Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1113:A1012
Extra
PDB:
ATOM 1 O3' U A1112 -101.788 109.856 177.954 1.00 25.63 O
ATOM 2 P G A1113 -100.214 109.551 178.035 1.00 20.72 P
ATOM 3 OP1 G A1113 -99.530 110.879 178.096 1.00 20.72 O
ATOM 4 OP2 G A1113 -99.881 108.608 176.924 1.00 20.72 O
ATOM 5 O5' G A1113 -100.067 108.794 179.430 1.00 20.72 O
ATOM 6 C5' G A1113 -100.631 109.335 180.616 1.00 20.72 C
ATOM 7 C4' G A1113 -100.126 108.615 181.826 1.00 20.72 C
ATOM 8 O4' G A1113 -100.886 107.394 182.033 1.00 20.72 O
ATOM 9 C3' G A1113 -98.706 108.128 181.723 1.00 20.72 C
ATOM 10 O3' G A1113 -97.761 109.151 181.905 1.00 20.72 O
ATOM 11 C2' G A1113 -98.658 107.013 182.764 1.00 20.72 C
ATOM 12 O2' G A1113 -98.585 107.533 184.088 1.00 20.72 O
ATOM 13 C1' G A1113 -100.036 106.384 182.558 1.00 20.72 C
ATOM 14 N9 G A1113 -99.980 105.263 181.601 1.00 19.48 N
ATOM 15 C8 G A1113 -100.289 105.218 180.271 1.00 19.48 C
ATOM 16 N7 G A1113 -100.096 104.029 179.758 1.00 19.48 N
ATOM 17 C5 G A1113 -99.629 103.259 180.798 1.00 19.48 C
ATOM 18 C6 G A1113 -99.245 101.909 180.855 1.00 19.48 C
ATOM 19 O6 G A1113 -99.228 101.082 179.964 1.00 19.48 O
ATOM 20 N1 G A1113 -98.831 101.563 182.109 1.00 19.48 N
ATOM 21 C2 G A1113 -98.810 102.411 183.170 1.00 19.48 C
ATOM 22 N2 G A1113 -98.384 101.895 184.324 1.00 19.48 N
ATOM 23 N3 G A1113 -99.170 103.674 183.148 1.00 19.48 N
ATOM 24 C4 G A1113 -99.556 104.020 181.928 1.00 19.48 C
ATOM 25 P C A1114 -96.353 109.059 181.154 1.00 4.91 P
ATOM 26 OP1 C A1114 -95.596 110.297 181.508 1.00 4.91 O
ATOM 27 OP2 C A1114 -96.632 108.760 179.711 1.00 4.91 O
ATOM 28 O5' C A1114 -95.682 107.793 181.851 1.00 4.91 O
TER
ATOM 1 O3' U B1011 -98.620 101.488 187.108 1.00 16.35 O
ATOM 2 P U B1012 -97.933 100.042 187.025 1.00 13.41 P
ATOM 3 OP1 U B1012 -98.315 99.443 185.741 1.00 13.41 O
ATOM 4 OP2 U B1012 -98.279 99.313 188.279 1.00 13.41 O
ATOM 5 O5' U B1012 -96.385 100.396 187.020 1.00 13.41 O
ATOM 6 C5' U B1012 -95.785 101.144 185.977 1.00 13.41 C
ATOM 7 C4' U B1012 -94.306 101.245 186.206 1.00 13.41 C
ATOM 8 O4' U B1012 -94.039 102.090 187.361 1.00 13.41 O
ATOM 9 C3' U B1012 -93.626 99.929 186.538 1.00 13.41 C
ATOM 10 O3' U B1012 -93.308 99.175 185.383 1.00 13.41 O
ATOM 11 C2' U B1012 -92.409 100.342 187.365 1.00 13.41 C
ATOM 12 O2' U B1012 -91.296 100.634 186.541 1.00 13.41 O
ATOM 13 C1' U B1012 -92.880 101.634 188.037 1.00 13.41 C
ATOM 14 N1 U B1012 -93.186 101.441 189.498 1.00 13.64 N
ATOM 15 C2 U B1012 -92.228 100.880 190.359 1.00 13.64 C
ATOM 16 O2 U B1012 -91.115 100.494 190.044 1.00 13.64 O
ATOM 17 N3 U B1012 -92.585 100.757 191.664 1.00 13.64 N
ATOM 18 C4 U B1012 -93.767 101.137 192.229 1.00 13.64 C
ATOM 19 O4 U B1012 -93.935 100.948 193.438 1.00 13.64 O
ATOM 20 C5 U B1012 -94.702 101.721 191.323 1.00 13.64 C
ATOM 21 C6 U B1012 -94.387 101.847 190.031 1.00 13.64 C
ATOM 22 P A B1013 -93.519 97.586 185.377 1.00 19.29 P
ATOM 23 OP1 A B1013 -93.597 97.151 183.961 1.00 19.29 O
ATOM 24 OP2 A B1013 -94.654 97.298 186.265 1.00 19.29 O
ATOM 25 O5' A B1013 -92.173 97.052 186.031 1.00 19.29 O
TER
ATOM 2 P G A1113 -100.214 109.551 178.035 1.00 20.72 P
ATOM 3 OP1 G A1113 -99.530 110.879 178.096 1.00 20.72 O
ATOM 4 OP2 G A1113 -99.881 108.608 176.924 1.00 20.72 O
ATOM 5 O5' G A1113 -100.067 108.794 179.430 1.00 20.72 O
ATOM 6 C5' G A1113 -100.631 109.335 180.616 1.00 20.72 C
ATOM 7 C4' G A1113 -100.126 108.615 181.826 1.00 20.72 C
ATOM 8 O4' G A1113 -100.886 107.394 182.033 1.00 20.72 O
ATOM 9 C3' G A1113 -98.706 108.128 181.723 1.00 20.72 C
ATOM 10 O3' G A1113 -97.761 109.151 181.905 1.00 20.72 O
ATOM 11 C2' G A1113 -98.658 107.013 182.764 1.00 20.72 C
ATOM 12 O2' G A1113 -98.585 107.533 184.088 1.00 20.72 O
ATOM 13 C1' G A1113 -100.036 106.384 182.558 1.00 20.72 C
ATOM 14 N9 G A1113 -99.980 105.263 181.601 1.00 19.48 N
ATOM 15 C8 G A1113 -100.289 105.218 180.271 1.00 19.48 C
ATOM 16 N7 G A1113 -100.096 104.029 179.758 1.00 19.48 N
ATOM 17 C5 G A1113 -99.629 103.259 180.798 1.00 19.48 C
ATOM 18 C6 G A1113 -99.245 101.909 180.855 1.00 19.48 C
ATOM 19 O6 G A1113 -99.228 101.082 179.964 1.00 19.48 O
ATOM 20 N1 G A1113 -98.831 101.563 182.109 1.00 19.48 N
ATOM 21 C2 G A1113 -98.810 102.411 183.170 1.00 19.48 C
ATOM 22 N2 G A1113 -98.384 101.895 184.324 1.00 19.48 N
ATOM 23 N3 G A1113 -99.170 103.674 183.148 1.00 19.48 N
ATOM 24 C4 G A1113 -99.556 104.020 181.928 1.00 19.48 C
ATOM 25 P C A1114 -96.353 109.059 181.154 1.00 4.91 P
ATOM 26 OP1 C A1114 -95.596 110.297 181.508 1.00 4.91 O
ATOM 27 OP2 C A1114 -96.632 108.760 179.711 1.00 4.91 O
ATOM 28 O5' C A1114 -95.682 107.793 181.851 1.00 4.91 O
TER
ATOM 1 O3' U B1011 -98.620 101.488 187.108 1.00 16.35 O
ATOM 2 P U B1012 -97.933 100.042 187.025 1.00 13.41 P
ATOM 3 OP1 U B1012 -98.315 99.443 185.741 1.00 13.41 O
ATOM 4 OP2 U B1012 -98.279 99.313 188.279 1.00 13.41 O
ATOM 5 O5' U B1012 -96.385 100.396 187.020 1.00 13.41 O
ATOM 6 C5' U B1012 -95.785 101.144 185.977 1.00 13.41 C
ATOM 7 C4' U B1012 -94.306 101.245 186.206 1.00 13.41 C
ATOM 8 O4' U B1012 -94.039 102.090 187.361 1.00 13.41 O
ATOM 9 C3' U B1012 -93.626 99.929 186.538 1.00 13.41 C
ATOM 10 O3' U B1012 -93.308 99.175 185.383 1.00 13.41 O
ATOM 11 C2' U B1012 -92.409 100.342 187.365 1.00 13.41 C
ATOM 12 O2' U B1012 -91.296 100.634 186.541 1.00 13.41 O
ATOM 13 C1' U B1012 -92.880 101.634 188.037 1.00 13.41 C
ATOM 14 N1 U B1012 -93.186 101.441 189.498 1.00 13.64 N
ATOM 15 C2 U B1012 -92.228 100.880 190.359 1.00 13.64 C
ATOM 16 O2 U B1012 -91.115 100.494 190.044 1.00 13.64 O
ATOM 17 N3 U B1012 -92.585 100.757 191.664 1.00 13.64 N
ATOM 18 C4 U B1012 -93.767 101.137 192.229 1.00 13.64 C
ATOM 19 O4 U B1012 -93.935 100.948 193.438 1.00 13.64 O
ATOM 20 C5 U B1012 -94.702 101.721 191.323 1.00 13.64 C
ATOM 21 C6 U B1012 -94.387 101.847 190.031 1.00 13.64 C
ATOM 22 P A B1013 -93.519 97.586 185.377 1.00 19.29 P
ATOM 23 OP1 A B1013 -93.597 97.151 183.961 1.00 19.29 O
ATOM 24 OP2 A B1013 -94.654 97.298 186.265 1.00 19.29 O
ATOM 25 O5' A B1013 -92.173 97.052 186.031 1.00 19.29 O
TER
Atoms:
OP1: (-99.530,110.879,178.096)
OP2: (-99.881,108.608,176.924)
C3': (-98.706,108.128,181.723)
C1': (-100.036,106.384,182.558)
C5': (-100.631,109.335,180.616)
O6: (-99.228,101.082,179.964)
O4': (-100.886,107.394,182.033)
C8: (-100.289,105.218,180.271)
C2: (-98.810,102.411,183.170)
C6: (-99.245,101.909,180.855)
C5: (-99.629,103.259,180.798)
C4: (-99.556,104.020,181.928)
P: (-100.214,109.551,178.035)
C4': (-100.126,108.615,181.826)
C2': (-98.658,107.013,182.764)
O2': (-98.585,107.533,184.088)
N1: (-98.831,101.563,182.109)
N2: (-98.384,101.895,184.324)
N3: (-99.170,103.674,183.148)
N7: (-100.096,104.029,179.758)
N9: (-99.980,105.263,181.601)
O5': (-100.067,108.794,179.430)
O3': (-97.761,109.151,181.905)
OP2: (-99.881,108.608,176.924)
C3': (-98.706,108.128,181.723)
C1': (-100.036,106.384,182.558)
C5': (-100.631,109.335,180.616)
O6: (-99.228,101.082,179.964)
O4': (-100.886,107.394,182.033)
C8: (-100.289,105.218,180.271)
C2: (-98.810,102.411,183.170)
C6: (-99.245,101.909,180.855)
C5: (-99.629,103.259,180.798)
C4: (-99.556,104.020,181.928)
P: (-100.214,109.551,178.035)
C4': (-100.126,108.615,181.826)
C2': (-98.658,107.013,182.764)
O2': (-98.585,107.533,184.088)
N1: (-98.831,101.563,182.109)
N2: (-98.384,101.895,184.324)
N3: (-99.170,103.674,183.148)
N7: (-100.096,104.029,179.758)
N9: (-99.980,105.263,181.601)
O5': (-100.067,108.794,179.430)
O3': (-97.761,109.151,181.905)
C4: (-93.767,101.137,192.229)
N3: (-92.585,100.757,191.664)
OP1: (-98.315,99.443,185.741)
OP2: (-98.279,99.313,188.279)
C2: (-92.228,100.880,190.359)
C1': (-92.880,101.634,188.037)
C3': (-93.626,99.929,186.538)
O5': (-96.385,100.396,187.020)
O4': (-94.039,102.090,187.361)
C5': (-95.785,101.144,185.977)
P: (-97.933,100.042,187.025)
C4': (-94.306,101.245,186.206)
C2': (-92.409,100.342,187.365)
O2': (-91.296,100.634,186.541)
N1: (-93.186,101.441,189.498)
O4: (-93.935,100.948,193.438)
O2: (-91.115,100.494,190.044)
C6: (-94.387,101.847,190.031)
C5: (-94.702,101.721,191.323)
O3': (-93.308,99.175,185.383)
N3: (-92.585,100.757,191.664)
OP1: (-98.315,99.443,185.741)
OP2: (-98.279,99.313,188.279)
C2: (-92.228,100.880,190.359)
C1': (-92.880,101.634,188.037)
C3': (-93.626,99.929,186.538)
O5': (-96.385,100.396,187.020)
O4': (-94.039,102.090,187.361)
C5': (-95.785,101.144,185.977)
P: (-97.933,100.042,187.025)
C4': (-94.306,101.245,186.206)
C2': (-92.409,100.342,187.365)
O2': (-91.296,100.634,186.541)
N1: (-93.186,101.441,189.498)
O4: (-93.935,100.948,193.438)
O2: (-91.115,100.494,190.044)
C6: (-94.387,101.847,190.031)
C5: (-94.702,101.721,191.323)
O3': (-93.308,99.175,185.383)
Image (generated by PyMOL):