19.131 1.00 0.01 P
ATOM 23 OP1 G B1249 -62.925 -73.699 18.818 1.00 0.01 O
ATOM 24 OP2 G B1249 -63.495 -76.130 19.060 1.00 0.01 O
ATOM 25 O5' G B1249 -64.575 -74.450 20.512 1.00 0.01 O
TER
Atoms:
OP1: (-76.229,-66.220,12.064)
OP2: (-76.278,-64.010,13.299)
C3': (-72.358,-67.724,11.057)
C1': (-72.284,-68.113,13.435)
C5': (-73.378,-65.395,11.299)
O6: (-74.746,-71.781,17.476)
O4': (-72.834,-66.854,13.171)
C8: (-74.579,-68.989,14.262)
C2: (-71.496,-70.848,16.673)
C6: (-73.864,-71.187,16.875)
C5: (-73.977,-70.268,15.817)
C4: (-72.839,-69.740,15.297)
P: (-75.745,-64.829,12.220)
C4': (-72.436,-66.436,11.848)
C2': (-71.936,-68.769,12.095)
O2': (-70.549,-68.965,12.037)
N1: (-72.574,-71.421,17.257)
N2: (-70.296,-71.185,17.168)
N3: (-71.571,-69.990,15.684)
N7: (-75.085,-69.792,15.156)
N9: (-73.220,-68.913,14.260)
O5': (-74.163,-64.814,12.306)
O3': (-71.446,-67.615,9.993)
OP2: (-76.278,-64.010,13.299)
C3': (-72.358,-67.724,11.057)
C1': (-72.284,-68.113,13.435)
C5': (-73.378,-65.395,11.299)
O6: (-74.746,-71.781,17.476)
O4': (-72.834,-66.854,13.171)
C8: (-74.579,-68.989,14.262)
C2: (-71.496,-70.848,16.673)
C6: (-73.864,-71.187,16.875)
C5: (-73.977,-70.268,15.817)
C4: (-72.839,-69.740,15.297)
P: (-75.745,-64.829,12.220)
C4': (-72.436,-66.436,11.848)
C2': (-71.936,-68.769,12.095)
O2': (-70.549,-68.965,12.037)
N1: (-72.574,-71.421,17.257)
N2: (-70.296,-71.185,17.168)
N3: (-71.571,-69.990,15.684)
N7: (-75.085,-69.792,15.156)
N9: (-73.220,-68.913,14.260)
O5': (-74.163,-64.814,12.306)
O3': (-71.446,-67.615,9.993)
C4: (-66.574,-67.621,18.022)
N3: (-66.164,-68.041,16.819)
OP1: (-68.421,-72.759,22.043)
OP2: (-69.554,-71.959,19.961)
C2: (-66.151,-69.320,16.391)
C1': (-66.563,-71.568,16.778)
C3': (-65.867,-73.364,18.158)
O5': (-67.958,-73.869,19.890)
O4': (-67.667,-72.272,17.251)
C5': (-68.241,-74.200,18.558)
P: (-68.986,-73.058,20.752)
C4': (-67.249,-73.583,17.620)
C2': (-65.315,-72.297,17.228)
O2': (-64.727,-72.872,16.102)
N1: (-66.608,-70.209,17.272)
O4: (-66.541,-66.469,18.284)
O2: (-65.760,-69.713,15.324)
C6: (-67.011,-69.829,18.500)
C5: (-67.010,-68.578,18.900)
O3': (-65.118,-74.539,18.146)
N3: (-66.164,-68.041,16.819)
OP1: (-68.421,-72.759,22.043)
OP2: (-69.554,-71.959,19.961)
C2: (-66.151,-69.320,16.391)
C1': (-66.563,-71.568,16.778)
C3': (-65.867,-73.364,18.158)
O5': (-67.958,-73.869,19.890)
O4': (-67.667,-72.272,17.251)
C5': (-68.241,-74.200,18.558)
P: (-68.986,-73.058,20.752)
C4': (-67.249,-73.583,17.620)
C2': (-65.315,-72.297,17.228)
O2': (-64.727,-72.872,16.102)
N1: (-66.608,-70.209,17.272)
O4: (-66.541,-66.469,18.284)
O2: (-65.760,-69.713,15.324)
C6: (-67.011,-69.829,18.500)
C5: (-67.010,-68.578,18.900)
O3': (-65.118,-74.539,18.146)
Image (generated by PyMOL):